RNA–Protein interactions for RNA: ENST00000351205.8

SMN1-201, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-201ENST00000351205 SPNP16150 400 aa13.01□□□□□ -0.33
SMN1-201ENST00000351205 CEACAM6P40199 344 aa13.01□□□□□ -0.33
SMN1-201ENST00000351205 TMEM267Q0VDI3 215 aaPredicted RBP13.01□□□□□ -0.33
SMN1-201ENST00000351205 P2RY14Q15391 338 aa13.01□□□□□ -0.33
SMN1-201ENST00000351205 MED22Q15528 200 aa13.01□□□□□ -0.33
SMN1-201ENST00000351205 ACTBL2Q562R1 376 aa13.01□□□□□ -0.33
SMN1-201ENST00000351205 LIPKQ5VXJ0 399 aa13.01□□□□□ -0.33
SMN1-201ENST00000351205 PYHIN1Q6K0P9 492 aa13.01□□□□□ -0.33
SMN1-201ENST00000351205 CD200R1LQ6Q8B3 271 aa13.01□□□□□ -0.33
SMN1-201ENST00000351205 PPP1R27Q86WC6 154 aa13.01□□□□□ -0.33
SMN1-201ENST00000351205 DRAXINQ8NBI3 349 aaPredicted RBP13.01□□□□□ -0.33
SMN1-201ENST00000351205 EDARADDQ8WWZ3 215 aa13.01□□□□□ -0.33
SMN1-201ENST00000351205 ARPC1AQ92747 370 aa13.01□□□□□ -0.33
SMN1-201ENST00000351205 CLCC1Q96S66 551 aa13.01□□□□□ -0.33
SMN1-201ENST00000351205 GFI1Q99684 422 aa13.01□□□□□ -0.33
SMN1-201ENST00000351205 GHITMQ9H3K2 345 aa13.01□□□□□ -0.33
SMN1-201ENST00000351205 METTL1Q9UBP6 276 aaKnown RBP13.01□□□□□ -0.33
SMN1-201ENST00000351205 SACSQ9NZJ4 4579 aa13.01□□□□□ -0.33
SMN1-201ENST00000351205 C3orf84H3BNL1 204 aa13□□□□□ -0.33
SMN1-201ENST00000351205 HSPA12AO43301 675 aa13□□□□□ -0.33
SMN1-201ENST00000351205 PROP1O75360 226 aa13□□□□□ -0.33
SMN1-201ENST00000351205 IGHV3-11P01762 117 aa13□□□□□ -0.33
SMN1-201ENST00000351205 ARSBP15848 533 aa13□□□□□ -0.33
SMN1-201ENST00000351205 ZBTB25P24278 435 aa13□□□□□ -0.33
SMN1-201ENST00000351205 PSG5Q15238 335 aa13□□□□□ -0.33
SMN1-201ENST00000351205 AKIRIN2Q53H80 203 aa13□□□□□ -0.33
SMN1-201ENST00000351205 ACSM6Q6P461 480 aa13□□□□□ -0.33
SMN1-201ENST00000351205 UNQ5815/PRO19632Q6UWF5 114 aa13□□□□□ -0.33
SMN1-201ENST00000351205 SBSPONQ8IVN8 264 aa13□□□□□ -0.33
SMN1-201ENST00000351205 FAM89BQ8N5H3 189 aa13□□□□□ -0.33
SMN1-201ENST00000351205 TMEM203Q969S6 136 aa13□□□□□ -0.33
SMN1-201ENST00000351205 MS4A10Q96PG2 267 aa13□□□□□ -0.33
SMN1-201ENST00000351205 RNF5Q99942 180 aa13□□□□□ -0.33
SMN1-201ENST00000351205 URM1Q9BTM9 101 aaKnown RBP13□□□□□ -0.33
SMN1-201ENST00000351205 RNF150Q9ULK6 438 aa13□□□□□ -0.33
SMN1-201ENST00000351205 FOXI3A8MTJ6 420 aaPredicted RBP12.99□□□□□ -0.33
SMN1-201ENST00000351205 SLC17A2O00624 439 aa12.99□□□□□ -0.33
SMN1-201ENST00000351205 CA2P00918 260 aa12.99□□□□□ -0.33
SMN1-201ENST00000351205 IGKV1-16P04430 117 aa12.99□□□□□ -0.33
SMN1-201ENST00000351205 SCTP09683 121 aa12.99□□□□□ -0.33
SMN1-201ENST00000351205 GP9P14770 177 aa12.99□□□□□ -0.33
SMN1-201ENST00000351205 CPEP16870 476 aa12.99□□□□□ -0.33
SMN1-201ENST00000351205 LINC00205P59089 165 aa12.99□□□□□ -0.33
SMN1-201ENST00000351205 ZNF562Q6V9R5 426 aa12.99□□□□□ -0.33
SMN1-201ENST00000351205 TMEM91Q6ZNR0 172 aa12.99□□□□□ -0.33
SMN1-201ENST00000351205 OVCH2Q7RTZ1 564 aa12.99□□□□□ -0.33
SMN1-201ENST00000351205 LFNGQ8NES3 379 aa12.99□□□□□ -0.33
SMN1-201ENST00000351205 OR6Q1Q8NGQ2 317 aa12.99□□□□□ -0.33
SMN1-201ENST00000351205 UFD1Q92890 307 aa12.99□□□□□ -0.33
SMN1-201ENST00000351205 PTX4Q96A99 478 aa12.99□□□□□ -0.33
SMN1-201ENST00000351205 VCXQ9H320 206 aa12.99□□□□□ -0.33
SMN1-201ENST00000351205 PLGRKTQ9HBL7 147 aa12.99□□□□□ -0.33
SMN1-201ENST00000351205 Q9N2K0 584 aa12.99□□□□□ -0.33
SMN1-201ENST00000351205 C12orf4Q9NQ89 552 aa12.99□□□□□ -0.33
SMN1-201ENST00000351205 HSF4Q9ULV5 492 aa12.99□□□□□ -0.33
SMN1-201ENST00000351205 MGAT4AQ9UM21 535 aa12.99□□□□□ -0.33
SMN1-201ENST00000351205 HSPB1P04792 205 aaKnown RBP12.98□□□□□ -0.33
SMN1-201ENST00000351205 OR8U9P0C7N5 309 aa12.98□□□□□ -0.33
SMN1-201ENST00000351205 FRMD6-AS1P0C7T7 363 aa12.98□□□□□ -0.33
SMN1-201ENST00000351205 TMEM50BP56557 158 aa12.98□□□□□ -0.33
SMN1-201ENST00000351205 TPPP2P59282 170 aa12.98□□□□□ -0.33
SMN1-201ENST00000351205 IRF3Q14653 427 aa12.98□□□□□ -0.33
SMN1-201ENST00000351205 ZNF383Q8NA42 475 aa12.98□□□□□ -0.33
SMN1-201ENST00000351205 ARHGAP5-AS1Q96IT6 56 aa12.98□□□□□ -0.33
SMN1-201ENST00000351205 RCHY1Q96PM5 261 aa12.98□□□□□ -0.33
SMN1-201ENST00000351205 SLA2Q9H6Q3 261 aa12.98□□□□□ -0.33
SMN1-201ENST00000351205 SCN3BQ9NY72 215 aa12.98□□□□□ -0.33
SMN1-201ENST00000351205 AK6Q9Y3D8 172 aaKnown RBP12.98□□□□□ -0.33
SMN1-201ENST00000351205 IGKV1-6A0A0C4DH72 117 aa12.97□□□□□ -0.33
SMN1-201ENST00000351205 TRIM64CA6NLI5 447 aa12.97□□□□□ -0.33
SMN1-201ENST00000351205 SPDEFO95238 335 aa12.97□□□□□ -0.33
SMN1-201ENST00000351205 TFAP2AP05549 437 aa12.97□□□□□ -0.33
SMN1-201ENST00000351205 VEGFCP49767 419 aa12.97□□□□□ -0.33
SMN1-201ENST00000351205 CLDN12P56749 244 aa12.97□□□□□ -0.33
SMN1-201ENST00000351205 RPS16P62249 146 aaKnown RBP12.97□□□□□ -0.33
SMN1-201ENST00000351205 RPS25P62851 125 aaKnown RBP12.97□□□□□ -0.33
SMN1-201ENST00000351205 PITPNAQ00169 270 aa12.97□□□□□ -0.33
SMN1-201ENST00000351205 RAB11BQ15907 218 aa12.97□□□□□ -0.33
SMN1-201ENST00000351205 FLYWCH2Q96CP2 140 aaKnown RBP12.97□□□□□ -0.33
SMN1-201ENST00000351205 RHOVQ96L33 236 aa12.97□□□□□ -0.33
SMN1-201ENST00000351205 TSNAXQ99598 290 aaKnown RBP12.97□□□□□ -0.33
SMN1-201ENST00000351205 CMSS1Q9BQ75 279 aaKnown RBP12.97□□□□□ -0.33
SMN1-201ENST00000351205 PECRQ9BY49 303 aa12.97□□□□□ -0.33
SMN1-201ENST00000351205 ZNF221Q9UK13 617 aa12.97□□□□□ -0.33
SMN1-201ENST00000351205 TRGV3P03979 118 aa12.96□□□□□ -0.33
SMN1-201ENST00000351205 HSMCR30P0CW71 290 aa12.96□□□□□ -0.33
SMN1-201ENST00000351205 CD40LGP29965 261 aa12.96□□□□□ -0.33
SMN1-201ENST00000351205 PLAC9Q5JTB6 97 aa12.96□□□□□ -0.33
SMN1-201ENST00000351205 HAPLN4Q86UW8 402 aa12.96□□□□□ -0.33
SMN1-201ENST00000351205 PDPNQ86YL7 162 aa12.96□□□□□ -0.33
SMN1-201ENST00000351205 GRPEL2Q8TAA5 225 aa12.96□□□□□ -0.33
SMN1-201ENST00000351205 MUC7Q8TAX7 377 aa12.96□□□□□ -0.33
SMN1-201ENST00000351205 OR4C12Q96R67 309 aa12.96□□□□□ -0.33
SMN1-201ENST00000351205 RDH8Q9NYR8 311 aa12.96□□□□□ -0.33
SMN1-201ENST00000351205 RYR2Q92736 4967 aa12.96□□□□□ -0.34
SMN1-201ENST00000351205 ARPC1BO15143 372 aaKnown RBP12.95□□□□□ -0.34
SMN1-201ENST00000351205 SLC25A17O43808 307 aa12.95□□□□□ -0.34
SMN1-201ENST00000351205 ARL6IP5O75915 188 aa12.95□□□□□ -0.34
SMN1-201ENST00000351205 APOA2P02652 100 aa12.95□□□□□ -0.34
SMN1-201ENST00000351205 SSBP2P81877 361 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms