RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 GSTP1P09211 210 aaKnown RBP15.78■□□□□ 0.12
SYNE2-201ENST00000341472 CD3GP09693 182 aa15.78■□□□□ 0.12
SYNE2-201ENST00000341472 KRTAP10-11P60412 298 aa15.78■□□□□ 0.12
SYNE2-201ENST00000341472 GLDNQ6ZMI3 551 aaPredicted RBP15.78■□□□□ 0.12
SYNE2-201ENST00000341472 YIPF6Q96EC8 236 aa15.78■□□□□ 0.12
SYNE2-201ENST00000341472 ZNF221Q9UK13 617 aa15.78■□□□□ 0.12
SYNE2-201ENST00000341472 IGHV7-81A0A0B4J1V7 117 aa15.77■□□□□ 0.12
SYNE2-201ENST00000341472 SHISA3A0PJX4 238 aa15.77■□□□□ 0.12
SYNE2-201ENST00000341472 OR5H14A6NHG9 310 aa15.77■□□□□ 0.12
SYNE2-201ENST00000341472 H7C2Y5 167 aa15.77■□□□□ 0.12
SYNE2-201ENST00000341472 RAB3BP20337 219 aa15.77■□□□□ 0.12
SYNE2-201ENST00000341472 HOXD3P31249 432 aaPredicted RBP15.77■□□□□ 0.12
SYNE2-201ENST00000341472 RAB25P57735 213 aa15.77■□□□□ 0.12
SYNE2-201ENST00000341472 C22orf42Q6IC83 251 aa15.77■□□□□ 0.12
SYNE2-201ENST00000341472 TMEM65Q6PI78 240 aa15.77■□□□□ 0.12
SYNE2-201ENST00000341472 OR5AN1Q8NGI8 311 aa15.77■□□□□ 0.12
SYNE2-201ENST00000341472 PARP11Q9NR21 331 aa15.77■□□□□ 0.12
SYNE2-201ENST00000341472 KCNK7Q9Y2U2 307 aa15.77■□□□□ 0.12
SYNE2-201ENST00000341472 WASHC3Q9Y3C0 194 aa15.77■□□□□ 0.12
SYNE2-201ENST00000341472 IGKV1-6A0A0C4DH72 117 aa15.76■□□□□ 0.11
SYNE2-201ENST00000341472 G3V318 75 aa15.76■□□□□ 0.11
SYNE2-201ENST00000341472 H0YJW9 148 aa15.76■□□□□ 0.11
SYNE2-201ENST00000341472 NDUFA3O95167 84 aa15.76■□□□□ 0.11
SYNE2-201ENST00000341472 RAB6AP20340 208 aa15.76■□□□□ 0.11
SYNE2-201ENST00000341472 GADD45AP24522 165 aa15.76■□□□□ 0.11
SYNE2-201ENST00000341472 PSMB8P28062 276 aa15.76■□□□□ 0.11
SYNE2-201ENST00000341472 SERPINB10P48595 397 aa15.76■□□□□ 0.11
SYNE2-201ENST00000341472 EGFEM1PQ0D2K5 195 aa15.76■□□□□ 0.11
SYNE2-201ENST00000341472 MOGAT2Q3SYC2 334 aa15.76■□□□□ 0.11
SYNE2-201ENST00000341472 ZNF660Q6AZW8 331 aaPredicted RBP15.76■□□□□ 0.11
SYNE2-201ENST00000341472 OR4A4PQ8NGN8 299 aa15.76■□□□□ 0.11
SYNE2-201ENST00000341472 OR10R2Q8NGX6 335 aa15.76■□□□□ 0.11
SYNE2-201ENST00000341472 OR8U1Q8NH10 309 aa15.76■□□□□ 0.11
SYNE2-201ENST00000341472 RNF5Q99942 180 aa15.76■□□□□ 0.11
SYNE2-201ENST00000341472 RDH8Q9NYR8 311 aa15.76■□□□□ 0.11
SYNE2-201ENST00000341472 NDUFA13Q9P0J0 144 aa15.76■□□□□ 0.11
SYNE2-201ENST00000341472 STUB1Q9UNE7 303 aa15.76■□□□□ 0.11
SYNE2-201ENST00000341472 SSR3Q9UNL2 185 aa15.76■□□□□ 0.11
SYNE2-201ENST00000341472 TRAV41A0A0B4J266 112 aa15.75■□□□□ 0.11
SYNE2-201ENST00000341472 METTL21EPA6NDL7 271 aa15.75■□□□□ 0.11
SYNE2-201ENST00000341472 RRHO14718 337 aa15.75■□□□□ 0.11
SYNE2-201ENST00000341472 ATP6V0E1O15342 81 aa15.75■□□□□ 0.11
SYNE2-201ENST00000341472 FABP7O15540 132 aa15.75■□□□□ 0.11
SYNE2-201ENST00000341472 RBBP9O75884 186 aa15.75■□□□□ 0.11
SYNE2-201ENST00000341472 PPIFP30405 207 aaKnown RBP15.75■□□□□ 0.11
SYNE2-201ENST00000341472 DRAXINQ8NBI3 349 aaPredicted RBP15.75■□□□□ 0.11
SYNE2-201ENST00000341472 FUNDC2Q9BWH2 189 aa15.75■□□□□ 0.11
SYNE2-201ENST00000341472 KLK15Q9H2R5 256 aa15.75■□□□□ 0.11
SYNE2-201ENST00000341472 FBXL15Q9H469 300 aa15.75■□□□□ 0.11
SYNE2-201ENST00000341472 ZMAT5Q9UDW3 170 aaKnown RBP15.75■□□□□ 0.11
SYNE2-201ENST00000341472 K7EIL1 84 aa15.74■□□□□ 0.11
SYNE2-201ENST00000341472 RAB27BO00194 218 aa15.74■□□□□ 0.11
SYNE2-201ENST00000341472 PROP1O75360 226 aa15.74■□□□□ 0.11
SYNE2-201ENST00000341472 GNB3P16520 340 aa15.74■□□□□ 0.11
SYNE2-201ENST00000341472 FGF9P31371 208 aaPredicted RBP15.74■□□□□ 0.11
SYNE2-201ENST00000341472 CX3CL1P78423 397 aa15.74■□□□□ 0.11
SYNE2-201ENST00000341472 PLGLAQ15195 96 aa15.74■□□□□ 0.11
SYNE2-201ENST00000341472 DEFB136Q30KP8 78 aa15.74■□□□□ 0.11
SYNE2-201ENST00000341472 DEFB121Q5J5C9 76 aa15.74■□□□□ 0.11
SYNE2-201ENST00000341472 ANKRD13BQ86YJ7 626 aa15.74■□□□□ 0.11
SYNE2-201ENST00000341472 BATF3Q9NR55 127 aa15.74■□□□□ 0.11
SYNE2-201ENST00000341472 A0A075B6Q4 140 aa15.73■□□□□ 0.11
SYNE2-201ENST00000341472 A0A0B4J203 849 aa15.73■□□□□ 0.11
SYNE2-201ENST00000341472 WI2-2373I1.2A0A1W2PRP0 233 aa15.73■□□□□ 0.11
SYNE2-201ENST00000341472 FCN1O00602 326 aa15.73■□□□□ 0.11
SYNE2-201ENST00000341472 AIREO43918 545 aa15.73■□□□□ 0.11
SYNE2-201ENST00000341472 IGLV1-40P01703 118 aa15.73■□□□□ 0.11
SYNE2-201ENST00000341472 GSTT2P0CG29 244 aa15.73■□□□□ 0.11
SYNE2-201ENST00000341472 GSTT2BP0CG30 244 aa15.73■□□□□ 0.11
SYNE2-201ENST00000341472 TALDO1P37837 337 aa15.73■□□□□ 0.11
SYNE2-201ENST00000341472 GPR107Q5VW38 600 aa15.73■□□□□ 0.11
SYNE2-201ENST00000341472 OR5M8Q8NGP6 311 aa15.73■□□□□ 0.11
SYNE2-201ENST00000341472 C4orf3Q8WVX3 66 aa15.73■□□□□ 0.11
SYNE2-201ENST00000341472 UBE2E2Q96LR5 201 aa15.73■□□□□ 0.11
SYNE2-201ENST00000341472 TOLLIPQ9H0E2 274 aa15.73■□□□□ 0.11
SYNE2-201ENST00000341472 VSIG4Q9Y279 399 aa15.73■□□□□ 0.11
SYNE2-201ENST00000341472 SMIM31A0A1B0GVY4 71 aa15.72■□□□□ 0.11
SYNE2-201ENST00000341472 MFNGO00587 321 aa15.72■□□□□ 0.11
SYNE2-201ENST00000341472 BET1O15155 118 aa15.72■□□□□ 0.11
SYNE2-201ENST00000341472 FCGR3AP08637 254 aa15.72■□□□□ 0.11
SYNE2-201ENST00000341472 HIST1H1DP16402 221 aaKnown RBP15.72■□□□□ 0.11
SYNE2-201ENST00000341472 RAB9AP51151 201 aa15.72■□□□□ 0.11
SYNE2-201ENST00000341472 TMBIM6P55061 237 aa15.72■□□□□ 0.11
SYNE2-201ENST00000341472 RPS16P62249 146 aaKnown RBP15.72■□□□□ 0.11
SYNE2-201ENST00000341472 ARFRP1Q13795 201 aa15.72■□□□□ 0.11
SYNE2-201ENST00000341472 KIAA0141Q14154 515 aaPredicted RBP15.72■□□□□ 0.11
SYNE2-201ENST00000341472 CLVS1Q8IUQ0 354 aaPredicted RBP15.72■□□□□ 0.11
SYNE2-201ENST00000341472 ZNF383Q8NA42 475 aa15.72■□□□□ 0.11
SYNE2-201ENST00000341472 MINDY2Q8NBR6 621 aa15.72■□□□□ 0.11
SYNE2-201ENST00000341472 OR10J5Q8NHC4 309 aa15.72■□□□□ 0.11
SYNE2-201ENST00000341472 MYOZ3Q8TDC0 251 aa15.72■□□□□ 0.11
SYNE2-201ENST00000341472 TSNAXQ99598 290 aaKnown RBP15.72■□□□□ 0.11
SYNE2-201ENST00000341472 BCL7BQ9BQE9 202 aa15.72■□□□□ 0.11
SYNE2-201ENST00000341472 ATG5Q9H1Y0 275 aa15.72■□□□□ 0.11
SYNE2-201ENST00000341472 OR51E2Q9H255 320 aa15.72■□□□□ 0.11
SYNE2-201ENST00000341472 TXNL4BQ9NX01 149 aaKnown RBP15.72■□□□□ 0.11
SYNE2-201ENST00000341472 GAB2Q9UQC2 676 aa15.72■□□□□ 0.11
SYNE2-201ENST00000341472 NOTOA8MTQ0 251 aa15.71■□□□□ 0.11
SYNE2-201ENST00000341472 M0R1X1 148 aa15.71■□□□□ 0.11
SYNE2-201ENST00000341472 NOL3O60936 208 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms