RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 TIMM23O14925 209 aa12.5□□□□□ -0.41
PRPF38B-202ENST00000370022 IFNA6P05013 189 aa12.5□□□□□ -0.41
PRPF38B-202ENST00000370022 AADACP22760 399 aa12.5□□□□□ -0.41
PRPF38B-202ENST00000370022 RPL15P61313 204 aaKnown RBP12.5□□□□□ -0.41
PRPF38B-202ENST00000370022 TSPAN5P62079 268 aa12.5□□□□□ -0.41
PRPF38B-202ENST00000370022 MEF2DQ14814 521 aa12.5□□□□□ -0.41
PRPF38B-202ENST00000370022 MSMO1Q15800 293 aa12.5□□□□□ -0.41
PRPF38B-202ENST00000370022 KRTAP21-3Q3LHN1 58 aa12.5□□□□□ -0.41
PRPF38B-202ENST00000370022 ZNF660Q6AZW8 331 aaPredicted RBP12.5□□□□□ -0.41
PRPF38B-202ENST00000370022 STEAP1BQ6NZ63 245 aa12.5□□□□□ -0.41
PRPF38B-202ENST00000370022 MOB3BQ86TA1 216 aa12.5□□□□□ -0.41
PRPF38B-202ENST00000370022 PRIMA1Q86XR5 153 aa12.5□□□□□ -0.41
PRPF38B-202ENST00000370022 ARRDC1Q8N5I2 433 aa12.5□□□□□ -0.41
PRPF38B-202ENST00000370022 ZNF645Q8N7E2 425 aa12.5□□□□□ -0.41
PRPF38B-202ENST00000370022 S100ZQ8WXG8 99 aa12.5□□□□□ -0.41
PRPF38B-202ENST00000370022 CFHR4Q92496 578 aa12.5□□□□□ -0.41
PRPF38B-202ENST00000370022 BORCS5Q969J3 196 aa12.5□□□□□ -0.41
PRPF38B-202ENST00000370022 ZNF2Q9BSG1 426 aaPredicted RBP12.5□□□□□ -0.41
PRPF38B-202ENST00000370022 SRRQ9GZT4 340 aa12.5□□□□□ -0.41
PRPF38B-202ENST00000370022 TCF19Q9Y242 345 aa12.5□□□□□ -0.41
PRPF38B-202ENST00000370022 MXRA5Q9NR99 2828 aa12.5□□□□□ -0.41
PRPF38B-202ENST00000370022 ANKRD20A5PA0PJZ0 165 aa12.49□□□□□ -0.41
PRPF38B-202ENST00000370022 FAM90A9PA6NNJ1 464 aa12.49□□□□□ -0.41
PRPF38B-202ENST00000370022 RAB3DO95716 219 aa12.49□□□□□ -0.41
PRPF38B-202ENST00000370022 CD1BP29016 333 aa12.49□□□□□ -0.41
PRPF38B-202ENST00000370022 RAB13P51153 203 aa12.49□□□□□ -0.41
PRPF38B-202ENST00000370022 AP3S2P59780 193 aa12.49□□□□□ -0.41
PRPF38B-202ENST00000370022 HERV-K104P61576 105 aa12.49□□□□□ -0.41
PRPF38B-202ENST00000370022 RPL39P5Q59GN2 51 aa12.49□□□□□ -0.41
PRPF38B-202ENST00000370022 DRAM1Q8N682 238 aa12.49□□□□□ -0.41
PRPF38B-202ENST00000370022 OR56B4Q8NH76 319 aa12.49□□□□□ -0.41
PRPF38B-202ENST00000370022 DEDD2Q8WXF8 326 aa12.49□□□□□ -0.41
PRPF38B-202ENST00000370022 CHIAQ9BZP6 476 aa12.49□□□□□ -0.41
PRPF38B-202ENST00000370022 RAB18Q9NP72 206 aa12.49□□□□□ -0.41
PRPF38B-202ENST00000370022 SDHAF2Q9NX18 166 aa12.49□□□□□ -0.41
PRPF38B-202ENST00000370022 A0A1B0GVG6 124 aa12.48□□□□□ -0.41
PRPF38B-202ENST00000370022 AKAIN1P0CW23 69 aa12.48□□□□□ -0.41
PRPF38B-202ENST00000370022 C16orf87Q6PH81 154 aa12.48□□□□□ -0.41
PRPF38B-202ENST00000370022 ZBTB34Q8NCN2 500 aa12.48□□□□□ -0.41
PRPF38B-202ENST00000370022 TRIM63Q969Q1 353 aa12.48□□□□□ -0.41
PRPF38B-202ENST00000370022 MOB3AQ96BX8 217 aa12.48□□□□□ -0.41
PRPF38B-202ENST00000370022 DUX5Q96PT3 197 aa12.48□□□□□ -0.41
PRPF38B-202ENST00000370022 ARPC5LQ9BPX5 153 aa12.48□□□□□ -0.41
PRPF38B-202ENST00000370022 NABP2Q9BQ15 211 aa12.48□□□□□ -0.41
PRPF38B-202ENST00000370022 MRPL20Q9BYC9 149 aaKnown RBP12.48□□□□□ -0.41
PRPF38B-202ENST00000370022 AKIP1Q9NQ31 210 aa12.48□□□□□ -0.41
PRPF38B-202ENST00000370022 CUBNO60494 3623 aa12.48□□□□□ -0.41
PRPF38B-202ENST00000370022 IGKV1D-13A0A0B4J2D9 117 aa12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 OR5H14A6NHG9 310 aa12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 M0QYG6 137 aa12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 PROP1O75360 226 aa12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 CT45A6P0DMU7 189 aa12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 CT45A5P0DMU8 189 aa12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 CT45A7P0DMV0 189 aa12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 IGKV1-13P0DP09 117 aa12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 MC5RP33032 325 aa12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 CBX3Q13185 183 aa12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 LSAMPQ13449 338 aa12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 LPCAT3Q6P1A2 487 aa12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 C16orf82Q7Z2V1 217 aa12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 TOMM5Q8N4H5 51 aa12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 CAPSLQ8WWF8 208 aa12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 AKR1E2Q96JD6 320 aa12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 TINAGL1Q9GZM7 467 aaPredicted RBP12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 TNFRSF19Q9NS68 423 aa12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 A6NDX4 124 aa12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 J3QRK9 145 aa12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 M0R1X1 148 aa12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 SNRNP70P08621 437 aaKnown RBP12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 FAUP35544 74 aaKnown RBP12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 FXYD4P59646 89 aa12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 TAGLNQ01995 201 aaKnown RBP12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 EBI3Q14213 229 aa12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 MFSD4AQ8N468 514 aa12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 OR5AN1Q8NGI8 311 aa12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 OR2T10Q8NGZ9 312 aa12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 SECTM1Q8WVN6 248 aa12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 ADTRPQ96IZ2 230 aa12.47□□□□□ -0.41
PRPF38B-202ENST00000370022 DISC1C4P0D8 188 aa12.46□□□□□ -0.42
PRPF38B-202ENST00000370022 GPR137BO60478 399 aa12.46□□□□□ -0.42
PRPF38B-202ENST00000370022 PFDN1O60925 122 aa12.46□□□□□ -0.42
PRPF38B-202ENST00000370022 IGKV1D-33P01593 117 aa12.46□□□□□ -0.42
PRPF38B-202ENST00000370022 IGKV1-33P01594 117 aa12.46□□□□□ -0.42
PRPF38B-202ENST00000370022 IGLV2-14P01704 120 aa12.46□□□□□ -0.42
PRPF38B-202ENST00000370022 THBS3P49746 956 aa12.46□□□□□ -0.42
PRPF38B-202ENST00000370022 LY6EQ16553 131 aa12.46□□□□□ -0.42
PRPF38B-202ENST00000370022 TRIQKQ629K1 86 aa12.46□□□□□ -0.42
PRPF38B-202ENST00000370022 HSD17B10Q99714 261 aaKnown RBP12.46□□□□□ -0.42
PRPF38B-202ENST00000370022 SLC5A7Q9GZV3 580 aa12.46□□□□□ -0.42
PRPF38B-202ENST00000370022 OR2F2O95006 317 aa12.45□□□□□ -0.42
PRPF38B-202ENST00000370022 MOSP00540 346 aa12.45□□□□□ -0.42
PRPF38B-202ENST00000370022 AMY2AP04746 511 aa12.45□□□□□ -0.42
PRPF38B-202ENST00000370022 TMEM11P17152 192 aa12.45□□□□□ -0.42
PRPF38B-202ENST00000370022 CD24P25063 80 aa12.45□□□□□ -0.42
PRPF38B-202ENST00000370022 ECI1P42126 302 aa12.45□□□□□ -0.42
PRPF38B-202ENST00000370022 INPP1P49441 399 aa12.45□□□□□ -0.42
PRPF38B-202ENST00000370022 UCP3P55916 312 aa12.45□□□□□ -0.42
PRPF38B-202ENST00000370022 KLF9Q13886 244 aaPredicted RBP12.45□□□□□ -0.42
PRPF38B-202ENST00000370022 HES1Q14469 280 aa12.45□□□□□ -0.42
PRPF38B-202ENST00000370022 CCBE1Q6UXH8 406 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms