RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 ANKRD39Q53RE8 183 aa8.54□□□□□ -1.04
TRAPPC6B-202ENST00000347691 NUFIP2Q7Z417 695 aaKnown RBP8.54□□□□□ -1.04
TRAPPC6B-202ENST00000347691 WDR31Q8NA23 367 aa8.54□□□□□ -1.04
TRAPPC6B-202ENST00000347691 SVIPQ8NHG7 77 aa8.54□□□□□ -1.04
TRAPPC6B-202ENST00000347691 DTD1Q8TEA8 209 aa8.54□□□□□ -1.04
TRAPPC6B-202ENST00000347691 TAAR6Q96RI8 345 aa8.54□□□□□ -1.04
TRAPPC6B-202ENST00000347691 NEU1Q99519 415 aa8.54□□□□□ -1.04
TRAPPC6B-202ENST00000347691 FAM173AQ9BQD7 235 aa8.54□□□□□ -1.04
TRAPPC6B-202ENST00000347691 NPCDR1Q9BY65 106 aa8.54□□□□□ -1.04
TRAPPC6B-202ENST00000347691 NCKAP5O14513 1909 aa8.54□□□□□ -1.04
TRAPPC6B-202ENST00000347691 TRAV9-1A0A075B6T8 112 aa8.54□□□□□ -1.04
TRAPPC6B-202ENST00000347691 K7ESF4 209 aa8.54□□□□□ -1.04
TRAPPC6B-202ENST00000347691 M0R143 59 aa8.54□□□□□ -1.04
TRAPPC6B-202ENST00000347691 MLNRO43193 412 aa8.54□□□□□ -1.04
TRAPPC6B-202ENST00000347691 PAGE4O60829 102 aa8.54□□□□□ -1.04
TRAPPC6B-202ENST00000347691 OR2H2O95918 312 aa8.54□□□□□ -1.04
TRAPPC6B-202ENST00000347691 OR10J1P30954 320 aa8.54□□□□□ -1.04
TRAPPC6B-202ENST00000347691 RPP30P78346 268 aaKnown RBP8.54□□□□□ -1.04
TRAPPC6B-202ENST00000347691 PRR18Q8N4B5 295 aa8.54□□□□□ -1.04
TRAPPC6B-202ENST00000347691 FKBP11Q9NYL4 201 aa8.54□□□□□ -1.04
TRAPPC6B-202ENST00000347691 TRAPPC1Q9Y5R8 145 aa8.54□□□□□ -1.04
TRAPPC6B-202ENST00000347691 CEP290O15078 2479 aa8.53□□□□□ -1.04
TRAPPC6B-202ENST00000347691 SIRPB1O00241 398 aa8.53□□□□□ -1.04
TRAPPC6B-202ENST00000347691 NTN3O00634 580 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC6B-202ENST00000347691 MPDU1O75352 247 aa8.53□□□□□ -1.04
TRAPPC6B-202ENST00000347691 CLDN14O95500 239 aa8.53□□□□□ -1.04
TRAPPC6B-202ENST00000347691 NGFP01138 241 aa8.53□□□□□ -1.04
TRAPPC6B-202ENST00000347691 P0C879 139 aa8.53□□□□□ -1.04
TRAPPC6B-202ENST00000347691 OTX2P32243 289 aa8.53□□□□□ -1.04
TRAPPC6B-202ENST00000347691 GNB2P62879 340 aa8.53□□□□□ -1.04
TRAPPC6B-202ENST00000347691 IGFBP7Q16270 282 aa8.53□□□□□ -1.04
TRAPPC6B-202ENST00000347691 C9orf135Q5VTT2 229 aa8.53□□□□□ -1.04
TRAPPC6B-202ENST00000347691 PPP1R32Q7Z5V6 425 aa8.53□□□□□ -1.04
TRAPPC6B-202ENST00000347691 TGIF2LXQ8IUE1 241 aa8.53□□□□□ -1.04
TRAPPC6B-202ENST00000347691 NINJ1Q92982 152 aa8.53□□□□□ -1.04
TRAPPC6B-202ENST00000347691 GMPPAQ96IJ6 420 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC6B-202ENST00000347691 ELOVL1Q9BW60 279 aa8.53□□□□□ -1.04
TRAPPC6B-202ENST00000347691 TMEM30CPA0ZSE6 113 aa8.53□□□□□ -1.04
TRAPPC6B-202ENST00000347691 RAB4AP20338 218 aa8.53□□□□□ -1.04
TRAPPC6B-202ENST00000347691 ZNF146Q15072 292 aa8.53□□□□□ -1.04
TRAPPC6B-202ENST00000347691 C1orf194Q5T5A4 169 aa8.53□□□□□ -1.04
TRAPPC6B-202ENST00000347691 SLC23A3Q6PIS1 610 aa8.53□□□□□ -1.04
TRAPPC6B-202ENST00000347691 BTNL3Q6UXE8 466 aa8.53□□□□□ -1.04
TRAPPC6B-202ENST00000347691 MCEMP1Q8IX19 187 aa8.53□□□□□ -1.04
TRAPPC6B-202ENST00000347691 TUSC5Q8IXB3 177 aa8.53□□□□□ -1.04
TRAPPC6B-202ENST00000347691 GALMQ96C23 342 aa8.53□□□□□ -1.04
TRAPPC6B-202ENST00000347691 WDYHV1Q96HA8 205 aa8.53□□□□□ -1.04
TRAPPC6B-202ENST00000347691 CNTRLQ7Z7A1 2325 aa8.53□□□□□ -1.04
TRAPPC6B-202ENST00000347691 SDK2Q58EX2 2172 aa8.52□□□□□ -1.04
TRAPPC6B-202ENST00000347691 SCGB1D1O95968 90 aa8.52□□□□□ -1.04
TRAPPC6B-202ENST00000347691 LHX2P50458 406 aa8.52□□□□□ -1.04
TRAPPC6B-202ENST00000347691 MRPL49Q13405 166 aaKnown RBP8.52□□□□□ -1.04
TRAPPC6B-202ENST00000347691 SSPNQ14714 243 aa8.52□□□□□ -1.04
TRAPPC6B-202ENST00000347691 RTP5Q14D33 572 aa8.52□□□□□ -1.04
TRAPPC6B-202ENST00000347691 DEPPQ9NTK1 212 aa8.52□□□□□ -1.04
TRAPPC6B-202ENST00000347691 WASF3Q9UPY6 502 aa8.52□□□□□ -1.04
TRAPPC6B-202ENST00000347691 PI4KAP42356 2102 aa8.52□□□□□ -1.05
TRAPPC6B-202ENST00000347691 A0A0U1RQK1 487 aa8.52□□□□□ -1.05
TRAPPC6B-202ENST00000347691 MDFIC2A0A1B0GVS7 189 aa8.52□□□□□ -1.05
TRAPPC6B-202ENST00000347691 ODAMA1E959 279 aa8.52□□□□□ -1.05
TRAPPC6B-202ENST00000347691 ZNF320A2RRD8 509 aa8.52□□□□□ -1.05
TRAPPC6B-202ENST00000347691 PMS2P5A8MQ11 134 aa8.52□□□□□ -1.05
TRAPPC6B-202ENST00000347691 NXPH2O95156 264 aa8.52□□□□□ -1.05
TRAPPC6B-202ENST00000347691 CCL4P13236 92 aa8.52□□□□□ -1.05
TRAPPC6B-202ENST00000347691 CA6P23280 308 aa8.52□□□□□ -1.05
TRAPPC6B-202ENST00000347691 IL3RAP26951 378 aa8.52□□□□□ -1.05
TRAPPC6B-202ENST00000347691 UBE2NP61088 152 aaKnown RBP8.52□□□□□ -1.05
TRAPPC6B-202ENST00000347691 ERVK11-1P61568 191 aa8.52□□□□□ -1.05
TRAPPC6B-202ENST00000347691 FAM78BQ5VT40 261 aa8.52□□□□□ -1.05
TRAPPC6B-202ENST00000347691 H2BFWTQ7Z2G1 175 aa8.52□□□□□ -1.05
TRAPPC6B-202ENST00000347691 LINC01551Q86U37 167 aa8.52□□□□□ -1.05
TRAPPC6B-202ENST00000347691 DMRTC2Q8IXT2 367 aaPredicted RBP8.52□□□□□ -1.05
TRAPPC6B-202ENST00000347691 ABI3Q9P2A4 366 aa8.52□□□□□ -1.05
TRAPPC6B-202ENST00000347691 PXMP4Q9Y6I8 212 aa8.52□□□□□ -1.05
TRAPPC6B-202ENST00000347691 UNC80Q8N2C7 3258 aa8.52□□□□□ -1.05
TRAPPC6B-202ENST00000347691 KRASP01116 189 aa8.52□□□□□ -1.05
TRAPPC6B-202ENST00000347691 IGFBP4P22692 258 aa8.52□□□□□ -1.05
TRAPPC6B-202ENST00000347691 RPL15P61313 204 aaKnown RBP8.52□□□□□ -1.05
TRAPPC6B-202ENST00000347691 PAFAH1B2P68402 229 aa8.52□□□□□ -1.05
TRAPPC6B-202ENST00000347691 GABRA6Q16445 453 aa8.52□□□□□ -1.05
TRAPPC6B-202ENST00000347691 KIAA2026Q5HYC2 2103 aa8.52□□□□□ -1.05
TRAPPC6B-202ENST00000347691 TMEM144Q7Z5S9 345 aa8.52□□□□□ -1.05
TRAPPC6B-202ENST00000347691 NAGKQ9UJ70 344 aa8.52□□□□□ -1.05
TRAPPC6B-202ENST00000347691 KIR2DL5BA0A0G2JN68 375 aa8.51□□□□□ -1.05
TRAPPC6B-202ENST00000347691 KIR2DL5BA0A0G2JPC4 375 aa8.51□□□□□ -1.05
TRAPPC6B-202ENST00000347691 A0A1W2PPV4 95 aa8.51□□□□□ -1.05
TRAPPC6B-202ENST00000347691 OOEPA6NGQ2 149 aa8.51□□□□□ -1.05
TRAPPC6B-202ENST00000347691 TMEM210A6NLX4 147 aa8.51□□□□□ -1.05
TRAPPC6B-202ENST00000347691 HMGB3O15347 200 aaKnown RBP8.51□□□□□ -1.05
TRAPPC6B-202ENST00000347691 RHBDL1O75783 438 aa8.51□□□□□ -1.05
TRAPPC6B-202ENST00000347691 CLDN18P56856 261 aa8.51□□□□□ -1.05
TRAPPC6B-202ENST00000347691 RANP62826 216 aaKnown RBP8.51□□□□□ -1.05
TRAPPC6B-202ENST00000347691 SRYQ05066 204 aa8.51□□□□□ -1.05
TRAPPC6B-202ENST00000347691 TBC1D28Q2M2D7 210 aa8.51□□□□□ -1.05
TRAPPC6B-202ENST00000347691 KIR2DL5AQ8N109 375 aa8.51□□□□□ -1.05
TRAPPC6B-202ENST00000347691 TMEM204Q9BSN7 226 aa8.51□□□□□ -1.05
TRAPPC6B-202ENST00000347691 OR2D2Q9H210 308 aa8.51□□□□□ -1.05
TRAPPC6B-202ENST00000347691 ZNF703Q9H7S9 590 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC6B-202ENST00000347691 CLN8Q9UBY8 286 aa8.51□□□□□ -1.05
TRAPPC6B-202ENST00000347691 A0A1W2PR80 420 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms