RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 HLA-CQ95604 372 aa8.17□□□□□ -1.1
LRRC40-201ENST00000370952 LSM10Q969L4 123 aaKnown RBP8.17□□□□□ -1.1
LRRC40-201ENST00000370952 URB1O60287 2271 aaKnown RBP8.17□□□□□ -1.1
LRRC40-201ENST00000370952 TRAPPC2LH3BP13 241 aa8.17□□□□□ -1.1
LRRC40-201ENST00000370952 HYAL1Q12794 435 aa8.17□□□□□ -1.1
LRRC40-201ENST00000370952 C9orf135Q5VTT2 229 aa8.17□□□□□ -1.1
LRRC40-201ENST00000370952 TMEM14EPQ6UXP3 125 aa8.17□□□□□ -1.1
LRRC40-201ENST00000370952 Q6ZVH6 145 aa8.17□□□□□ -1.1
LRRC40-201ENST00000370952 NUFIP2Q7Z417 695 aaKnown RBP8.17□□□□□ -1.1
LRRC40-201ENST00000370952 CPEB3Q8NE35 698 aaKnown RBP8.17□□□□□ -1.1
LRRC40-201ENST00000370952 FOXB1Q99853 325 aa8.17□□□□□ -1.1
LRRC40-201ENST00000370952 ASCL3Q9NQ33 180 aa8.17□□□□□ -1.1
LRRC40-201ENST00000370952 NCKAP5O14513 1909 aa8.17□□□□□ -1.1
LRRC40-201ENST00000370952 VPS13AQ96RL7 3174 aa8.17□□□□□ -1.1
LRRC40-201ENST00000370952 TRAV38-1A0A0B4J264 116 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 A0A1W2PR77 199 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 ZIC3O60481 467 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 COX5AP20674 150 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 UBE2NP61088 152 aaKnown RBP8.16□□□□□ -1.1
LRRC40-201ENST00000370952 ANKRD39Q53RE8 183 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 ZNF709Q8N972 641 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 RNASE8Q8TDE3 154 aaKnown RBP8.16□□□□□ -1.1
LRRC40-201ENST00000370952 PSMF1Q92530 271 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 OR6C1Q96RD1 312 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 SAMD10Q9BYL1 202 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 TIMM9Q9Y5J7 89 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 TRBV20OR9-2A0A075B6H5 130 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 IGLV3-12A0A075B6K2 115 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 CRISP2P16562 243 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 KRTDAPP60985 99 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 MSMO1Q15800 293 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 COL5A1-AS1Q5SY13 56 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 AAED1Q7RTV5 226 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 BAGE3Q86Y29 109 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 BAGE2Q86Y30 109 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 FGFRL1Q8N441 504 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 MDFIC2A0A1B0GVS7 189 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 FAM90A10PA6NDY2 464 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 FAM90A18PA6NE21 464 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 FAM90A16PA6NEW6 464 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 FAM90A20PA6NIJ5 464 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 FAM90A8PA6NJQ4 464 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 FAM90A7PA6NKC0 464 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 FAM90A22PA8MWA6 464 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 FAM90A12PA8MX19 464 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 FAM90A5PA8MXJ8 464 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 FAM90A23PA8MXZ1 464 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 DKK1O94907 266 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 KRASP01116 189 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 FAM90A15PP0C7V4 464 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 FAM90A13PP0C7W8 464 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 FAM90A14PP0C7W9 464 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 FAM90A24PP0C7X0 464 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 CDC34P49427 236 aaPredicted RBP8.16□□□□□ -1.1
LRRC40-201ENST00000370952 COMPP49747 757 aaPredicted RBP8.16□□□□□ -1.1
LRRC40-201ENST00000370952 LHX2P50458 406 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 ZXDAP98168 799 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 SRSF7Q16629 238 aaKnown RBP eCLIP8.16□□□□□ -1.1
LRRC40-201ENST00000370952 MKXQ8IYA7 352 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 STPG4Q8N801 248 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 OR5AU1Q8NGC0 362 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 ZDHHC16Q969W1 377 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 SFRP2Q96HF1 295 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 CIB3Q96Q77 187 aaPredicted RBP8.16□□□□□ -1.1
LRRC40-201ENST00000370952 NPCDR1Q9BY65 106 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 FBXL7Q9UJT9 491 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 ZFP30Q9Y2G7 519 aa8.16□□□□□ -1.1
LRRC40-201ENST00000370952 TRAV24A0A0B4J272 114 aa8.15□□□□□ -1.1
LRRC40-201ENST00000370952 TRAV34A0A0B4J273 112 aa8.15□□□□□ -1.1
LRRC40-201ENST00000370952 IGHV1OR15-9A0A0B4J2B8 117 aa8.15□□□□□ -1.1
LRRC40-201ENST00000370952 SLC17A3O00476 420 aa8.15□□□□□ -1.1
LRRC40-201ENST00000370952 SCRG1O75711 98 aa8.15□□□□□ -1.1
LRRC40-201ENST00000370952 KITLGP21583 273 aa8.15□□□□□ -1.1
LRRC40-201ENST00000370952 COL8A2P25067 703 aa8.15□□□□□ -1.1
LRRC40-201ENST00000370952 G6PCP35575 357 aa8.15□□□□□ -1.1
LRRC40-201ENST00000370952 FOXL1Q12952 345 aa8.15□□□□□ -1.1
LRRC40-201ENST00000370952 FBXW9Q5XUX1 488 aa8.15□□□□□ -1.1
LRRC40-201ENST00000370952 YRDCQ86U90 279 aaKnown RBP8.15□□□□□ -1.1
LRRC40-201ENST00000370952 Q8NFD4 153 aa8.15□□□□□ -1.1
LRRC40-201ENST00000370952 BTF3L4Q96K17 158 aa8.15□□□□□ -1.1
LRRC40-201ENST00000370952 TMEM147Q9BVK8 224 aa8.15□□□□□ -1.1
LRRC40-201ENST00000370952 PARD6GQ9BYG4 376 aaPredicted RBP8.15□□□□□ -1.1
LRRC40-201ENST00000370952 MRPL18Q9H0U6 180 aaKnown RBP8.15□□□□□ -1.1
LRRC40-201ENST00000370952 R4GN57 208 aa8.15□□□□□ -1.1
LRRC40-201ENST00000370952 F6UZH7 168 aa8.15□□□□□ -1.11
LRRC40-201ENST00000370952 ZG16O60844 167 aa8.15□□□□□ -1.11
LRRC40-201ENST00000370952 RAMP3O60896 148 aa8.15□□□□□ -1.11
LRRC40-201ENST00000370952 CBR3O75828 277 aa8.15□□□□□ -1.11
LRRC40-201ENST00000370952 IGLV3-19P01714 112 aa8.15□□□□□ -1.11
LRRC40-201ENST00000370952 FKBP2P26885 142 aaKnown RBP8.15□□□□□ -1.11
LRRC40-201ENST00000370952 PAFAH1B2P68402 229 aa8.15□□□□□ -1.11
LRRC40-201ENST00000370952 ZNF90Q03938 601 aa8.15□□□□□ -1.11
LRRC40-201ENST00000370952 ZNF816Q0VGE8 651 aaPredicted RBP8.15□□□□□ -1.11
LRRC40-201ENST00000370952 KRTAP27-1Q3LI81 207 aa8.15□□□□□ -1.11
LRRC40-201ENST00000370952 SLC35E1Q96K37 410 aa8.15□□□□□ -1.11
LRRC40-201ENST00000370952 MTIF3Q9H2K0 278 aaKnown RBP8.15□□□□□ -1.11
LRRC40-201ENST00000370952 ZNF552Q9H707 407 aaPredicted RBP8.15□□□□□ -1.11
LRRC40-201ENST00000370952 TUBG2Q9NRH3 451 aa8.15□□□□□ -1.11
LRRC40-201ENST00000370952 ZNF391Q9UJN7 358 aa8.15□□□□□ -1.11
LRRC40-201ENST00000370952 NBEAQ8NFP9 2946 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms