RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 RPL30P62888 115 aaKnown RBP11.98□□□□□ -0.49
CD48-201ENST00000368045 MZT1Q08AG7 82 aa11.98□□□□□ -0.49
CD48-201ENST00000368045 VWC2Q2TAL6 325 aa11.98□□□□□ -0.49
CD48-201ENST00000368045 WDR25Q64LD2 544 aaPredicted RBP11.98□□□□□ -0.49
CD48-201ENST00000368045 CYP2G1PQ6ZSU1 146 aa11.98□□□□□ -0.49
CD48-201ENST00000368045 RPP25LQ8N5L8 163 aaKnown RBP11.98□□□□□ -0.49
CD48-201ENST00000368045 OR10P1Q8NGE3 313 aa11.98□□□□□ -0.49
CD48-201ENST00000368045 DTD1Q8TEA8 209 aa11.98□□□□□ -0.49
CD48-201ENST00000368045 C5orf30Q96GV9 206 aa11.98□□□□□ -0.49
CD48-201ENST00000368045 COQ2Q96H96 371 aa11.98□□□□□ -0.49
CD48-201ENST00000368045 HSD17B10Q99714 261 aaKnown RBP11.98□□□□□ -0.49
CD48-201ENST00000368045 MANBALQ9NQG1 85 aa11.98□□□□□ -0.49
CD48-201ENST00000368045 MIOXQ9UGB7 285 aa11.98□□□□□ -0.49
CD48-201ENST00000368045 WASF3Q9UPY6 502 aa11.98□□□□□ -0.49
CD48-201ENST00000368045 LINC00587B1AMM8 73 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 M0R296 226 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 HIST1H2BKO60814 126 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 S1PR2O95136 353 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 HIST1H2BJP06899 126 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 HIST1H2BOP23527 126 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 HIST1H2BBP33778 126 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 CEBPDP49716 269 aaPredicted RBP11.97□□□□□ -0.49
CD48-201ENST00000368045 PSMB3P49720 205 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 HIST1H2BDP58876 126 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 HIST1H2BCP62807 126 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 NKX6-1P78426 367 aaPredicted RBP11.97□□□□□ -0.49
CD48-201ENST00000368045 MEF2BQ02080 365 aaPredicted RBP11.97□□□□□ -0.49
CD48-201ENST00000368045 HIST2H2BEQ16778 126 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 SMIM21Q3B7S5 101 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.97□□□□□ -0.49
CD48-201ENST00000368045 OR52L2PQ8NGH6 319 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 HIST1H2BHQ93079 126 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 HIST1H2BNQ99877 126 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 HIST1H2BMQ99879 126 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 GAR1Q9NY12 217 aaKnown RBP11.97□□□□□ -0.49
CD48-201ENST00000368045 TECTAO75443 2155 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 ZNF407Q9C0G0 2248 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 A0A1B0GWJ7 208 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 PMS2P5A8MQ11 134 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 WNT9BO14905 357 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 SOX15O60248 233 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 KBTBD11O94819 623 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 YIF1AO95070 293 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 HTD2P86397 168 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 AESQ08117 197 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 ZNF816Q0VGE8 651 aaPredicted RBP11.97□□□□□ -0.49
CD48-201ENST00000368045 DNLZQ5SXM8 178 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 ATP1A1-AS1Q5TC04 95 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 WDR82Q6UXN9 313 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 H2BFWTQ7Z2G1 175 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 ZNF808Q8N4W9 903 aaPredicted RBP11.97□□□□□ -0.49
CD48-201ENST00000368045 TRIB1Q96RU8 372 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 GGACTQ9BVM4 153 aa11.97□□□□□ -0.49
CD48-201ENST00000368045 ACTR3CQ9C0K3 210 aaPredicted RBP11.97□□□□□ -0.49
CD48-201ENST00000368045 FAM90A9PA6NNJ1 464 aa11.96□□□□□ -0.49
CD48-201ENST00000368045 C17orf98A8MV24 154 aa11.96□□□□□ -0.49
CD48-201ENST00000368045 PPP1R2P9O14990 202 aa11.96□□□□□ -0.49
CD48-201ENST00000368045 TIMM8AO60220 97 aaPredicted RBP11.96□□□□□ -0.49
CD48-201ENST00000368045 ADH4P08319 380 aa11.96□□□□□ -0.49
CD48-201ENST00000368045 FGF7P21781 194 aa11.96□□□□□ -0.49
CD48-201ENST00000368045 GABRA2P47869 451 aa11.96□□□□□ -0.49
CD48-201ENST00000368045 CD81P60033 236 aa11.96□□□□□ -0.49
CD48-201ENST00000368045 GNB2P62879 340 aa11.96□□□□□ -0.49
CD48-201ENST00000368045 TMEM241Q24JQ0 296 aa11.96□□□□□ -0.49
CD48-201ENST00000368045 GCNT2Q8N0V5 402 aa11.96□□□□□ -0.49
CD48-201ENST00000368045 ZNF709Q8N972 641 aa11.96□□□□□ -0.49
CD48-201ENST00000368045 SMIM7Q9BQ49 75 aa11.96□□□□□ -0.49
CD48-201ENST00000368045 IFITM10A6NMD0 228 aa11.95□□□□□ -0.5
CD48-201ENST00000368045 C17orf112F2Z3M2 114 aa11.95□□□□□ -0.5
CD48-201ENST00000368045 AQP7O14520 342 aa11.95□□□□□ -0.5
CD48-201ENST00000368045 SPINT2O43291 252 aa11.95□□□□□ -0.5
CD48-201ENST00000368045 IGKV1D-33P01593 117 aa11.95□□□□□ -0.5
CD48-201ENST00000368045 IGKV1-33P01594 117 aa11.95□□□□□ -0.5
CD48-201ENST00000368045 TRGC2P03986 189 aa11.95□□□□□ -0.5
CD48-201ENST00000368045 BRWD1-AS2P59051 145 aa11.95□□□□□ -0.5
CD48-201ENST00000368045 ZNF718Q3SXZ3 478 aa11.95□□□□□ -0.5
CD48-201ENST00000368045 AARDQ4LEZ3 155 aa11.95□□□□□ -0.5
CD48-201ENST00000368045 MBNL2Q5VZF2 373 aaKnown RBP11.95□□□□□ -0.5
CD48-201ENST00000368045 NCR3LG1Q68D85 454 aa11.95□□□□□ -0.5
CD48-201ENST00000368045 ACSM6Q6P461 480 aa11.95□□□□□ -0.5
CD48-201ENST00000368045 TMPRSS7Q7RTY8 843 aa11.95□□□□□ -0.5
CD48-201ENST00000368045 OR10G9Q8NGN4 311 aa11.95□□□□□ -0.5
CD48-201ENST00000368045 OR10G7Q8NGN6 311 aa11.95□□□□□ -0.5
CD48-201ENST00000368045 MRGPRDQ8TDS7 321 aa11.95□□□□□ -0.5
CD48-201ENST00000368045 CLN8Q9UBY8 286 aa11.95□□□□□ -0.5
CD48-201ENST00000368045 DMRT1Q9Y5R6 373 aa11.95□□□□□ -0.5
CD48-201ENST00000368045 ZDBF2Q9HCK1 2354 aa11.95□□□□□ -0.5
CD48-201ENST00000368045 DNAJC13O75165 2243 aa11.95□□□□□ -0.5
CD48-201ENST00000368045 CFAP54Q96N23 3096 aa11.95□□□□□ -0.5
CD48-201ENST00000368045 IGHV3-64DA0A0J9YX35 117 aa11.95□□□□□ -0.5
CD48-201ENST00000368045 ATXN7O15265 892 aaPredicted RBP11.95□□□□□ -0.5
CD48-201ENST00000368045 IGHV2-70P01814 119 aa11.95□□□□□ -0.5
CD48-201ENST00000368045 MDKP21741 143 aaPredicted RBP11.95□□□□□ -0.5
CD48-201ENST00000368045 KIR2DL2P43627 348 aaPredicted RBP11.95□□□□□ -0.5
CD48-201ENST00000368045 PMP22Q01453 160 aa11.95□□□□□ -0.5
CD48-201ENST00000368045 COL10A1Q03692 680 aa11.95□□□□□ -0.5
CD48-201ENST00000368045 OR2B11Q5JQS5 317 aa11.95□□□□□ -0.5
CD48-201ENST00000368045 FFAR4Q5NUL3 377 aa11.95□□□□□ -0.5
CD48-201ENST00000368045 ZNF826PQ6ZT77 177 aa11.95□□□□□ -0.5
CD48-201ENST00000368045 EDARADDQ8WWZ3 215 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms