RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 SPP1P10451 314 aa16.23■□□□□ 0.19
HDAC1-201ENST00000373548 CHRNB4P30926 498 aa16.23■□□□□ 0.19
HDAC1-201ENST00000373548 TCF23Q7RTU1 214 aa16.23■□□□□ 0.19
HDAC1-201ENST00000373548 STPG2Q8N412 459 aa16.23■□□□□ 0.19
HDAC1-201ENST00000373548 TCTEX1D1Q8N7M0 179 aa16.23■□□□□ 0.19
HDAC1-201ENST00000373548 RAB40CQ96S21 281 aa16.23■□□□□ 0.19
HDAC1-201ENST00000373548 NARFLQ9H6Q4 476 aa16.23■□□□□ 0.19
HDAC1-201ENST00000373548 SAP30LQ9HAJ7 183 aa16.23■□□□□ 0.19
HDAC1-201ENST00000373548 FAM212BQ9NTI7 297 aaPredicted RBP16.23■□□□□ 0.19
HDAC1-201ENST00000373548 LRRC30A6NM36 301 aa16.22■□□□□ 0.19
HDAC1-201ENST00000373548 SIGLEC5O15389 551 aa16.22■□□□□ 0.19
HDAC1-201ENST00000373548 G6PCP35575 357 aa16.22■□□□□ 0.19
HDAC1-201ENST00000373548 GPR12P47775 334 aa16.22■□□□□ 0.19
HDAC1-201ENST00000373548 UTF1Q5T230 341 aa16.22■□□□□ 0.19
HDAC1-201ENST00000373548 HSD17B11Q8NBQ5 300 aa16.22■□□□□ 0.19
HDAC1-201ENST00000373548 RNASE6Q93091 150 aaKnown RBP16.22■□□□□ 0.19
HDAC1-201ENST00000373548 SH3BGRL3Q9H299 93 aa16.22■□□□□ 0.19
HDAC1-201ENST00000373548 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.22■□□□□ 0.19
HDAC1-201ENST00000373548 SYNGR2O43760 224 aa16.22■□□□□ 0.19
HDAC1-201ENST00000373548 KRASP01116 189 aa16.22■□□□□ 0.19
HDAC1-201ENST00000373548 IGHV3-7P01780 117 aa16.22■□□□□ 0.19
HDAC1-201ENST00000373548 ID4P47928 161 aa16.22■□□□□ 0.19
HDAC1-201ENST00000373548 DYNLT3P51808 116 aa16.22■□□□□ 0.19
HDAC1-201ENST00000373548 ZNF134P52741 427 aa16.22■□□□□ 0.19
HDAC1-201ENST00000373548 BAXQ07812 192 aa16.22■□□□□ 0.19
HDAC1-201ENST00000373548 SWI5Q1ZZU3 235 aa16.22■□□□□ 0.19
HDAC1-201ENST00000373548 BPIFCQ8NFQ6 507 aa16.22■□□□□ 0.19
HDAC1-201ENST00000373548 OR5C1Q8NGR4 320 aa16.22■□□□□ 0.19
HDAC1-201ENST00000373548 LINC01560Q8TB33 94 aa16.22■□□□□ 0.19
HDAC1-201ENST00000373548 FAM216AQ8WUB2 273 aa16.22■□□□□ 0.19
HDAC1-201ENST00000373548 EGLN1Q9GZT9 426 aa16.22■□□□□ 0.19
HDAC1-201ENST00000373548 MMP26Q9NRE1 261 aa16.22■□□□□ 0.19
HDAC1-201ENST00000373548 COA4Q9NYJ1 87 aa16.22■□□□□ 0.19
HDAC1-201ENST00000373548 TRGV10A0A0A0MS01 117 aa16.21■□□□□ 0.19
HDAC1-201ENST00000373548 KBTBD11-OT1A0A1B0GTJ5 212 aa16.21■□□□□ 0.19
HDAC1-201ENST00000373548 H3BP45 60 aa16.21■□□□□ 0.19
HDAC1-201ENST00000373548 CLDN14O95500 239 aa16.21■□□□□ 0.19
HDAC1-201ENST00000373548 GRNP28799 593 aaKnown RBP16.21■□□□□ 0.19
HDAC1-201ENST00000373548 RPL23AP62750 156 aaKnown RBP16.21■□□□□ 0.19
HDAC1-201ENST00000373548 UQCC3Q6UW78 93 aa16.21■□□□□ 0.19
HDAC1-201ENST00000373548 TMEM217Q8N7C4 229 aa16.21■□□□□ 0.19
HDAC1-201ENST00000373548 IFI27L2Q9H2X8 130 aa16.21■□□□□ 0.19
HDAC1-201ENST00000373548 HRH4Q9H3N8 390 aa16.21■□□□□ 0.19
HDAC1-201ENST00000373548 CLN8Q9UBY8 286 aa16.21■□□□□ 0.19
HDAC1-201ENST00000373548 ARFGEF3Q5TH69 2177 aa16.21■□□□□ 0.19
HDAC1-201ENST00000373548 TXNL1O43396 289 aa16.21■□□□□ 0.18
HDAC1-201ENST00000373548 PLA2G5P39877 138 aa16.21■□□□□ 0.18
HDAC1-201ENST00000373548 ADORA2A-AS1P86434 159 aa16.21■□□□□ 0.18
HDAC1-201ENST00000373548 ZNF266Q14584 549 aa16.21■□□□□ 0.18
HDAC1-201ENST00000373548 KCNJ16Q9NPI9 418 aa16.21■□□□□ 0.18
HDAC1-201ENST00000373548 WSB1Q9Y6I7 421 aa16.21■□□□□ 0.18
HDAC1-201ENST00000373548 NUDT19A8MXV4 375 aa16.2■□□□□ 0.18
HDAC1-201ENST00000373548 TOR1AO14656 332 aa16.2■□□□□ 0.18
HDAC1-201ENST00000373548 CD3EP07766 207 aa16.2■□□□□ 0.18
HDAC1-201ENST00000373548 IAPPP10997 89 aa16.2■□□□□ 0.18
HDAC1-201ENST00000373548 DUTP33316 252 aaKnown RBP16.2■□□□□ 0.18
HDAC1-201ENST00000373548 BLOC1S1P78537 153 aa16.2■□□□□ 0.18
HDAC1-201ENST00000373548 NCR3LG1Q68D85 454 aa16.2■□□□□ 0.18
HDAC1-201ENST00000373548 RAB9BQ9NP90 201 aa16.2■□□□□ 0.18
HDAC1-201ENST00000373548 PARP11Q9NR21 331 aa16.2■□□□□ 0.18
HDAC1-201ENST00000373548 GFOD1Q9NXC2 390 aa16.2■□□□□ 0.18
HDAC1-201ENST00000373548 NUP50Q9UKX7 468 aa16.2■□□□□ 0.18
HDAC1-201ENST00000373548 TMEM178BH3BS89 294 aa16.19■□□□□ 0.18
HDAC1-201ENST00000373548 SLC31A2O15432 143 aa16.19■□□□□ 0.18
HDAC1-201ENST00000373548 CRYZL1O95825 349 aa16.19■□□□□ 0.18
HDAC1-201ENST00000373548 CDSNQ15517 529 aa16.19■□□□□ 0.18
HDAC1-201ENST00000373548 MIDNQ504T8 468 aa16.19■□□□□ 0.18
HDAC1-201ENST00000373548 BTNL8Q6UX41 500 aa16.19■□□□□ 0.18
HDAC1-201ENST00000373548 IL34Q6ZMJ4 242 aa16.19■□□□□ 0.18
HDAC1-201ENST00000373548 Q6ZRG5 221 aa16.19■□□□□ 0.18
HDAC1-201ENST00000373548 DYNLRB1Q9NP97 96 aa16.19■□□□□ 0.18
HDAC1-201ENST00000373548 NDRG3Q9UGV2 375 aa16.19■□□□□ 0.18
HDAC1-201ENST00000373548 TRAV38-1A0A0B4J264 116 aa16.19■□□□□ 0.18
HDAC1-201ENST00000373548 NKX6-3A6NJ46 265 aa16.19■□□□□ 0.18
HDAC1-201ENST00000373548 FAM90A26D6RGX4 464 aa16.19■□□□□ 0.18
HDAC1-201ENST00000373548 TMPRSS2O15393 492 aa16.19■□□□□ 0.18
HDAC1-201ENST00000373548 ATG12O94817 140 aa16.19■□□□□ 0.18
HDAC1-201ENST00000373548 PLAUP00749 431 aa16.19■□□□□ 0.18
HDAC1-201ENST00000373548 DANCRP0C864 163 aa16.19■□□□□ 0.18
HDAC1-201ENST00000373548 PJVKQ0ZLH3 352 aa16.19■□□□□ 0.18
HDAC1-201ENST00000373548 LEAP2Q969E1 77 aa16.19■□□□□ 0.18
HDAC1-201ENST00000373548 COQ3Q9NZJ6 369 aa16.19■□□□□ 0.18
HDAC1-201ENST00000373548 ITGB1BP1O14713 200 aa16.18■□□□□ 0.18
HDAC1-201ENST00000373548 APOBEC3AP31941 199 aaPredicted RBP16.18■□□□□ 0.18
HDAC1-201ENST00000373548 SULT1A1P50225 295 aa16.18■□□□□ 0.18
HDAC1-201ENST00000373548 TMEM267Q0VDI3 215 aaPredicted RBP16.18■□□□□ 0.18
HDAC1-201ENST00000373548 RPL39P5Q59GN2 51 aa16.18■□□□□ 0.18
HDAC1-201ENST00000373548 STX12Q86Y82 276 aa16.18■□□□□ 0.18
HDAC1-201ENST00000373548 C1orf87Q8N0U7 546 aa16.18■□□□□ 0.18
HDAC1-201ENST00000373548 PPIAL4EA0A075B759 164 aa16.18■□□□□ 0.18
HDAC1-201ENST00000373548 PPIAL4DF5H284 164 aa16.18■□□□□ 0.18
HDAC1-201ENST00000373548 M0R1X1 148 aa16.18■□□□□ 0.18
HDAC1-201ENST00000373548 PPIAL4FP0DN26 164 aa16.18■□□□□ 0.18
HDAC1-201ENST00000373548 SRSF3P84103 164 aaKnown RBP16.18■□□□□ 0.18
HDAC1-201ENST00000373548 AKR1C1Q04828 323 aa16.18■□□□□ 0.18
HDAC1-201ENST00000373548 EFNB3Q15768 340 aa16.18■□□□□ 0.18
HDAC1-201ENST00000373548 ZCCHC14Q8WYQ9 949 aaKnown RBP16.18■□□□□ 0.18
HDAC1-201ENST00000373548 CCL17Q92583 94 aa16.18■□□□□ 0.18
HDAC1-201ENST00000373548 CORO2AQ92828 525 aa16.18■□□□□ 0.18
HDAC1-201ENST00000373548 LINC00574Q9H8X3 128 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms