RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 LPCAT3Q6P1A2 487 aa8.18□□□□□ -1.1
TPM3-210ENST00000368530 LDLRAD3Q86YD5 345 aa8.18□□□□□ -1.1
TPM3-210ENST00000368530 CCDC71LQ8N9Z2 235 aa8.18□□□□□ -1.1
TPM3-210ENST00000368530 OR52L2PQ8NGH6 319 aa8.18□□□□□ -1.1
TPM3-210ENST00000368530 OR13A1Q8NGR1 328 aa8.18□□□□□ -1.1
TPM3-210ENST00000368530 ANGPTL6Q8NI99 470 aa8.18□□□□□ -1.1
TPM3-210ENST00000368530 Q8TCH9 128 aa8.18□□□□□ -1.1
TPM3-210ENST00000368530 ERGIC1Q969X5 290 aa8.18□□□□□ -1.1
TPM3-210ENST00000368530 SNX22Q96L94 193 aa8.18□□□□□ -1.1
TPM3-210ENST00000368530 CCL13Q99616 98 aa8.18□□□□□ -1.1
TPM3-210ENST00000368530 EGLN1Q9GZT9 426 aa8.18□□□□□ -1.1
TPM3-210ENST00000368530 COMMD9Q9P000 198 aa8.18□□□□□ -1.1
TPM3-210ENST00000368530 SHPKQ9UHJ6 478 aa8.18□□□□□ -1.1
TPM3-210ENST00000368530 OR2W1Q9Y3N9 320 aa8.18□□□□□ -1.1
TPM3-210ENST00000368530 RBM7Q9Y580 266 aaKnown RBP8.18□□□□□ -1.1
TPM3-210ENST00000368530 TRAV14DV4A0A0A6YYC5 116 aa8.17□□□□□ -1.1
TPM3-210ENST00000368530 OOEPA6NGQ2 149 aa8.17□□□□□ -1.1
TPM3-210ENST00000368530 LRRC30A6NM36 301 aa8.17□□□□□ -1.1
TPM3-210ENST00000368530 MPTX1A8MV57 137 aa8.17□□□□□ -1.1
TPM3-210ENST00000368530 GPR31O00270 319 aa8.17□□□□□ -1.1
TPM3-210ENST00000368530 MGST3O14880 152 aa8.17□□□□□ -1.1
TPM3-210ENST00000368530 ARPC5O15511 151 aa8.17□□□□□ -1.1
TPM3-210ENST00000368530 IGHV2-70P01814 119 aa8.17□□□□□ -1.1
TPM3-210ENST00000368530 HBZP02008 142 aa8.17□□□□□ -1.1
TPM3-210ENST00000368530 HLA-GP17693 338 aa8.17□□□□□ -1.1
TPM3-210ENST00000368530 SSTR5P35346 364 aa8.17□□□□□ -1.1
TPM3-210ENST00000368530 EDDM3BP56851 147 aa8.17□□□□□ -1.1
TPM3-210ENST00000368530 TMEM187Q14656 261 aa8.17□□□□□ -1.1
TPM3-210ENST00000368530 GNMTQ14749 295 aa8.17□□□□□ -1.1
TPM3-210ENST00000368530 PDLIM3Q53GG5 364 aaPredicted RBP8.17□□□□□ -1.1
TPM3-210ENST00000368530 C6orf183Q5T699 404 aa8.17□□□□□ -1.1
TPM3-210ENST00000368530 STUMQ69YW2 141 aa8.17□□□□□ -1.1
TPM3-210ENST00000368530 TBC1D26Q86UD7 250 aa8.17□□□□□ -1.1
TPM3-210ENST00000368530 FAM219AQ8IW50 185 aa8.17□□□□□ -1.1
TPM3-210ENST00000368530 FAM216BQ8N7L0 139 aa8.17□□□□□ -1.1
TPM3-210ENST00000368530 OR10V1Q8NGI7 309 aa8.17□□□□□ -1.1
TPM3-210ENST00000368530 RFESDQ8TAC1 157 aa8.17□□□□□ -1.1
TPM3-210ENST00000368530 PPP1R35Q8TAP8 253 aa8.17□□□□□ -1.1
TPM3-210ENST00000368530 TAF15Q92804 592 aaKnown RBP eCLIP8.17□□□□□ -1.1
TPM3-210ENST00000368530 TIMD4Q96H15 378 aa8.17□□□□□ -1.1
TPM3-210ENST00000368530 OR10C1Q96KK4 312 aa8.17□□□□□ -1.1
TPM3-210ENST00000368530 DUX5Q96PT3 197 aa8.17□□□□□ -1.1
TPM3-210ENST00000368530 TP53RKQ96S44 253 aa8.17□□□□□ -1.1
TPM3-210ENST00000368530 RAB18Q9NP72 206 aa8.17□□□□□ -1.1
TPM3-210ENST00000368530 KCNIP3Q9Y2W7 256 aa8.17□□□□□ -1.1
TPM3-210ENST00000368530 MAB21L2Q9Y586 359 aa8.17□□□□□ -1.1
TPM3-210ENST00000368530 IGHV3-43A0A0B4J1X8 118 aa8.16□□□□□ -1.1
TPM3-210ENST00000368530 C3orf85A0A1B0GTC6 90 aa8.16□□□□□ -1.1
TPM3-210ENST00000368530 ODAMA1E959 279 aa8.16□□□□□ -1.1
TPM3-210ENST00000368530 DNAJC9-AS1A6NH13 148 aa8.16□□□□□ -1.1
TPM3-210ENST00000368530 L7N2F9 121 aa8.16□□□□□ -1.1
TPM3-210ENST00000368530 MPPED1O15442 326 aa8.16□□□□□ -1.1
TPM3-210ENST00000368530 RGS11O94810 467 aa8.16□□□□□ -1.1
TPM3-210ENST00000368530 IGHV3-43DP0DP04 118 aa8.16□□□□□ -1.1
TPM3-210ENST00000368530 CXCL2P19875 107 aa8.16□□□□□ -1.1
TPM3-210ENST00000368530 PPP1CCP36873 323 aaKnown RBP8.16□□□□□ -1.1
TPM3-210ENST00000368530 LUMP51884 338 aaPredicted RBP8.16□□□□□ -1.1
TPM3-210ENST00000368530 PAX2Q02962 417 aa8.16□□□□□ -1.1
TPM3-210ENST00000368530 SRSF4Q08170 494 aaKnown RBP8.16□□□□□ -1.1
TPM3-210ENST00000368530 FGFRL1Q8N441 504 aa8.16□□□□□ -1.1
TPM3-210ENST00000368530 PPP1R1CQ8WVI7 109 aa8.16□□□□□ -1.1
TPM3-210ENST00000368530 ASB13Q8WXK3 278 aa8.16□□□□□ -1.1
TPM3-210ENST00000368530 ARL11Q969Q4 196 aa8.16□□□□□ -1.1
TPM3-210ENST00000368530 GALMQ96C23 342 aa8.16□□□□□ -1.1
TPM3-210ENST00000368530 GAFA1Q96PS6 74 aa8.16□□□□□ -1.1
TPM3-210ENST00000368530 GSKIPQ9P0R6 139 aa8.16□□□□□ -1.1
TPM3-210ENST00000368530 NUP50Q9UKX7 468 aa8.16□□□□□ -1.1
TPM3-210ENST00000368530 INSIG2Q9Y5U4 225 aa8.16□□□□□ -1.1
TPM3-210ENST00000368530 SOX21Q9Y651 276 aaPredicted RBP8.16□□□□□ -1.1
TPM3-210ENST00000368530 NKX6-3A6NJ46 265 aa8.15□□□□□ -1.1
TPM3-210ENST00000368530 A6NJY4 79 aa8.15□□□□□ -1.1
TPM3-210ENST00000368530 NPIPB11E5RHQ5 1161 aa8.15□□□□□ -1.1
TPM3-210ENST00000368530 F5H0A9 414 aaPredicted RBP8.15□□□□□ -1.1
TPM3-210ENST00000368530 K7N7A8 449 aa8.15□□□□□ -1.1
TPM3-210ENST00000368530 LGALS8O00214 317 aa8.15□□□□□ -1.1
TPM3-210ENST00000368530 FOXH1O75593 365 aa8.15□□□□□ -1.1
TPM3-210ENST00000368530 OR8U9P0C7N5 309 aa8.15□□□□□ -1.1
TPM3-210ENST00000368530 AP2S1P53680 142 aaPredicted RBP8.15□□□□□ -1.1
TPM3-210ENST00000368530 P2RX3P56373 397 aa8.15□□□□□ -1.1
TPM3-210ENST00000368530 DEFA6Q01524 100 aa8.15□□□□□ -1.1
TPM3-210ENST00000368530 GGNBP1Q5YKI7 109 aa8.15□□□□□ -1.1
TPM3-210ENST00000368530 TREML4Q6UXN2 200 aa8.15□□□□□ -1.1
TPM3-210ENST00000368530 FAM185AQ8N0U4 392 aa8.15□□□□□ -1.1
TPM3-210ENST00000368530 ZNF561Q8N587 486 aa8.15□□□□□ -1.1
TPM3-210ENST00000368530 OR8U1Q8NH10 309 aa8.15□□□□□ -1.1
TPM3-210ENST00000368530 LHFPL5Q8TAF8 219 aa8.15□□□□□ -1.1
TPM3-210ENST00000368530 SLA2Q9H6Q3 261 aa8.15□□□□□ -1.1
TPM3-210ENST00000368530 UNKLQ9H9P5 680 aaKnown RBP8.15□□□□□ -1.1
TPM3-210ENST00000368530 PATZ1Q9HBE1 687 aaKnown RBP8.15□□□□□ -1.1
TPM3-210ENST00000368530 RNF150Q9ULK6 438 aa8.15□□□□□ -1.1
TPM3-210ENST00000368530 UBE2J1Q9Y385 318 aaPredicted RBP8.15□□□□□ -1.1
TPM3-210ENST00000368530 A8MXK9 166 aa8.14□□□□□ -1.11
TPM3-210ENST00000368530 TMEM178BH3BS89 294 aa8.14□□□□□ -1.11
TPM3-210ENST00000368530 CLDN34H7C241 214 aa8.14□□□□□ -1.11
TPM3-210ENST00000368530 PGLYRP1O75594 196 aaPredicted RBP8.14□□□□□ -1.11
TPM3-210ENST00000368530 IFNA21P01568 189 aa8.14□□□□□ -1.11
TPM3-210ENST00000368530 RNASE1P07998 156 aaKnown RBP8.14□□□□□ -1.11
TPM3-210ENST00000368530 MUC1P15941 1255 aaPredicted RBP8.14□□□□□ -1.11
TPM3-210ENST00000368530 S100A10P60903 97 aa8.14□□□□□ -1.11
TPM3-210ENST00000368530 RND3P61587 244 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms