RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 FAM90A1Q86YD7 464 aa17.18■□□□□ 0.34
VEGFA-204ENST00000372064 UNKLQ9H9P5 680 aaKnown RBP17.18■□□□□ 0.34
VEGFA-204ENST00000372064 MAP1BP46821 2468 aaKnown RBP17.18■□□□□ 0.34
VEGFA-204ENST00000372064 SCAF4O95104 1147 aaKnown RBP17.17■□□□□ 0.34
VEGFA-204ENST00000372064 HSPB1P04792 205 aaKnown RBP17.17■□□□□ 0.34
VEGFA-204ENST00000372064 G6PCP35575 357 aa17.17■□□□□ 0.34
VEGFA-204ENST00000372064 RAB2AP61019 212 aa17.17■□□□□ 0.34
VEGFA-204ENST00000372064 SPRNQ5BIV9 151 aa17.17■□□□□ 0.34
VEGFA-204ENST00000372064 C1orf185Q5T7R7 199 aa17.17■□□□□ 0.34
VEGFA-204ENST00000372064 C17orf98A8MV24 154 aa17.17■□□□□ 0.34
VEGFA-204ENST00000372064 S1PR2O95136 353 aa17.17■□□□□ 0.34
VEGFA-204ENST00000372064 ZNF816Q0VGE8 651 aaPredicted RBP17.17■□□□□ 0.34
VEGFA-204ENST00000372064 EDDM3AQ14507 147 aa17.17■□□□□ 0.34
VEGFA-204ENST00000372064 HAGHQ16775 308 aa17.17■□□□□ 0.34
VEGFA-204ENST00000372064 EIF2S3LQ2VIR3 472 aaKnown RBP17.17■□□□□ 0.34
VEGFA-204ENST00000372064 C3orf36Q3SXR2 165 aa17.17■□□□□ 0.34
VEGFA-204ENST00000372064 RNF212Q495C1 297 aa17.17■□□□□ 0.34
VEGFA-204ENST00000372064 SPANXN5Q5MJ07 72 aa17.17■□□□□ 0.34
VEGFA-204ENST00000372064 ZNF66Q6ZN08 573 aa17.17■□□□□ 0.34
VEGFA-204ENST00000372064 AGMATQ9BSE5 352 aa17.17■□□□□ 0.34
VEGFA-204ENST00000372064 LRRC30A6NM36 301 aa17.17■□□□□ 0.34
VEGFA-204ENST00000372064 KRASP01116 189 aa17.17■□□□□ 0.34
VEGFA-204ENST00000372064 BTNL3Q6UXE8 466 aa17.17■□□□□ 0.34
VEGFA-204ENST00000372064 WDR61Q9GZS3 305 aaKnown RBP17.17■□□□□ 0.34
VEGFA-204ENST00000372064 IGKV1D-17A0A075B6S4 117 aa17.16■□□□□ 0.34
VEGFA-204ENST00000372064 IGHV3-13P01766 116 aa17.16■□□□□ 0.34
VEGFA-204ENST00000372064 MT-ND4LP03901 98 aa17.16■□□□□ 0.34
VEGFA-204ENST00000372064 ADH4P08319 380 aa17.16■□□□□ 0.34
VEGFA-204ENST00000372064 VHLLQ6RSH7 139 aa17.16■□□□□ 0.34
VEGFA-204ENST00000372064 TCTEX1D2Q8WW35 142 aa17.16■□□□□ 0.34
VEGFA-204ENST00000372064 RPRMQ9NS64 109 aa17.16■□□□□ 0.34
VEGFA-204ENST00000372064 GVINP1Q7Z2Y8 2422 aa17.16■□□□□ 0.34
VEGFA-204ENST00000372064 ODAMA1E959 279 aa17.16■□□□□ 0.34
VEGFA-204ENST00000372064 DEFB108AA8MXU0 73 aa17.16■□□□□ 0.34
VEGFA-204ENST00000372064 CLDN14O95500 239 aa17.16■□□□□ 0.34
VEGFA-204ENST00000372064 SERF2P84101 59 aa17.16■□□□□ 0.34
VEGFA-204ENST00000372064 LILRB2Q8N423 598 aa17.16■□□□□ 0.34
VEGFA-204ENST00000372064 BIN3Q9NQY0 253 aa17.16■□□□□ 0.34
VEGFA-204ENST00000372064 SPINT2O43291 252 aa17.15■□□□□ 0.34
VEGFA-204ENST00000372064 CLDN1O95832 211 aa17.15■□□□□ 0.34
VEGFA-204ENST00000372064 HSD17B10Q99714 261 aaKnown RBP17.15■□□□□ 0.34
VEGFA-204ENST00000372064 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.15■□□□□ 0.34
VEGFA-204ENST00000372064 CRYAAP02489 173 aa17.15■□□□□ 0.34
VEGFA-204ENST00000372064 DAOP14920 347 aa17.15■□□□□ 0.34
VEGFA-204ENST00000372064 LINC00205P59089 165 aa17.15■□□□□ 0.34
VEGFA-204ENST00000372064 HABP2Q14520 560 aaPredicted RBP17.15■□□□□ 0.34
VEGFA-204ENST00000372064 CR1LQ2VPA4 569 aa17.15■□□□□ 0.34
VEGFA-204ENST00000372064 KHDC3LQ587J8 217 aa17.15■□□□□ 0.34
VEGFA-204ENST00000372064 MBD3L1Q8WWY6 194 aa17.15■□□□□ 0.34
VEGFA-204ENST00000372064 OR4C12Q96R67 309 aa17.15■□□□□ 0.34
VEGFA-204ENST00000372064 RAB29O14966 203 aa17.14■□□□□ 0.33
VEGFA-204ENST00000372064 NKX6-1P78426 367 aaPredicted RBP17.14■□□□□ 0.33
VEGFA-204ENST00000372064 LTC4SQ16873 150 aa17.14■□□□□ 0.33
VEGFA-204ENST00000372064 GCSAMQ8N6F7 178 aa17.14■□□□□ 0.33
VEGFA-204ENST00000372064 OR2V2Q96R30 315 aa17.14■□□□□ 0.33
VEGFA-204ENST00000372064 VSIRQ9H7M9 311 aa17.14■□□□□ 0.33
VEGFA-204ENST00000372064 LAMP3Q9UQV4 416 aa17.14■□□□□ 0.33
VEGFA-204ENST00000372064 IGHV3OR15-7A0A075B7D8 119 aa17.14■□□□□ 0.33
VEGFA-204ENST00000372064 LINC00473A8K010 186 aa17.14■□□□□ 0.33
VEGFA-204ENST00000372064 SLC38A11Q08AI6 406 aa17.14■□□□□ 0.33
VEGFA-204ENST00000372064 ZNF726P1Q15940 193 aa17.14■□□□□ 0.33
VEGFA-204ENST00000372064 LINC00518Q8N0U6 118 aa17.14■□□□□ 0.33
VEGFA-204ENST00000372064 FAM216AQ8WUB2 273 aa17.14■□□□□ 0.33
VEGFA-204ENST00000372064 PUS1Q9Y606 427 aaKnown RBP eCLIP17.14■□□□□ 0.33
VEGFA-204ENST00000372064 LOC102723971A0A1B0GUV8 181 aa17.14■□□□□ 0.33
VEGFA-204ENST00000372064 ST8SIA5O15466 376 aa17.14■□□□□ 0.33
VEGFA-204ENST00000372064 TIMP3P35625 211 aa17.14■□□□□ 0.33
VEGFA-204ENST00000372064 OR10G4Q8NGN3 311 aa17.14■□□□□ 0.33
VEGFA-204ENST00000372064 ISOC2Q96AB3 205 aa17.14■□□□□ 0.33
VEGFA-204ENST00000372064 MUCL1Q96DR8 90 aa17.14■□□□□ 0.33
VEGFA-204ENST00000372064 PSG11Q9UQ72 335 aa17.14■□□□□ 0.33
VEGFA-204ENST00000372064 PTAFRP25105 342 aa17.13■□□□□ 0.33
VEGFA-204ENST00000372064 GLRXP35754 106 aa17.13■□□□□ 0.33
VEGFA-204ENST00000372064 HOXA1P49639 335 aaPredicted RBP17.13■□□□□ 0.33
VEGFA-204ENST00000372064 SNX22Q96L94 193 aa17.13■□□□□ 0.33
VEGFA-204ENST00000372064 ICE1Q9Y2F5 2266 aa17.13■□□□□ 0.33
VEGFA-204ENST00000372064 NBEAQ8NFP9 2946 aa17.13■□□□□ 0.33
VEGFA-204ENST00000372064 MUC6Q6W4X9 2439 aa17.13■□□□□ 0.33
VEGFA-204ENST00000372064 A0A1W2PPH5 198 aa17.13■□□□□ 0.33
VEGFA-204ENST00000372064 H3BQ15 152 aa17.13■□□□□ 0.33
VEGFA-204ENST00000372064 SPRY3O43610 288 aa17.13■□□□□ 0.33
VEGFA-204ENST00000372064 CRYABP02511 175 aaKnown RBP17.13■□□□□ 0.33
VEGFA-204ENST00000372064 GZMHP20718 246 aa17.13■□□□□ 0.33
VEGFA-204ENST00000372064 KLF3P57682 345 aaPredicted RBP17.13■□□□□ 0.33
VEGFA-204ENST00000372064 MOGAT3Q86VF5 341 aa17.13■□□□□ 0.33
VEGFA-204ENST00000372064 TAF15Q92804 592 aaKnown RBP eCLIP17.13■□□□□ 0.33
VEGFA-204ENST00000372064 TIMM9Q9Y5J7 89 aa17.13■□□□□ 0.33
VEGFA-204ENST00000372064 RAB5BP61020 215 aa17.12■□□□□ 0.33
VEGFA-204ENST00000372064 Q3ZCU0 254 aa17.12■□□□□ 0.33
VEGFA-204ENST00000372064 C22orf34Q6ZV56 151 aa17.12■□□□□ 0.33
VEGFA-204ENST00000372064 CENPVQ7Z7K6 275 aaPredicted RBP17.12■□□□□ 0.33
VEGFA-204ENST00000372064 ZFP82Q8N141 532 aa17.12■□□□□ 0.33
VEGFA-204ENST00000372064 CYB561D1Q8N8Q1 229 aa17.12■□□□□ 0.33
VEGFA-204ENST00000372064 C2CD4CQ8TF44 421 aa17.12■□□□□ 0.33
VEGFA-204ENST00000372064 PLPPR2Q96GM1 343 aa17.12■□□□□ 0.33
VEGFA-204ENST00000372064 MEGF10Q96KG7 1140 aa17.12■□□□□ 0.33
VEGFA-204ENST00000372064 MRPL37Q9BZE1 423 aaKnown RBP17.12■□□□□ 0.33
VEGFA-204ENST00000372064 SPTBN2O15020 2390 aa17.12■□□□□ 0.33
VEGFA-204ENST00000372064 MGST3O14880 152 aa17.12■□□□□ 0.33
VEGFA-204ENST00000372064 LHBP01229 141 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms