RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 C1orf229Q6ZS94 237 aaPredicted RBP20.28■□□□□ 0.84
SHARPIN-201ENST00000359551 OR11H7Q8NGC8 314 aa20.28■□□□□ 0.84
SHARPIN-201ENST00000359551 COQ8AQ8NI60 647 aa20.28■□□□□ 0.84
SHARPIN-201ENST00000359551 HSD17B10Q99714 261 aaKnown RBP20.28■□□□□ 0.84
SHARPIN-201ENST00000359551 NEURL2Q9BR09 285 aa20.28■□□□□ 0.84
SHARPIN-201ENST00000359551 ZNRD1Q9P1U0 126 aa20.28■□□□□ 0.84
SHARPIN-201ENST00000359551 INSIG2Q9Y5U4 225 aa20.28■□□□□ 0.84
SHARPIN-201ENST00000359551 PDZD2O15018 2839 aa20.27■□□□□ 0.84
SHARPIN-201ENST00000359551 MMP9P14780 707 aa20.27■□□□□ 0.84
SHARPIN-201ENST00000359551 UCP1P25874 307 aa20.27■□□□□ 0.84
SHARPIN-201ENST00000359551 ZNF137PP52743 207 aa20.27■□□□□ 0.84
SHARPIN-201ENST00000359551 SP6Q3SY56 376 aa20.27■□□□□ 0.84
SHARPIN-201ENST00000359551 RPL39P5Q59GN2 51 aa20.27■□□□□ 0.84
SHARPIN-201ENST00000359551 LRTM2Q8N967 370 aa20.27■□□□□ 0.84
SHARPIN-201ENST00000359551 BEND2Q8NDZ0 799 aa20.27■□□□□ 0.84
SHARPIN-201ENST00000359551 MSI2Q96DH6 328 aaKnown RBP20.27■□□□□ 0.84
SHARPIN-201ENST00000359551 TMEM222Q9H0R3 208 aa20.27■□□□□ 0.84
SHARPIN-201ENST00000359551 HLA-GP17693 338 aa20.26■□□□□ 0.83
SHARPIN-201ENST00000359551 LIAT1Q6ZQX7 453 aa20.26■□□□□ 0.83
SHARPIN-201ENST00000359551 OR11H6Q8NGC7 330 aa20.26■□□□□ 0.83
SHARPIN-201ENST00000359551 OR13D1Q8NGV5 346 aa20.26■□□□□ 0.83
SHARPIN-201ENST00000359551 OR51H1Q8NH63 302 aa20.26■□□□□ 0.83
SHARPIN-201ENST00000359551 LPAR2Q9HBW0 351 aa20.26■□□□□ 0.83
SHARPIN-201ENST00000359551 SIRT7Q9NRC8 400 aa20.26■□□□□ 0.83
SHARPIN-201ENST00000359551 LIN7CQ9NUP9 197 aaKnown RBP20.26■□□□□ 0.83
SHARPIN-201ENST00000359551 PRR13Q9NZ81 148 aa20.26■□□□□ 0.83
SHARPIN-201ENST00000359551 TOR1AO14656 332 aa20.26■□□□□ 0.83
SHARPIN-201ENST00000359551 MSMBP08118 114 aa20.26■□□□□ 0.83
SHARPIN-201ENST00000359551 CXCL3P19876 107 aa20.26■□□□□ 0.83
SHARPIN-201ENST00000359551 DUTP33316 252 aaKnown RBP20.26■□□□□ 0.83
SHARPIN-201ENST00000359551 RPL30P62888 115 aaKnown RBP20.26■□□□□ 0.83
SHARPIN-201ENST00000359551 PAX8Q06710 450 aa20.26■□□□□ 0.83
SHARPIN-201ENST00000359551 CATR1Q13166 79 aa20.26■□□□□ 0.83
SHARPIN-201ENST00000359551 HCP5Q6MZN7 132 aa20.26■□□□□ 0.83
SHARPIN-201ENST00000359551 LIN54Q6MZP7 749 aa20.26■□□□□ 0.83
SHARPIN-201ENST00000359551 FAM71F2Q6NXP2 309 aa20.26■□□□□ 0.83
SHARPIN-201ENST00000359551 ZNF833PQ6ZTB9 187 aa20.26■□□□□ 0.83
SHARPIN-201ENST00000359551 VMO1Q7Z5L0 202 aa20.26■□□□□ 0.83
SHARPIN-201ENST00000359551 Q96MF0 132 aa20.26■□□□□ 0.83
SHARPIN-201ENST00000359551 FOXC2Q99958 501 aa20.26■□□□□ 0.83
SHARPIN-201ENST00000359551 REG4Q9BYZ8 158 aa20.26■□□□□ 0.83
SHARPIN-201ENST00000359551 FLNBO75369 2602 aaKnown RBP20.25■□□□□ 0.83
SHARPIN-201ENST00000359551 B4DSR2 109 aa20.25■□□□□ 0.83
SHARPIN-201ENST00000359551 PRRX1P54821 245 aa20.25■□□□□ 0.83
SHARPIN-201ENST00000359551 C2orf68Q2NKX9 166 aa20.25■□□□□ 0.83
SHARPIN-201ENST00000359551 HLA-DRB5Q30154 266 aa20.25■□□□□ 0.83
SHARPIN-201ENST00000359551 TCTEX1D1Q8N7M0 179 aa20.25■□□□□ 0.83
SHARPIN-201ENST00000359551 UXS1Q8NBZ7 420 aa20.25■□□□□ 0.83
SHARPIN-201ENST00000359551 OR10X1Q8NGY0 326 aa20.25■□□□□ 0.83
SHARPIN-201ENST00000359551 ST6GALNAC6Q969X2 333 aa20.25■□□□□ 0.83
SHARPIN-201ENST00000359551 TMEM56Q96MV1 263 aa20.25■□□□□ 0.83
SHARPIN-201ENST00000359551 HEXA-AS1Q9H8Q6 139 aa20.25■□□□□ 0.83
SHARPIN-201ENST00000359551 FAM212BQ9NTI7 297 aaPredicted RBP20.25■□□□□ 0.83
SHARPIN-201ENST00000359551 TMEM56-RWDD3S4R434 201 aa20.25■□□□□ 0.83
SHARPIN-201ENST00000359551 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.25■□□□□ 0.834e-10■■■■□ 26.2
SHARPIN-201ENST00000359551 LINC00473A8K010 186 aa20.24■□□□□ 0.83
SHARPIN-201ENST00000359551 M0R1X1 148 aa20.24■□□□□ 0.83
SHARPIN-201ENST00000359551 PFDN1O60925 122 aa20.24■□□□□ 0.83
SHARPIN-201ENST00000359551 SRPXP78539 464 aa20.24■□□□□ 0.83
SHARPIN-201ENST00000359551 TMEM186Q96B77 213 aa20.24■□□□□ 0.83
SHARPIN-201ENST00000359551 S1PR3Q99500 378 aa20.24■□□□□ 0.83
SHARPIN-201ENST00000359551 MGAT4CQ9UBM8 478 aa20.24■□□□□ 0.83
SHARPIN-201ENST00000359551 ITPR2Q14571 2701 aa20.24■□□□□ 0.83
SHARPIN-201ENST00000359551 VPS13CQ709C8 3753 aa20.23■□□□□ 0.83
SHARPIN-201ENST00000359551 RNF223E7ERA6 249 aa20.23■□□□□ 0.83
SHARPIN-201ENST00000359551 CDS2O95674 445 aa20.23■□□□□ 0.83
SHARPIN-201ENST00000359551 COX7A1P24310 79 aa20.23■□□□□ 0.83
SHARPIN-201ENST00000359551 PRB3Q04118 309 aaPredicted RBP20.23■□□□□ 0.83
SHARPIN-201ENST00000359551 AKAP14Q86UN6 197 aa20.23■□□□□ 0.83
SHARPIN-201ENST00000359551 LGI3Q8N145 548 aa20.23■□□□□ 0.83
SHARPIN-201ENST00000359551 PNKDQ8N490 385 aa20.23■□□□□ 0.83
SHARPIN-201ENST00000359551 LHFPL5Q8TAF8 219 aa20.23■□□□□ 0.83
SHARPIN-201ENST00000359551 TBX15Q96SF7 602 aa20.23■□□□□ 0.83
SHARPIN-201ENST00000359551 TOX4O94842 621 aa20.22■□□□□ 0.83
SHARPIN-201ENST00000359551 OR4P4Q8NGL7 312 aa20.22■□□□□ 0.83
SHARPIN-201ENST00000359551 DDB2Q92466 427 aa20.22■□□□□ 0.83
SHARPIN-201ENST00000359551 RAB18Q9NP72 206 aa20.22■□□□□ 0.83
SHARPIN-201ENST00000359551 ODF3BA8MYP8 253 aa20.22■□□□□ 0.83
SHARPIN-201ENST00000359551 CCNKO75909 580 aa20.22■□□□□ 0.83
SHARPIN-201ENST00000359551 IL3RAP26951 378 aa20.22■□□□□ 0.83
SHARPIN-201ENST00000359551 BRWD1-AS2P59051 145 aa20.22■□□□□ 0.83
SHARPIN-201ENST00000359551 ZNF585BQ52M93 769 aa20.22■□□□□ 0.83
SHARPIN-201ENST00000359551 NCR3LG1Q68D85 454 aa20.22■□□□□ 0.83
SHARPIN-201ENST00000359551 TCTEX1D2Q8WW35 142 aa20.22■□□□□ 0.83
SHARPIN-201ENST00000359551 IL22RA2Q969J5 263 aa20.22■□□□□ 0.83
SHARPIN-201ENST00000359551 ADTRPQ96IZ2 230 aa20.22■□□□□ 0.83
SHARPIN-201ENST00000359551 ST6GAL2Q96JF0 529 aa20.22■□□□□ 0.83
SHARPIN-201ENST00000359551 C18orf12Q96KH6 178 aa20.22■□□□□ 0.83
SHARPIN-201ENST00000359551 RNASEK-C17orf49H0YIS7 233 aa20.21■□□□□ 0.83
SHARPIN-201ENST00000359551 GOSR2O14653 212 aa20.21■□□□□ 0.83
SHARPIN-201ENST00000359551 ZNF16P17020 682 aaPredicted RBP20.21■□□□□ 0.83
SHARPIN-201ENST00000359551 HOXB4P17483 251 aaPredicted RBP20.21■□□□□ 0.83
SHARPIN-201ENST00000359551 THBS3P49746 956 aa20.21■□□□□ 0.83
SHARPIN-201ENST00000359551 LINC00205P59089 165 aa20.21■□□□□ 0.83
SHARPIN-201ENST00000359551 LINC01356Q8N9X3 169 aa20.21■□□□□ 0.83
SHARPIN-201ENST00000359551 OR5M8Q8NGP6 311 aa20.21■□□□□ 0.83
SHARPIN-201ENST00000359551 TRAV20A0A0B4J274 112 aa20.2■□□□□ 0.82
SHARPIN-201ENST00000359551 BUB1B-PAK6H3BSN5 160 aa20.2■□□□□ 0.82
SHARPIN-201ENST00000359551 KLRD1Q13241 179 aa20.2■□□□□ 0.82
SHARPIN-201ENST00000359551 DRAXINQ8NBI3 349 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms