RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 COL8A1P27658 744 aa8.99□□□□□ -0.97
ECM1-201ENST00000346569 DUTP33316 252 aaKnown RBP8.99□□□□□ -0.97
ECM1-201ENST00000346569 PDLIM4P50479 330 aa8.99□□□□□ -0.97
ECM1-201ENST00000346569 TMEM268Q5VZI3 342 aa8.99□□□□□ -0.97
ECM1-201ENST00000346569 SLC35G3Q8N808 338 aa8.99□□□□□ -0.97
ECM1-201ENST00000346569 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.99□□□□□ -0.97
ECM1-201ENST00000346569 OR51H1Q8NH63 302 aa8.99□□□□□ -0.97
ECM1-201ENST00000346569 PPP1R1CQ8WVI7 109 aa8.99□□□□□ -0.97
ECM1-201ENST00000346569 RBPMSQ93062 196 aaKnown RBP8.99□□□□□ -0.97
ECM1-201ENST00000346569 HSD17B10Q99714 261 aaKnown RBP8.99□□□□□ -0.97
ECM1-201ENST00000346569 ABHD14AQ9BUJ0 271 aa8.99□□□□□ -0.97
ECM1-201ENST00000346569 PDCD10Q9BUL8 212 aa8.99□□□□□ -0.97
ECM1-201ENST00000346569 RNF126Q9BV68 326 aa8.99□□□□□ -0.97
ECM1-201ENST00000346569 YLPM1P49750 1951 aaKnown RBP8.99□□□□□ -0.97
ECM1-201ENST00000346569 A0A1W2PPE3 182 aa8.98□□□□□ -0.97
ECM1-201ENST00000346569 HMSDA8MTL9 139 aa8.98□□□□□ -0.97
ECM1-201ENST00000346569 RAB29O14966 203 aa8.98□□□□□ -0.97
ECM1-201ENST00000346569 IGHV1-8P0DP01 117 aa8.98□□□□□ -0.97
ECM1-201ENST00000346569 RPA2P15927 270 aa8.98□□□□□ -0.97
ECM1-201ENST00000346569 PSMB6P28072 239 aa8.98□□□□□ -0.97
ECM1-201ENST00000346569 GPR12P47775 334 aa8.98□□□□□ -0.97
ECM1-201ENST00000346569 LINC00205P59089 165 aa8.98□□□□□ -0.97
ECM1-201ENST00000346569 GNB2P62879 340 aa8.98□□□□□ -0.97
ECM1-201ENST00000346569 FGL1Q08830 312 aa8.98□□□□□ -0.97
ECM1-201ENST00000346569 LGALSLQ3ZCW2 172 aaPredicted RBP8.98□□□□□ -0.97
ECM1-201ENST00000346569 NCR3LG1Q68D85 454 aa8.98□□□□□ -0.97
ECM1-201ENST00000346569 HIST2H2BCQ6DN03 193 aa8.98□□□□□ -0.97
ECM1-201ENST00000346569 TMEM65Q6PI78 240 aa8.98□□□□□ -0.97
ECM1-201ENST00000346569 ZNF695Q8IW36 515 aa8.98□□□□□ -0.97
ECM1-201ENST00000346569 DRAXINQ8NBI3 349 aaPredicted RBP8.98□□□□□ -0.97
ECM1-201ENST00000346569 RAB39BQ96DA2 213 aa8.98□□□□□ -0.97
ECM1-201ENST00000346569 BPESC1Q9GZL8 116 aa8.98□□□□□ -0.97
ECM1-201ENST00000346569 LIN7CQ9NUP9 197 aaKnown RBP8.98□□□□□ -0.97
ECM1-201ENST00000346569 BOLA1Q9Y3E2 137 aa8.98□□□□□ -0.97
ECM1-201ENST00000346569 LOC105371242A0A075B767 164 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 PIGBOS1A0A0B4J2F0 54 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 KIAA1324LA8MWY0 1029 aaPredicted RBP8.97□□□□□ -0.97
ECM1-201ENST00000346569 VWC2LB2RUY7 222 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 H0YIZ8 118 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 J3QR06 171 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 TACC2O95359 2948 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 MPC2O95563 127 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 SERPINE2P07093 398 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 LIPFP07098 398 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 LYL1P12980 280 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 VDAC1P21796 283 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 ZFP36P26651 326 aaKnown RBP8.97□□□□□ -0.97
ECM1-201ENST00000346569 LPAR6P43657 344 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 PAX2Q02962 417 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 IAH1Q2TAA2 248 aaPredicted RBP8.97□□□□□ -0.97
ECM1-201ENST00000346569 ESCO2Q56NI9 601 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 RPL39P5Q59GN2 51 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 NMSQ5H8A3 153 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 C11orf87Q6NUJ2 197 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 BTNL3Q6UXE8 466 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 C9orf62Q8N4C0 152 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 Q8N7P7 452 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 ZBTB8BQ8NAP8 495 aaPredicted RBP8.97□□□□□ -0.97
ECM1-201ENST00000346569 DDB2Q92466 427 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 LSM10Q969L4 123 aaKnown RBP8.97□□□□□ -0.97
ECM1-201ENST00000346569 SSBP3Q9BWW4 388 aaPredicted RBP8.97□□□□□ -0.97
ECM1-201ENST00000346569 BARX1Q9HBU1 254 aaPredicted RBP8.97□□□□□ -0.97
ECM1-201ENST00000346569 SESN1Q9Y6P5 492 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 APCP25054 2843 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 SPG11Q96JI7 2443 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 A0A1W2PPH5 198 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 NDUFS8O00217 210 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 RAMP3O60896 148 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 SNAPC5O75971 98 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 SLC25A6P12236 298 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 ATP5J2P56134 94 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 CATR1Q13166 79 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 C1orf122Q6ZSJ8 110 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 SPAG16Q8N0X2 631 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 ABHD12Q8N2K0 398 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 OR4D5Q8NGN0 318 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 CLDND2Q8NHS1 167 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 C10orf105Q8TEF2 133 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 TCTEX1D2Q8WW35 142 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 NRGNQ92686 78 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 ST6GALNAC6Q969X2 333 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 GPR146Q96CH1 333 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 GSX2Q9BZM3 304 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 TMEM133Q9H2Q1 129 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 NARFLQ9H6Q4 476 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 PLSCR3Q9NRY6 295 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 COMMD9Q9P000 198 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 GSKIPQ9P0R6 139 aa8.97□□□□□ -0.97
ECM1-201ENST00000346569 POLR3KQ9Y2Y1 108 aaPredicted RBP8.97□□□□□ -0.97
ECM1-201ENST00000346569 SAA2-SAA4A0A096LPE2 208 aa8.96□□□□□ -0.98
ECM1-201ENST00000346569 A0A0G2JRQ6 117 aa8.96□□□□□ -0.98
ECM1-201ENST00000346569 A8MXK9 166 aa8.96□□□□□ -0.98
ECM1-201ENST00000346569 M0R1W7 72 aa8.96□□□□□ -0.98
ECM1-201ENST00000346569 M0R1X1 148 aa8.96□□□□□ -0.98
ECM1-201ENST00000346569 RBFOX2O43251 390 aaKnown RBP eCLIP8.96□□□□□ -0.98
ECM1-201ENST00000346569 PITX3O75364 302 aa8.96□□□□□ -0.98
ECM1-201ENST00000346569 IGKV1-5P01602 117 aa8.96□□□□□ -0.98
ECM1-201ENST00000346569 P0C879 139 aa8.96□□□□□ -0.98
ECM1-201ENST00000346569 SAA2P0DJI9 122 aaPredicted RBP8.96□□□□□ -0.98
ECM1-201ENST00000346569 CT45A6P0DMU7 189 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms