RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 HMGN3Q15651 99 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 Q3ZCU0 254 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 SPANXN5Q5MJ07 72 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 LEAP2Q969E1 77 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 IFT22Q9H7X7 185 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 BIN3Q9NQY0 253 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 TREM2Q9NZC2 230 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 GNG13Q9P2W3 67 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 B4GALT7Q9UBV7 327 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 KCNS2Q9ULS6 477 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 MPC1Q9Y5U8 109 aa5.05□□□□□ -1.6
CLCN3-201ENST00000347613 IGHV3OR15-7A0A075B7D8 119 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 TRAV3A0A0B4J244 114 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 OR5H1A6NKK0 313 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 ZFP92A6NM28 416 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 IFNL4K9M1U5 179 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 PHOX2AO14813 284 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 ZG16O60844 167 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 CEACAM1P13688 526 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 ELLP55199 621 aaPredicted RBP5.04□□□□□ -1.6
CLCN3-201ENST00000347613 EIF5AP63241 154 aaKnown RBP5.04□□□□□ -1.6
CLCN3-201ENST00000347613 WDR82Q6UXN9 313 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 CNEP1R1Q8N9A8 125 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 ABHD5Q8WTS1 349 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 SNRNP40Q96DI7 357 aaKnown RBP5.04□□□□□ -1.6
CLCN3-201ENST00000347613 HIST1H2AAQ96QV6 131 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 AGMATQ9BSE5 352 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 OPN3Q9H1Y3 402 aaPredicted RBP5.04□□□□□ -1.6
CLCN3-201ENST00000347613 RBKSQ9H477 322 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 FAM86C1Q9NVL1 165 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 ZNRD1Q9P1U0 126 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 WIPI2Q9Y4P8 454 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 TNCP24821 2201 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 YLPM1P49750 1951 aaKnown RBP5.04□□□□□ -1.6
CLCN3-201ENST00000347613 KIR2DS1A0A191URI9 304 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 A0A1B0GW64 132 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 TM4SF5O14894 197 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 SYNGR2O43760 224 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 NXPH2O95156 264 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 HAND1O96004 215 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 MYOD1P15172 320 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 PAX6P26367 422 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 KIR2DS4P43632 304 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 VAMP2P63027 116 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 PLP2Q04941 152 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 KIR2DS1Q14954 304 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 SOHLH1Q5JUK2 328 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 OR8G2PQ6IF36 304 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 ZNF429Q86V71 674 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 CMTM1Q8IZ96 169 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 FAM185AQ8N0U4 392 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 CA5BP1Q8WTZ4 195 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 C1orf159Q96HA4 380 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 RCC1LQ96I51 464 aaKnown RBP5.04□□□□□ -1.6
CLCN3-201ENST00000347613 PKIBQ9C010 78 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 OR2D2Q9H210 308 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 PSENENQ9NZ42 101 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 ODAMA1E959 279 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 OR5B21A6NL26 309 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 KLRC4-KLRK1H3BQV0 150 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 OR2C1O95371 312 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 HBZP02008 142 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 MT-ND4LP03901 98 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 SERPINE2P07093 398 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 CECR9P0C854 216 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 NPPCP23582 126 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 CD81P60033 236 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 CLEC12BQ2HXU8 276 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 FAM180AQ6UWF9 173 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 MCEMP1Q8IX19 187 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 ZNF610Q8N9Z0 462 aa5.04□□□□□ -1.6
CLCN3-201ENST00000347613 STRAPQ9Y3F4 350 aaKnown RBP5.04□□□□□ -1.6
CLCN3-201ENST00000347613 LOC102723971A0A1B0GUV8 181 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 LRP5LA4QPB2 252 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 SLC31A2O15432 143 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 TNFSF13O75888 250 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 IGKV3-15P01624 115 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 MAS1LP35410 378 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 RTP5Q14D33 572 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 ZNF506Q5JVG8 444 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 TMEM170AQ8WVE7 144 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 BCL2L14Q9BZR8 327 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 TUBA4BQ9H853 241 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 GSN-AS1Q9NRJ2 163 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 KLF13Q9Y2Y9 288 aaPredicted RBP5.03□□□□□ -1.6
CLCN3-201ENST00000347613 ZNF318Q5VUA4 2279 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 IGHV1-18A0A0C4DH31 117 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 A0A1B0GU03 582 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 UBE2L5PA0A1B0GUS4 154 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 IQCF6A8MYZ5 107 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 NPIPB11E5RHQ5 1161 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 HSPA12AO43301 675 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 TRGC2P03986 189 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 SOD3P08294 240 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 OR9G9P0C7N8 305 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 GZMHP20718 246 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 UBE2KP61086 200 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 RPL23AP62750 156 aaKnown RBP5.03□□□□□ -1.6
CLCN3-201ENST00000347613 COL10A1Q03692 680 aa5.03□□□□□ -1.6
CLCN3-201ENST00000347613 ZNF266Q14584 549 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms