RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 YIPF6Q96EC8 236 aa12.66□□□□□ -0.38
ATG4B-201ENST00000344376 HSPB9Q9BQS6 159 aa12.66□□□□□ -0.38
ATG4B-201ENST00000344376 CHCHD6Q9BRQ6 235 aa12.66□□□□□ -0.38
ATG4B-201ENST00000344376 AGMATQ9BSE5 352 aa12.66□□□□□ -0.38
ATG4B-201ENST00000344376 CENPOQ9BU64 300 aa12.66□□□□□ -0.38
ATG4B-201ENST00000344376 OR51E2Q9H255 320 aa12.66□□□□□ -0.38
ATG4B-201ENST00000344376 RDH8Q9NYR8 311 aa12.66□□□□□ -0.38
ATG4B-201ENST00000344376 DAPK2Q9UIK4 370 aa12.66□□□□□ -0.38
ATG4B-201ENST00000344376 LOC100506127A0A0U1RQW1 187 aa12.65□□□□□ -0.38
ATG4B-201ENST00000344376 H7C2Y5 167 aa12.65□□□□□ -0.38
ATG4B-201ENST00000344376 DIRAS3O95661 229 aa12.65□□□□□ -0.38
ATG4B-201ENST00000344376 CT45A6P0DMU7 189 aa12.65□□□□□ -0.38
ATG4B-201ENST00000344376 CT45A5P0DMU8 189 aa12.65□□□□□ -0.38
ATG4B-201ENST00000344376 CT45A7P0DMV0 189 aa12.65□□□□□ -0.38
ATG4B-201ENST00000344376 CXorf66Q5JRM2 361 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-201ENST00000344376 KPRPQ5T749 579 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-201ENST00000344376 SFXN4Q6P4A7 337 aa12.65□□□□□ -0.38
ATG4B-201ENST00000344376 LINC00299Q6ZSB3 139 aa12.65□□□□□ -0.38
ATG4B-201ENST00000344376 DRAXINQ8NBI3 349 aaPredicted RBP12.65□□□□□ -0.38
ATG4B-201ENST00000344376 WFDC9Q8NEX5 89 aa12.65□□□□□ -0.38
ATG4B-201ENST00000344376 RBMXL1Q96E39 390 aaKnown RBP12.65□□□□□ -0.38
ATG4B-201ENST00000344376 ZNF580Q9UK33 172 aa12.65□□□□□ -0.38
ATG4B-201ENST00000344376 WASHC3Q9Y3C0 194 aa12.65□□□□□ -0.38
ATG4B-201ENST00000344376 IGKV1-6A0A0C4DH72 117 aa12.64□□□□□ -0.39
ATG4B-201ENST00000344376 A0A1B0GVG6 124 aa12.64□□□□□ -0.39
ATG4B-201ENST00000344376 BET1O15155 118 aa12.64□□□□□ -0.39
ATG4B-201ENST00000344376 RBBP9O75884 186 aa12.64□□□□□ -0.39
ATG4B-201ENST00000344376 HLA-DRB1P01911 266 aa12.64□□□□□ -0.39
ATG4B-201ENST00000344376 GSTP1P09211 210 aaKnown RBP12.64□□□□□ -0.39
ATG4B-201ENST00000344376 FOXE3Q13461 319 aa12.64□□□□□ -0.39
ATG4B-201ENST00000344376 OXLD1Q5BKU9 147 aa12.64□□□□□ -0.39
ATG4B-201ENST00000344376 KLHL30-AS1Q8NEE0 82 aa12.64□□□□□ -0.39
ATG4B-201ENST00000344376 NPBQ8NG41 125 aa12.64□□□□□ -0.39
ATG4B-201ENST00000344376 OR10J5Q8NHC4 309 aa12.64□□□□□ -0.39
ATG4B-201ENST00000344376 CABLES2Q9BTV7 478 aa12.64□□□□□ -0.39
ATG4B-201ENST00000344376 RNF150Q9ULK6 438 aa12.64□□□□□ -0.39
ATG4B-201ENST00000344376 H0YJW9 148 aa12.64□□□□□ -0.39
ATG4B-201ENST00000344376 IGF1P05019 195 aa12.64□□□□□ -0.39
ATG4B-201ENST00000344376 ELANEP08246 267 aa12.64□□□□□ -0.39
ATG4B-201ENST00000344376 CD36P16671 472 aa12.64□□□□□ -0.39
ATG4B-201ENST00000344376 SDC2P34741 201 aa12.64□□□□□ -0.39
ATG4B-201ENST00000344376 PLGLAQ15195 96 aa12.64□□□□□ -0.39
ATG4B-201ENST00000344376 CTF1Q16619 201 aa12.64□□□□□ -0.39
ATG4B-201ENST00000344376 C5orf64Q2M2E5 130 aa12.64□□□□□ -0.39
ATG4B-201ENST00000344376 GLDNQ6ZMI3 551 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-201ENST00000344376 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-201ENST00000344376 NAA50Q9GZZ1 169 aaKnown RBP12.64□□□□□ -0.39
ATG4B-201ENST00000344376 NDUFA3O95167 84 aa12.63□□□□□ -0.39
ATG4B-201ENST00000344376 APOA2P02652 100 aa12.63□□□□□ -0.39
ATG4B-201ENST00000344376 GSTT2P0CG29 244 aa12.63□□□□□ -0.39
ATG4B-201ENST00000344376 GSTT2BP0CG30 244 aa12.63□□□□□ -0.39
ATG4B-201ENST00000344376 DTYMKP23919 212 aa12.63□□□□□ -0.39
ATG4B-201ENST00000344376 CNTFRP26992 372 aa12.63□□□□□ -0.39
ATG4B-201ENST00000344376 MXD1Q05195 221 aa12.63□□□□□ -0.39
ATG4B-201ENST00000344376 SRSF7Q16629 238 aaKnown RBP eCLIP12.63□□□□□ -0.398e-7■□□□□ 11.3
ATG4B-201ENST00000344376 TIMM50Q3ZCQ8 353 aa12.63□□□□□ -0.39
ATG4B-201ENST00000344376 CDNFQ49AH0 187 aa12.63□□□□□ -0.39
ATG4B-201ENST00000344376 IGSF11Q5DX21 431 aa12.63□□□□□ -0.39
ATG4B-201ENST00000344376 LIN54Q6MZP7 749 aa12.63□□□□□ -0.39
ATG4B-201ENST00000344376 REC114Q7Z4M0 266 aa12.63□□□□□ -0.39
ATG4B-201ENST00000344376 ZNF695Q8IW36 515 aa12.63□□□□□ -0.39
ATG4B-201ENST00000344376 OR5AN1Q8NGI8 311 aa12.63□□□□□ -0.39
ATG4B-201ENST00000344376 LGALS14Q8TCE9 139 aa12.63□□□□□ -0.39
ATG4B-201ENST00000344376 MAFIPQ8WZ33 124 aa12.63□□□□□ -0.39
ATG4B-201ENST00000344376 RCC1LQ96I51 464 aaKnown RBP12.63□□□□□ -0.39
ATG4B-201ENST00000344376 RITA1Q96K30 269 aa12.63□□□□□ -0.39
ATG4B-201ENST00000344376 RNF5Q99942 180 aa12.63□□□□□ -0.39
ATG4B-201ENST00000344376 GINS4Q9BRT9 223 aa12.63□□□□□ -0.39
ATG4B-201ENST00000344376 TOLLIPQ9H0E2 274 aa12.63□□□□□ -0.39
ATG4B-201ENST00000344376 OR51J1Q9H342 316 aa12.63□□□□□ -0.39
ATG4B-201ENST00000344376 PARP11Q9NR21 331 aa12.63□□□□□ -0.39
ATG4B-201ENST00000344376 ZNF230Q9UIE0 474 aaPredicted RBP12.63□□□□□ -0.39
ATG4B-201ENST00000344376 TRBV6-7A0A0A0MS04 114 aa12.62□□□□□ -0.39
ATG4B-201ENST00000344376 DUS4LO95620 317 aaKnown RBP12.62□□□□□ -0.39
ATG4B-201ENST00000344376 SNRPBP14678 240 aaKnown RBP12.62□□□□□ -0.39
ATG4B-201ENST00000344376 IGLL1P15814 213 aa12.62□□□□□ -0.39
ATG4B-201ENST00000344376 SCAND1P57086 179 aa12.62□□□□□ -0.39
ATG4B-201ENST00000344376 Q6ZS49 121 aa12.62□□□□□ -0.39
ATG4B-201ENST00000344376 C8orf86Q6ZUL3 223 aa12.62□□□□□ -0.39
ATG4B-201ENST00000344376 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.62□□□□□ -0.39
ATG4B-201ENST00000344376 NECAP2Q9NVZ3 263 aa12.62□□□□□ -0.39
ATG4B-201ENST00000344376 RBM7Q9Y580 266 aaKnown RBP12.62□□□□□ -0.39
ATG4B-201ENST00000344376 PLXNB1O43157 2135 aa12.62□□□□□ -0.39
ATG4B-201ENST00000344376 M0R1X1 148 aa12.61□□□□□ -0.39
ATG4B-201ENST00000344376 RRHO14718 337 aa12.61□□□□□ -0.39
ATG4B-201ENST00000344376 IGHG4P01861 327 aa12.61□□□□□ -0.39
ATG4B-201ENST00000344376 RPLP1P05386 114 aaKnown RBP12.61□□□□□ -0.39
ATG4B-201ENST00000344376 MYCNOSP40205 109 aa12.61□□□□□ -0.39
ATG4B-201ENST00000344376 THBS3P49746 956 aa12.61□□□□□ -0.39
ATG4B-201ENST00000344376 PITPNAQ00169 270 aa12.61□□□□□ -0.39
ATG4B-201ENST00000344376 CFHR3Q02985 330 aa12.61□□□□□ -0.39
ATG4B-201ENST00000344376 HACD4Q5VWC8 232 aa12.61□□□□□ -0.39
ATG4B-201ENST00000344376 RNF152Q8N8N0 203 aa12.61□□□□□ -0.39
ATG4B-201ENST00000344376 TSNAXQ99598 290 aaKnown RBP12.61□□□□□ -0.39
ATG4B-201ENST00000344376 GPR61Q9BZJ8 451 aa12.61□□□□□ -0.39
ATG4B-201ENST00000344376 OR2D2Q9H210 308 aa12.61□□□□□ -0.39
ATG4B-201ENST00000344376 RHBDL2Q9NX52 303 aa12.61□□□□□ -0.39
ATG4B-201ENST00000344376 ETV7Q9Y603 341 aa12.61□□□□□ -0.39
ATG4B-201ENST00000344376 IGHV7-81A0A0B4J1V7 117 aa12.6□□□□□ -0.39
ATG4B-201ENST00000344376 ATP6V0E1O15342 81 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms