RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 TRAV17A0A0B4J275 112 aa11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 TMEM210A6NLX4 147 aa11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 FUT5Q11128 374 aa11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 TTC9CQ8N5M4 171 aa11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 UCN2Q96RP3 112 aa11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 RNF7Q9UBF6 113 aa11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 ANKRD36CQ5JPF3 1778 aa11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 IGHV1OR21-1A0A087WYE8 117 aa11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 A0A0U1RQV5 110 aa11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 OR11H12B2RN74 326 aa11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 FAM90A26D6RGX4 464 aa11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 UPK3AO75631 287 aa11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 TNFRSF9Q07011 255 aa11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 TMEM78Q5T7P6 136 aa11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 OR11H1Q8NG94 326 aa11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 OR11H2Q8NH07 326 aa11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 RASL10BQ96S79 203 aa11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 IMMP2LQ96T52 175 aa11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 JKAMPQ9P055 326 aa11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 REG1BP48304 166 aa11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 MEF2CQ06413 473 aaPredicted RBP11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 RTP5Q14D33 572 aa11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 GPHA2Q96T91 129 aa11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 KLK15Q9H2R5 256 aa11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 GLRX2Q9NS18 164 aa11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 RABAC1Q9UI14 185 aa11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 ASAH2BP0C7U1 165 aa11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 FOXA3P55318 350 aaPredicted RBP11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 GCSAMLQ5JQS6 135 aa11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 GALNT14Q96FL9 552 aa11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 YBX2Q9Y2T7 364 aaKnown RBP11.59□□□□□ -0.55
CCDC144A-203ENST00000360495 WISP3O95389 354 aaPredicted RBP11.58□□□□□ -0.55
CCDC144A-203ENST00000360495 C8orf88P0DMB2 117 aa11.58□□□□□ -0.55
CCDC144A-203ENST00000360495 FGF12P61328 243 aa11.58□□□□□ -0.55
CCDC144A-203ENST00000360495 HBBP68871 147 aa11.58□□□□□ -0.55
CCDC144A-203ENST00000360495 TM4SF20Q53R12 229 aa11.58□□□□□ -0.55
CCDC144A-203ENST00000360495 ZNF645Q8N7E2 425 aa11.58□□□□□ -0.55
CCDC144A-203ENST00000360495 A0A087WWC5 75 aa11.58□□□□□ -0.56
CCDC144A-203ENST00000360495 RIPPLY3P57055 190 aa11.58□□□□□ -0.56
CCDC144A-203ENST00000360495 TMEM187Q14656 261 aa11.58□□□□□ -0.56
CCDC144A-203ENST00000360495 FBLN7Q53RD9 439 aa11.58□□□□□ -0.56
CCDC144A-203ENST00000360495 GFRALQ6UXV0 394 aa11.58□□□□□ -0.56
CCDC144A-203ENST00000360495 C1RLQ9NZP8 487 aa11.58□□□□□ -0.56
CCDC144A-203ENST00000360495 IGHV3OR15-7A0A075B7D8 119 aa11.58□□□□□ -0.56
CCDC144A-203ENST00000360495 MSGN1A6NI15 193 aa11.58□□□□□ -0.56
CCDC144A-203ENST00000360495 CLDN14O95500 239 aa11.58□□□□□ -0.56
CCDC144A-203ENST00000360495 CD160O95971 181 aa11.58□□□□□ -0.56
CCDC144A-203ENST00000360495 SRP19P09132 144 aaKnown RBP11.58□□□□□ -0.56
CCDC144A-203ENST00000360495 IL11RAQ14626 422 aa11.58□□□□□ -0.56
CCDC144A-203ENST00000360495 CENPWQ5EE01 88 aa11.58□□□□□ -0.56
CCDC144A-203ENST00000360495 FAM53AQ6NSI3 398 aaPredicted RBP11.58□□□□□ -0.56
CCDC144A-203ENST00000360495 LINC00470Q9BZP3 86 aa11.58□□□□□ -0.56
CCDC144A-203ENST00000360495 ZNF576Q9H609 170 aa11.58□□□□□ -0.56
CCDC144A-203ENST00000360495 H3BUT2 72 aa11.58□□□□□ -0.56
CCDC144A-203ENST00000360495 K7EQS6 105 aa11.58□□□□□ -0.56
CCDC144A-203ENST00000360495 HIST1H1AQ02539 215 aaPredicted RBP11.58□□□□□ -0.56
CCDC144A-203ENST00000360495 ROM1Q03395 351 aa11.58□□□□□ -0.56
CCDC144A-203ENST00000360495 GUSBP11Q6P575 273 aa11.58□□□□□ -0.56
CCDC144A-203ENST00000360495 UNQ9370/PRO34162Q6UXP9 181 aa11.58□□□□□ -0.56
CCDC144A-203ENST00000360495 ZNF441Q8N8Z8 693 aa11.58□□□□□ -0.56
CCDC144A-203ENST00000360495 NEUROG1Q92886 237 aa11.58□□□□□ -0.56
CCDC144A-203ENST00000360495 CHRNA10Q9GZZ6 450 aa11.58□□□□□ -0.56
CCDC144A-203ENST00000360495 ZNF430Q9H8G1 570 aaPredicted RBP11.58□□□□□ -0.56
CCDC144A-203ENST00000360495 TMEM160Q9NX00 188 aa11.58□□□□□ -0.56
CCDC144A-203ENST00000360495 TJP1Q07157 1748 aa11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 EVPLQ92817 2033 aa11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 SSC5DA1L4H1 1573 aa11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 MKRN2OSH3BPM6 223 aa11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 GDF9O60383 454 aa11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 ZG16O60844 167 aa11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 RPS20P60866 119 aaKnown RBP11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 SMAGPQ0VAQ4 97 aa11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 MBNL2Q5VZF2 373 aaKnown RBP11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 TPRX1Q8N7U7 411 aa11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 PSMG3Q9BT73 122 aaPredicted RBP11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 PRDM13Q9H4Q3 707 aa11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 PCM1Q15154 2024 aa11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 DDX60Q8IY21 1712 aaKnown RBP11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 DLL1O00548 723 aa11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 SPSB2Q99619 263 aa11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 TUBA4BQ9H853 241 aa11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 DTX4Q9Y2E6 619 aa11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 A0A1W2PPV9 198 aa11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 CISD3P0C7P0 127 aa11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 CIRBPQ14011 172 aaKnown RBP11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 MMDQ15546 238 aa11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 LDLRAD2Q5SZI1 272 aa11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 WFDC3Q8IUB2 231 aa11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 SGK494Q96LW2 274 aa11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 RPRMQ9NS64 109 aa11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 TYMSP04818 313 aa11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 CELA2BP08218 269 aaPredicted RBP11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 ANOS1P23352 680 aa11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 RCC1LQ96I51 464 aaKnown RBP11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 IL36BQ9NZH7 164 aa11.57□□□□□ -0.56
CCDC144A-203ENST00000360495 NPIPB6E9PJ23 425 aa11.56□□□□□ -0.56
CCDC144A-203ENST00000360495 UBE2CO00762 179 aa11.56□□□□□ -0.56
CCDC144A-203ENST00000360495 HOXC4P09017 264 aaPredicted RBP11.56□□□□□ -0.56
CCDC144A-203ENST00000360495 CYP2G1PQ6ZSU1 146 aa11.56□□□□□ -0.56
CCDC144A-203ENST00000360495 NUP37Q8NFH4 326 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms