RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 CIB3Q96Q77 187 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-204ENST00000369530 FOXC2Q99958 501 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 NSD1Q96L73 2696 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-204ENST00000369530 TRGV5A0A0B4J1U4 118 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 IGHV2-26A0A0B4J1V2 119 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 SHISA9B4DS77 424 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 MAS1P04201 325 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 RPL12P30050 165 aaKnown RBP5.81□□□□□ -1.48
CSDE1-204ENST00000369530 RPL15P61313 204 aaKnown RBP5.81□□□□□ -1.48
CSDE1-204ENST00000369530 TDRG1Q3Y452 100 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 LRRC10Q5BKY1 277 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 LINC00346Q8IVM7 164 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 LRRC75A-AS1Q8N1F1 130 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 BHLHE23Q8NDY6 225 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 OR4C5Q8NGB2 326 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 GPX7Q96SL4 187 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-204ENST00000369530 P2RX4Q99571 388 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 WDR76Q9H967 626 aa5.81□□□□□ -1.48
CSDE1-204ENST00000369530 ITPR3Q14573 2671 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 INTS1Q8N201 2190 aaKnown RBP5.8□□□□□ -1.48
CSDE1-204ENST00000369530 MMP7P09237 267 aaPredicted RBP5.8□□□□□ -1.48
CSDE1-204ENST00000369530 IGLC2P0DOY2 106 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 IGLC3P0DOY3 106 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 EFNB2P52799 333 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 LCN2P80188 198 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 RNF151Q2KHN1 245 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 VAX1Q5SQQ9 334 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 OR4A47Q6IF82 309 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 FAM180AQ6UWF9 173 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 NPEPL1Q8NDH3 523 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 OR51G1Q8NGK1 321 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 CLDND2Q8NHS1 167 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 ZNRF4Q8WWF5 429 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 GPR132Q9UNW8 380 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 WIPI2Q9Y4P8 454 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 LOC102723971A0A1B0GUV8 181 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 IGLC7A0M8Q6 106 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 EEF1E1-BLOC1S5C9J1V9 151 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 ZG16O60844 167 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 SLC9A3R2Q15599 337 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 OR5L1Q8NGL2 311 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 NABP1Q96AH0 204 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 BTF3L4Q96K17 158 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 TSPAN32Q96QS1 320 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 C11orf1Q9H5F2 150 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 CLEC5AQ9NY25 188 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 COA3Q9Y2R0 106 aaPredicted RBP5.8□□□□□ -1.48
CSDE1-204ENST00000369530 LIPT2A6NK58 231 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 HLA-DOBP13765 273 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 ZNF43P17038 809 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 MSR1P21757 451 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 CTSSP25774 331 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 PPP1CCP36873 323 aaKnown RBP5.8□□□□□ -1.48
CSDE1-204ENST00000369530 CAMLGP49069 296 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 MTCP1P56278 107 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 CLRN1P58418 232 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 SUPT4H1P63272 117 aaKnown RBP5.8□□□□□ -1.48
CSDE1-204ENST00000369530 RAB32Q13637 225 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 ENDOGQ14249 297 aaKnown RBP5.8□□□□□ -1.48
CSDE1-204ENST00000369530 SNAI3Q3KNW1 292 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 TCTEX1D4Q5JR98 221 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 LDLRAD2Q5SZI1 272 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 PLXDC2Q6UX71 529 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 ADAD2Q8NCV1 583 aaKnown RBP5.8□□□□□ -1.48
CSDE1-204ENST00000369530 RARRES2Q99969 163 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 ELOVL3Q9HB03 270 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 Q9N2K0 584 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 FBLN5Q9UBX5 448 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 HIF3AQ9Y2N7 669 aa5.8□□□□□ -1.48
CSDE1-204ENST00000369530 ARPC3O15145 178 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 ABHD16AO95870 558 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 SCGB1D1O95968 90 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 P04436 131 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 FSTP19883 344 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 FCGR2CP31995 323 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 ASCL1P50553 236 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 RPL27P61353 136 aaKnown RBP5.79□□□□□ -1.48
CSDE1-204ENST00000369530 PAX2Q02962 417 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 FMODQ06828 376 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 EIF2B1Q14232 305 aaKnown RBP5.79□□□□□ -1.48
CSDE1-204ENST00000369530 ARL6IP1Q15041 203 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 LHFPL1Q86WI0 220 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 OR1K1Q8NGR3 316 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 MFSD8Q8NHS3 518 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 DVL3Q92997 716 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-204ENST00000369530 RNASE6Q93091 150 aaKnown RBP5.79□□□□□ -1.48
CSDE1-204ENST00000369530 PINX1Q96BK5 328 aaKnown RBP5.79□□□□□ -1.48
CSDE1-204ENST00000369530 CISD1Q9NZ45 108 aaKnown RBP5.79□□□□□ -1.48
CSDE1-204ENST00000369530 CLN8Q9UBY8 286 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 RBM7Q9Y580 266 aaKnown RBP5.79□□□□□ -1.48
CSDE1-204ENST00000369530 TMEM14AQ9Y6G1 99 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 DSCAML1Q8TD84 2053 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 FREM1Q5H8C1 2179 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 TRAV18A0A075B6X5 111 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 BORCS7-ASMTA0A0B4J1R7 106 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 MEGF11A6BM72 1044 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 VSTM5A8MXK1 200 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 MPZL1O95297 269 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 CYB5AP00167 134 aa5.79□□□□□ -1.48
CSDE1-204ENST00000369530 IGKV3-15P01624 115 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms