RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 PDLIM3Q53GG5 364 aaPredicted RBP14.18□□□□□ -0.14
VPS13B-201ENST00000355155 GNG12Q9UBI6 72 aa14.18□□□□□ -0.14
VPS13B-201ENST00000355155 TMPRSS2O15393 492 aa14.18□□□□□ -0.14
VPS13B-201ENST00000355155 ST8SIA5O15466 376 aa14.18□□□□□ -0.14
VPS13B-201ENST00000355155 NDUFB3O43676 98 aa14.18□□□□□ -0.14
VPS13B-201ENST00000355155 GPR12P47775 334 aa14.18□□□□□ -0.14
VPS13B-201ENST00000355155 RAB14P61106 215 aa14.18□□□□□ -0.14
VPS13B-201ENST00000355155 TMEM155Q4W5P6 130 aa14.18□□□□□ -0.14
VPS13B-201ENST00000355155 CT45A1Q5HYN5 189 aa14.18□□□□□ -0.14
VPS13B-201ENST00000355155 BAP18Q8IXM2 172 aa14.18□□□□□ -0.14
VPS13B-201ENST00000355155 STPG2Q8N412 459 aa14.18□□□□□ -0.14
VPS13B-201ENST00000355155 UBAC2Q8NBM4 344 aa14.18□□□□□ -0.14
VPS13B-201ENST00000355155 CT45A3Q8NHU0 189 aa14.18□□□□□ -0.14
VPS13B-201ENST00000355155 CCL17Q92583 94 aa14.18□□□□□ -0.14
VPS13B-201ENST00000355155 ADTRPQ96IZ2 230 aa14.18□□□□□ -0.14
VPS13B-201ENST00000355155 RAB1BQ9H0U4 201 aa14.18□□□□□ -0.14
VPS13B-201ENST00000355155 IGHV3-43A0A0B4J1X8 118 aa14.17□□□□□ -0.14
VPS13B-201ENST00000355155 F5H0A9 414 aaPredicted RBP14.17□□□□□ -0.14
VPS13B-201ENST00000355155 RBP4P02753 201 aa14.17□□□□□ -0.14
VPS13B-201ENST00000355155 IGHV3-43DP0DP04 118 aa14.17□□□□□ -0.14
VPS13B-201ENST00000355155 RRASP10301 218 aa14.17□□□□□ -0.14
VPS13B-201ENST00000355155 PVALBP20472 110 aaPredicted RBP14.17□□□□□ -0.14
VPS13B-201ENST00000355155 PAX9P55771 341 aa14.17□□□□□ -0.14
VPS13B-201ENST00000355155 BAXQ07812 192 aa14.17□□□□□ -0.14
VPS13B-201ENST00000355155 Q6ZRM9 215 aa14.17□□□□□ -0.14
VPS13B-201ENST00000355155 FGFRL1Q8N441 504 aa14.17□□□□□ -0.14
VPS13B-201ENST00000355155 RAB40CQ96S21 281 aa14.17□□□□□ -0.14
VPS13B-201ENST00000355155 ZNF471Q9BX82 626 aaPredicted RBP14.17□□□□□ -0.14
VPS13B-201ENST00000355155 LINC00473A8K010 186 aa14.17□□□□□ -0.14
VPS13B-201ENST00000355155 LYPD2Q6UXB3 125 aa14.17□□□□□ -0.14
VPS13B-201ENST00000355155 ZNF841Q6ZN19 808 aa14.17□□□□□ -0.14
VPS13B-201ENST00000355155 ZNF295-AS1Q8N0V1 137 aa14.17□□□□□ -0.14
VPS13B-201ENST00000355155 C19orf12Q9NSK7 152 aa14.17□□□□□ -0.14
VPS13B-201ENST00000355155 RNF150Q9ULK6 438 aa14.17□□□□□ -0.14
VPS13B-201ENST00000355155 KIAA2026Q5HYC2 2103 aa14.17□□□□□ -0.14
VPS13B-201ENST00000355155 C17orf98A8MV24 154 aa14.16□□□□□ -0.14
VPS13B-201ENST00000355155 LEUTXA8MZ59 168 aa14.16□□□□□ -0.14
VPS13B-201ENST00000355155 TOR1AO14656 332 aa14.16□□□□□ -0.14
VPS13B-201ENST00000355155 JTBO76095 146 aa14.16□□□□□ -0.14
VPS13B-201ENST00000355155 TMEM200BQ69YZ2 307 aa14.16□□□□□ -0.14
VPS13B-201ENST00000355155 PLCE1Q9P212 2302 aa14.16□□□□□ -0.14
VPS13B-201ENST00000355155 SPDEFO95238 335 aa14.16□□□□□ -0.14
VPS13B-201ENST00000355155 ZNF137PP52743 207 aa14.16□□□□□ -0.14
VPS13B-201ENST00000355155 POU2AF1Q16633 256 aa14.16□□□□□ -0.14
VPS13B-201ENST00000355155 CXorf66Q5JRM2 361 aaPredicted RBP14.16□□□□□ -0.14
VPS13B-201ENST00000355155 EIF4E3Q8N5X7 224 aaKnown RBP14.16□□□□□ -0.14
VPS13B-201ENST00000355155 OR2C3Q8N628 320 aa14.16□□□□□ -0.14
VPS13B-201ENST00000355155 SLC25A31Q9H0C2 315 aa14.16□□□□□ -0.14
VPS13B-201ENST00000355155 WSB1Q9Y6I7 421 aa14.16□□□□□ -0.14
VPS13B-201ENST00000355155 KCNAB3O43448 404 aa14.15□□□□□ -0.14
VPS13B-201ENST00000355155 HPRT1P00492 218 aa14.15□□□□□ -0.14
VPS13B-201ENST00000355155 THBS3P49746 956 aa14.15□□□□□ -0.14
VPS13B-201ENST00000355155 ZNF273Q14593 569 aa14.15□□□□□ -0.14
VPS13B-201ENST00000355155 ALKAL2Q6UX46 152 aa14.15□□□□□ -0.14
VPS13B-201ENST00000355155 SMIM8Q96KF7 97 aa14.15□□□□□ -0.14
VPS13B-201ENST00000355155 ZNF714Q96N38 554 aa14.15□□□□□ -0.14
VPS13B-201ENST00000355155 BARX1Q9HBU1 254 aaPredicted RBP14.15□□□□□ -0.14
VPS13B-201ENST00000355155 HSPB7Q9UBY9 170 aa14.15□□□□□ -0.14
VPS13B-201ENST00000355155 CACFD1Q9UGQ2 172 aa14.15□□□□□ -0.14
VPS13B-201ENST00000355155 PIEZO1Q92508 2521 aa14.15□□□□□ -0.14
VPS13B-201ENST00000355155 CACNA1DQ01668 2161 aa14.15□□□□□ -0.14
VPS13B-201ENST00000355155 DVL1O14640 695 aa14.15□□□□□ -0.14
VPS13B-201ENST00000355155 LY86O95711 162 aa14.15□□□□□ -0.14
VPS13B-201ENST00000355155 SCGB1D2O95969 90 aa14.15□□□□□ -0.14
VPS13B-201ENST00000355155 COL8A2P25067 703 aa14.15□□□□□ -0.14
VPS13B-201ENST00000355155 TMEM33P57088 247 aa14.15□□□□□ -0.14
VPS13B-201ENST00000355155 RPL31P62899 125 aaKnown RBP14.15□□□□□ -0.14
VPS13B-201ENST00000355155 SPAG16Q8N0X2 631 aa14.15□□□□□ -0.14
VPS13B-201ENST00000355155 TCTEX1D2Q8WW35 142 aa14.15□□□□□ -0.14
VPS13B-201ENST00000355155 RAB39BQ96DA2 213 aa14.15□□□□□ -0.14
VPS13B-201ENST00000355155 FBXL17Q9UF56 701 aa14.15□□□□□ -0.14
VPS13B-201ENST00000355155 SLC31A2O15432 143 aa14.14□□□□□ -0.15
VPS13B-201ENST00000355155 RAMP3O60896 148 aa14.14□□□□□ -0.15
VPS13B-201ENST00000355155 POLR2GP62487 172 aaKnown RBP eCLIP14.14□□□□□ -0.15
VPS13B-201ENST00000355155 ZNF833PQ6ZTB9 187 aa14.14□□□□□ -0.15
VPS13B-201ENST00000355155 GINS3Q9BRX5 216 aa14.14□□□□□ -0.15
VPS13B-201ENST00000355155 EWSR1Q01844 656 aaKnown RBP eCLIP14.14□□□□□ -0.15
VPS13B-201ENST00000355155 REG4Q9BYZ8 158 aa14.14□□□□□ -0.15
VPS13B-201ENST00000355155 CACNG5Q9UF02 275 aa14.14□□□□□ -0.15
VPS13B-201ENST00000355155 TAGLNQ01995 201 aaKnown RBP14.14□□□□□ -0.15
VPS13B-201ENST00000355155 NCR3LG1Q68D85 454 aa14.14□□□□□ -0.15
VPS13B-201ENST00000355155 IGFBPL1Q8WX77 278 aa14.14□□□□□ -0.15
VPS13B-201ENST00000355155 A6NNC1 897 aa14.13□□□□□ -0.15
VPS13B-201ENST00000355155 MMP23AO75900 390 aa14.13□□□□□ -0.15
VPS13B-201ENST00000355155 S1PR2O95136 353 aa14.13□□□□□ -0.15
VPS13B-201ENST00000355155 TMEM50AO95807 157 aa14.13□□□□□ -0.15
VPS13B-201ENST00000355155 IL6RP08887 468 aaPredicted RBP14.13□□□□□ -0.15
VPS13B-201ENST00000355155 NDUFB7P17568 137 aa14.13□□□□□ -0.15
VPS13B-201ENST00000355155 TMEM252Q8N6L7 170 aa14.13□□□□□ -0.15
VPS13B-201ENST00000355155 LY6G5BQ8NDX9 201 aa14.13□□□□□ -0.15
VPS13B-201ENST00000355155 TXNL1O43396 289 aa14.13□□□□□ -0.15
VPS13B-201ENST00000355155 FAM157CP0CG43 387 aa14.13□□□□□ -0.15
VPS13B-201ENST00000355155 C1orf229Q6ZS94 237 aaPredicted RBP14.13□□□□□ -0.15
VPS13B-201ENST00000355155 PDZD9Q8IXQ8 264 aa14.13□□□□□ -0.15
VPS13B-201ENST00000355155 C11orf42Q8N5U0 333 aa14.13□□□□□ -0.15
VPS13B-201ENST00000355155 OR52E5Q8NH55 327 aa14.13□□□□□ -0.15
VPS13B-201ENST00000355155 MIOXQ9UGB7 285 aa14.13□□□□□ -0.15
VPS13B-201ENST00000355155 ITPR1Q14643 2758 aa14.12□□□□□ -0.15
VPS13B-201ENST00000355155 IGSF23A1L1A6 192 aa14.12□□□□□ -0.15
VPS13B-201ENST00000355155 SOD3P08294 240 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms