RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 LINC01548A6NM66 108 aa17.75■□□□□ 0.43
ECHDC1-203ENST00000368291 GPR12P47775 334 aa17.75■□□□□ 0.43
ECHDC1-203ENST00000368291 ACTBP60709 375 aa17.75■□□□□ 0.43
ECHDC1-203ENST00000368291 CNIH2Q6PI25 160 aa17.75■□□□□ 0.43
ECHDC1-203ENST00000368291 C10orf99Q6UWK7 81 aa17.75■□□□□ 0.43
ECHDC1-203ENST00000368291 HOGA1Q86XE5 327 aa17.75■□□□□ 0.43
ECHDC1-203ENST00000368291 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.75■□□□□ 0.43
ECHDC1-203ENST00000368291 CMTM3Q96MX0 182 aa17.75■□□□□ 0.43
ECHDC1-203ENST00000368291 SDHAF2Q9NX18 166 aa17.75■□□□□ 0.43
ECHDC1-203ENST00000368291 FBN3Q75N90 2809 aa17.74■□□□□ 0.43
ECHDC1-203ENST00000368291 OR5H14A6NHG9 310 aa17.74■□□□□ 0.43
ECHDC1-203ENST00000368291 PEX14O75381 377 aa17.74■□□□□ 0.43
ECHDC1-203ENST00000368291 CTXN2P0C2S0 81 aa17.74■□□□□ 0.43
ECHDC1-203ENST00000368291 RPL5P46777 297 aaKnown RBP17.74■□□□□ 0.43
ECHDC1-203ENST00000368291 TAS2R20P59543 309 aa17.74■□□□□ 0.43
ECHDC1-203ENST00000368291 SPCS2Q15005 226 aa17.74■□□□□ 0.43
ECHDC1-203ENST00000368291 CLVS1Q8IUQ0 354 aaPredicted RBP17.74■□□□□ 0.43
ECHDC1-203ENST00000368291 ZNF383Q8NA42 475 aa17.74■□□□□ 0.43
ECHDC1-203ENST00000368291 BEST4Q8NFU0 473 aa17.74■□□□□ 0.43
ECHDC1-203ENST00000368291 ACOT12Q8WYK0 555 aa17.74■□□□□ 0.43
ECHDC1-203ENST00000368291 FBXO24O75426 580 aa17.73■□□□□ 0.43
ECHDC1-203ENST00000368291 APOA1P02647 267 aa17.73■□□□□ 0.43
ECHDC1-203ENST00000368291 MMDQ15546 238 aa17.73■□□□□ 0.43
ECHDC1-203ENST00000368291 TMEM69Q5SWH9 247 aa17.73■□□□□ 0.43
ECHDC1-203ENST00000368291 OR5AU1Q8NGC0 362 aa17.73■□□□□ 0.43
ECHDC1-203ENST00000368291 SNAPC3Q92966 411 aa17.73■□□□□ 0.43
ECHDC1-203ENST00000368291 NOL4LQ96MY1 436 aaPredicted RBP17.73■□□□□ 0.43
ECHDC1-203ENST00000368291 VWFP04275 2813 aa17.72■□□□□ 0.43
ECHDC1-203ENST00000368291 MEIS3P1A6NDR6 274 aa17.72■□□□□ 0.43
ECHDC1-203ENST00000368291 M0QZ24 198 aa17.72■□□□□ 0.43
ECHDC1-203ENST00000368291 HPGDSO60760 199 aa17.72■□□□□ 0.43
ECHDC1-203ENST00000368291 HLA-DQB1P01920 261 aa17.72■□□□□ 0.43
ECHDC1-203ENST00000368291 ZNF182P17025 639 aaPredicted RBP17.72■□□□□ 0.43
ECHDC1-203ENST00000368291 ELK1P19419 428 aa17.72■□□□□ 0.43
ECHDC1-203ENST00000368291 NFYAP23511 347 aaPredicted RBP17.72■□□□□ 0.43
ECHDC1-203ENST00000368291 MC5RP33032 325 aa17.72■□□□□ 0.43
ECHDC1-203ENST00000368291 TCTEX1D4Q5JR98 221 aa17.72■□□□□ 0.43
ECHDC1-203ENST00000368291 SLC35E3Q7Z769 313 aa17.72■□□□□ 0.43
ECHDC1-203ENST00000368291 CENPVQ7Z7K6 275 aaPredicted RBP17.72■□□□□ 0.43
ECHDC1-203ENST00000368291 NPBQ8NG41 125 aa17.72■□□□□ 0.43
ECHDC1-203ENST00000368291 RASL11BQ9BPW5 248 aa17.72■□□□□ 0.43
ECHDC1-203ENST00000368291 HSPB9Q9BQS6 159 aa17.72■□□□□ 0.43
ECHDC1-203ENST00000368291 WASHC3Q9Y3C0 194 aa17.72■□□□□ 0.43
ECHDC1-203ENST00000368291 ADARB2-AS1A8MUL3 147 aa17.71■□□□□ 0.43
ECHDC1-203ENST00000368291 M0R1X1 148 aa17.71■□□□□ 0.43
ECHDC1-203ENST00000368291 NDUFA3O95167 84 aa17.71■□□□□ 0.43
ECHDC1-203ENST00000368291 TSPAN15O95858 294 aa17.71■□□□□ 0.43
ECHDC1-203ENST00000368291 FCER2P06734 321 aa17.71■□□□□ 0.43
ECHDC1-203ENST00000368291 RAB2BQ8WUD1 216 aa17.71■□□□□ 0.43
ECHDC1-203ENST00000368291 CITED2Q99967 270 aaPredicted RBP17.71■□□□□ 0.43
ECHDC1-203ENST00000368291 LINC00527Q9UJ94 153 aa17.71■□□□□ 0.43
ECHDC1-203ENST00000368291 ANAPC10Q9UM13 185 aa17.71■□□□□ 0.43
ECHDC1-203ENST00000368291 OR2W1Q9Y3N9 320 aa17.71■□□□□ 0.43
ECHDC1-203ENST00000368291 NBR2O15453 112 aa17.7■□□□□ 0.42
ECHDC1-203ENST00000368291 TUSC2O75896 110 aa17.7■□□□□ 0.42
ECHDC1-203ENST00000368291 CBX5P45973 191 aa17.7■□□□□ 0.42
ECHDC1-203ENST00000368291 TMBIM6P55061 237 aa17.7■□□□□ 0.42
ECHDC1-203ENST00000368291 CD83Q01151 205 aa17.7■□□□□ 0.42
ECHDC1-203ENST00000368291 TREML4Q6UXN2 200 aa17.7■□□□□ 0.42
ECHDC1-203ENST00000368291 RBM7Q9Y580 266 aaKnown RBP17.7■□□□□ 0.42
ECHDC1-203ENST00000368291 IGKV1D-13A0A0B4J2D9 117 aa17.69■□□□□ 0.42
ECHDC1-203ENST00000368291 H7C2Y5 167 aa17.69■□□□□ 0.42
ECHDC1-203ENST00000368291 J3QRK9 145 aa17.69■□□□□ 0.42
ECHDC1-203ENST00000368291 IGKV1-16P04430 117 aa17.69■□□□□ 0.42
ECHDC1-203ENST00000368291 IGKV1-13P0DP09 117 aa17.69■□□□□ 0.42
ECHDC1-203ENST00000368291 BCL7BQ9BQE9 202 aa17.69■□□□□ 0.42
ECHDC1-203ENST00000368291 ZNF107Q9UII5 783 aaPredicted RBP17.69■□□□□ 0.42
ECHDC1-203ENST00000368291 MGAM2Q2M2H8 2515 aa17.68■□□□□ 0.42
ECHDC1-203ENST00000368291 IGLV2-14P01704 120 aa17.68■□□□□ 0.42
ECHDC1-203ENST00000368291 SOX6P35712 828 aa17.68■□□□□ 0.42
ECHDC1-203ENST00000368291 ARPC4P59998 168 aa17.68■□□□□ 0.42
ECHDC1-203ENST00000368291 C5orf64Q2M2E5 130 aa17.68■□□□□ 0.42
ECHDC1-203ENST00000368291 C2orf68Q2NKX9 166 aa17.68■□□□□ 0.42
ECHDC1-203ENST00000368291 MZT2AQ6P582 158 aa17.68■□□□□ 0.42
ECHDC1-203ENST00000368291 STPG2Q8N412 459 aa17.68■□□□□ 0.42
ECHDC1-203ENST00000368291 AP3S1Q92572 193 aa17.68■□□□□ 0.42
ECHDC1-203ENST00000368291 NBEAL1Q6ZS30 2694 aa17.67■□□□□ 0.42
ECHDC1-203ENST00000368291 PSMB11A5LHX3 300 aa17.67■□□□□ 0.42
ECHDC1-203ENST00000368291 NAT1P18440 290 aa17.67■□□□□ 0.42
ECHDC1-203ENST00000368291 LUMP51884 338 aaPredicted RBP17.67■□□□□ 0.42
ECHDC1-203ENST00000368291 ZNF329Q86UD4 541 aa17.67■□□□□ 0.42
ECHDC1-203ENST00000368291 PDPNQ86YL7 162 aa17.67■□□□□ 0.42
ECHDC1-203ENST00000368291 FOXRED2Q8IWF2 684 aa17.67■□□□□ 0.42
ECHDC1-203ENST00000368291 CHPT1Q8WUD6 406 aa17.67■□□□□ 0.42
ECHDC1-203ENST00000368291 RNF5Q99942 180 aa17.67■□□□□ 0.42
ECHDC1-203ENST00000368291 SMIM31A0A1B0GVY4 71 aa17.66■□□□□ 0.42
ECHDC1-203ENST00000368291 LINC00473A8K010 186 aa17.66■□□□□ 0.42
ECHDC1-203ENST00000368291 AP4M1O00189 453 aa17.66■□□□□ 0.42
ECHDC1-203ENST00000368291 RRHO14718 337 aa17.66■□□□□ 0.42
ECHDC1-203ENST00000368291 RBBP9O75884 186 aa17.66■□□□□ 0.42
ECHDC1-203ENST00000368291 HLA-DRB1P01911 266 aa17.66■□□□□ 0.42
ECHDC1-203ENST00000368291 CSF1P09603 554 aa17.66■□□□□ 0.42
ECHDC1-203ENST00000368291 DUTP33316 252 aaKnown RBP17.66■□□□□ 0.42
ECHDC1-203ENST00000368291 PRSS3P35030 304 aa17.66■□□□□ 0.42
ECHDC1-203ENST00000368291 NDUFA11Q86Y39 141 aa17.66■□□□□ 0.42
ECHDC1-203ENST00000368291 ZNF645Q8N7E2 425 aa17.66■□□□□ 0.42
ECHDC1-203ENST00000368291 OR5AP2Q8NGF4 316 aa17.66■□□□□ 0.42
ECHDC1-203ENST00000368291 DYNC2LI1Q8TCX1 351 aa17.66■□□□□ 0.42
ECHDC1-203ENST00000368291 GPX8Q8TED1 209 aa17.66■□□□□ 0.42
ECHDC1-203ENST00000368291 DDB2Q92466 427 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms