RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 RAB40CQ96S21 281 aa11.71□□□□□ -0.53
CDK5RAP1-202ENST00000346416 HRH4Q9H3N8 390 aa11.71□□□□□ -0.53
CDK5RAP1-202ENST00000346416 NCOR1P1Q9H4R4 102 aa11.71□□□□□ -0.53
CDK5RAP1-202ENST00000346416 ZNF665Q9H7R5 613 aa11.71□□□□□ -0.53
CDK5RAP1-202ENST00000346416 MMP24Q9Y5R2 645 aa11.71□□□□□ -0.53
CDK5RAP1-202ENST00000346416 ANKHD1Q8IWZ3 2542 aaKnown RBP11.71□□□□□ -0.54
CDK5RAP1-202ENST00000346416 LRRC30A6NM36 301 aa11.71□□□□□ -0.54
CDK5RAP1-202ENST00000346416 LINC00473A8K010 186 aa11.71□□□□□ -0.54
CDK5RAP1-202ENST00000346416 H3BP45 60 aa11.71□□□□□ -0.54
CDK5RAP1-202ENST00000346416 CCL21O00585 134 aa11.71□□□□□ -0.54
CDK5RAP1-202ENST00000346416 SYNGR2O43760 224 aa11.71□□□□□ -0.54
CDK5RAP1-202ENST00000346416 IGHV3-7P01780 117 aa11.71□□□□□ -0.54
CDK5RAP1-202ENST00000346416 APOC3P02656 99 aa11.71□□□□□ -0.54
CDK5RAP1-202ENST00000346416 C1QTNF9P0C862 333 aa11.71□□□□□ -0.54
CDK5RAP1-202ENST00000346416 G6PCP35575 357 aa11.71□□□□□ -0.54
CDK5RAP1-202ENST00000346416 BAXQ07812 192 aa11.71□□□□□ -0.54
CDK5RAP1-202ENST00000346416 BTN1A1Q13410 526 aa11.71□□□□□ -0.54
CDK5RAP1-202ENST00000346416 ZNF66Q6ZN08 573 aa11.71□□□□□ -0.54
CDK5RAP1-202ENST00000346416 TMEM217Q8N7C4 229 aa11.71□□□□□ -0.54
CDK5RAP1-202ENST00000346416 BPIFCQ8NFQ6 507 aa11.71□□□□□ -0.54
CDK5RAP1-202ENST00000346416 NEUROG1Q92886 237 aa11.71□□□□□ -0.54
CDK5RAP1-202ENST00000346416 HSD17B10Q99714 261 aaKnown RBP11.71□□□□□ -0.54
CDK5RAP1-202ENST00000346416 SH3BGRL3Q9H299 93 aa11.71□□□□□ -0.54
CDK5RAP1-202ENST00000346416 SAP30LQ9HAJ7 183 aa11.71□□□□□ -0.54
CDK5RAP1-202ENST00000346416 MMP26Q9NRE1 261 aa11.71□□□□□ -0.54
CDK5RAP1-202ENST00000346416 FAM212BQ9NTI7 297 aaPredicted RBP11.71□□□□□ -0.54
CDK5RAP1-202ENST00000346416 TANC2Q9HCD6 1990 aa11.7□□□□□ -0.54
CDK5RAP1-202ENST00000346416 FAM90A27PA6NNH2 459 aa11.7□□□□□ -0.54
CDK5RAP1-202ENST00000346416 E7EQL1 145 aa11.7□□□□□ -0.54
CDK5RAP1-202ENST00000346416 S1PR2O95136 353 aa11.7□□□□□ -0.54
CDK5RAP1-202ENST00000346416 GPR12P47775 334 aa11.7□□□□□ -0.54
CDK5RAP1-202ENST00000346416 ZNF134P52741 427 aa11.7□□□□□ -0.54
CDK5RAP1-202ENST00000346416 RPL23AP62750 156 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP1-202ENST00000346416 ZNF266Q14584 549 aa11.7□□□□□ -0.54
CDK5RAP1-202ENST00000346416 C17orf58Q2M2W7 97 aa11.7□□□□□ -0.54
CDK5RAP1-202ENST00000346416 TCTEX1D1Q8N7M0 179 aa11.7□□□□□ -0.54
CDK5RAP1-202ENST00000346416 NARS2Q96I59 477 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP1-202ENST00000346416 EGLN1Q9GZT9 426 aa11.7□□□□□ -0.54
CDK5RAP1-202ENST00000346416 FAM234AQ9H0X4 552 aa11.7□□□□□ -0.54
CDK5RAP1-202ENST00000346416 WSB1Q9Y6I7 421 aa11.7□□□□□ -0.54
CDK5RAP1-202ENST00000346416 PROP1O75360 226 aa11.69□□□□□ -0.54
CDK5RAP1-202ENST00000346416 CLDN14O95500 239 aa11.69□□□□□ -0.54
CDK5RAP1-202ENST00000346416 CHRNB4P30926 498 aa11.69□□□□□ -0.54
CDK5RAP1-202ENST00000346416 DYNLT3P51808 116 aa11.69□□□□□ -0.54
CDK5RAP1-202ENST00000346416 BLOC1S1P78537 153 aa11.69□□□□□ -0.54
CDK5RAP1-202ENST00000346416 AKR1C1Q04828 323 aa11.69□□□□□ -0.54
CDK5RAP1-202ENST00000346416 RNASE6Q93091 150 aaKnown RBP11.69□□□□□ -0.54
CDK5RAP1-202ENST00000346416 COA4Q9NYJ1 87 aa11.69□□□□□ -0.54
CDK5RAP1-202ENST00000346416 COL6A6A6NMZ7 2263 aa11.69□□□□□ -0.54
CDK5RAP1-202ENST00000346416 TRGV10A0A0A0MS01 117 aa11.69□□□□□ -0.54
CDK5RAP1-202ENST00000346416 KBTBD11-OT1A0A1B0GTJ5 212 aa11.69□□□□□ -0.54
CDK5RAP1-202ENST00000346416 LOC105371267A0A1B0GV96 52 aa11.69□□□□□ -0.54
CDK5RAP1-202ENST00000346416 TOR1AO14656 332 aa11.69□□□□□ -0.54
CDK5RAP1-202ENST00000346416 SIGLEC5O15389 551 aa11.69□□□□□ -0.54
CDK5RAP1-202ENST00000346416 TMPRSS2O15393 492 aa11.69□□□□□ -0.54
CDK5RAP1-202ENST00000346416 TXNL1O43396 289 aa11.69□□□□□ -0.54
CDK5RAP1-202ENST00000346416 P0C879 139 aa11.69□□□□□ -0.54
CDK5RAP1-202ENST00000346416 SWI5Q1ZZU3 235 aa11.69□□□□□ -0.54
CDK5RAP1-202ENST00000346416 UTF1Q5T230 341 aa11.69□□□□□ -0.54
CDK5RAP1-202ENST00000346416 Q6ZRG5 221 aa11.69□□□□□ -0.54
CDK5RAP1-202ENST00000346416 LINC01560Q8TB33 94 aa11.69□□□□□ -0.54
CDK5RAP1-202ENST00000346416 KCNJ16Q9NPI9 418 aa11.69□□□□□ -0.54
CDK5RAP1-202ENST00000346416 PARP11Q9NR21 331 aa11.69□□□□□ -0.54
CDK5RAP1-202ENST00000346416 CLN8Q9UBY8 286 aa11.69□□□□□ -0.54
CDK5RAP1-202ENST00000346416 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.68□□□□□ -0.54
CDK5RAP1-202ENST00000346416 ATG12O94817 140 aa11.68□□□□□ -0.54
CDK5RAP1-202ENST00000346416 DANCRP0C864 163 aa11.68□□□□□ -0.54
CDK5RAP1-202ENST00000346416 IAPPP10997 89 aa11.68□□□□□ -0.54
CDK5RAP1-202ENST00000346416 DUTP33316 252 aaKnown RBP11.68□□□□□ -0.54
CDK5RAP1-202ENST00000346416 PJVKQ0ZLH3 352 aa11.68□□□□□ -0.54
CDK5RAP1-202ENST00000346416 FBXL19-AS1Q494R0 122 aa11.68□□□□□ -0.54
CDK5RAP1-202ENST00000346416 NCR3LG1Q68D85 454 aa11.68□□□□□ -0.54
CDK5RAP1-202ENST00000346416 IL34Q6ZMJ4 242 aa11.68□□□□□ -0.54
CDK5RAP1-202ENST00000346416 TCF23Q7RTU1 214 aa11.68□□□□□ -0.54
CDK5RAP1-202ENST00000346416 STX12Q86Y82 276 aa11.68□□□□□ -0.54
CDK5RAP1-202ENST00000346416 FAM216AQ8WUB2 273 aa11.68□□□□□ -0.54
CDK5RAP1-202ENST00000346416 MS4A7Q9GZW8 240 aaPredicted RBP11.68□□□□□ -0.54
CDK5RAP1-202ENST00000346416 RAB9BQ9NP90 201 aa11.68□□□□□ -0.54
CDK5RAP1-202ENST00000346416 ITPR1Q14643 2758 aa11.68□□□□□ -0.54
CDK5RAP1-202ENST00000346416 ARFGEF3Q5TH69 2177 aa11.68□□□□□ -0.54
CDK5RAP1-202ENST00000346416 CD3EP07766 207 aa11.68□□□□□ -0.54
CDK5RAP1-202ENST00000346416 GRNP28799 593 aaKnown RBP11.68□□□□□ -0.54
CDK5RAP1-202ENST00000346416 ID4P47928 161 aa11.68□□□□□ -0.54
CDK5RAP1-202ENST00000346416 SULT1A1P50225 295 aa11.68□□□□□ -0.54
CDK5RAP1-202ENST00000346416 SRSF3P84103 164 aaKnown RBP11.68□□□□□ -0.54
CDK5RAP1-202ENST00000346416 TMEM267Q0VDI3 215 aaPredicted RBP11.68□□□□□ -0.54
CDK5RAP1-202ENST00000346416 BTNL8Q6UX41 500 aa11.68□□□□□ -0.54
CDK5RAP1-202ENST00000346416 CCL17Q92583 94 aa11.68□□□□□ -0.54
CDK5RAP1-202ENST00000346416 LEAP2Q969E1 77 aa11.68□□□□□ -0.54
CDK5RAP1-202ENST00000346416 IFI27L2Q9H2X8 130 aa11.68□□□□□ -0.54
CDK5RAP1-202ENST00000346416 DYNLRB1Q9NP97 96 aa11.68□□□□□ -0.54
CDK5RAP1-202ENST00000346416 PSENENQ9NZ42 101 aa11.68□□□□□ -0.54
CDK5RAP1-202ENST00000346416 NDRG3Q9UGV2 375 aa11.68□□□□□ -0.54
CDK5RAP1-202ENST00000346416 TRAV38-1A0A0B4J264 116 aa11.67□□□□□ -0.54
CDK5RAP1-202ENST00000346416 FAM90A26D6RGX4 464 aa11.67□□□□□ -0.54
CDK5RAP1-202ENST00000346416 TMEM178BH3BS89 294 aa11.67□□□□□ -0.54
CDK5RAP1-202ENST00000346416 TSPAN4O14817 238 aa11.67□□□□□ -0.54
CDK5RAP1-202ENST00000346416 SLC31A2O15432 143 aa11.67□□□□□ -0.54
CDK5RAP1-202ENST00000346416 F2RL1P55085 397 aa11.67□□□□□ -0.54
CDK5RAP1-202ENST00000346416 UBE2KP61086 200 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms