RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 MPZL1O95297 269 aa12.11□□□□□ -0.47
PDE4D-203ENST00000340635 SRSF12Q8WXF0 261 aaKnown RBP12.11□□□□□ -0.47
PDE4D-203ENST00000340635 PRR32B1ATL7 298 aa12.11□□□□□ -0.47
PDE4D-203ENST00000340635 C2CD4DB7Z1M9 353 aa12.11□□□□□ -0.47
PDE4D-203ENST00000340635 CYB5R3P00387 301 aaPredicted RBP12.11□□□□□ -0.47
PDE4D-203ENST00000340635 CA1P00915 261 aaPredicted RBP12.11□□□□□ -0.47
PDE4D-203ENST00000340635 TGFAP01135 160 aa12.11□□□□□ -0.47
PDE4D-203ENST00000340635 SEC11BP0C7V7 166 aa12.11□□□□□ -0.47
PDE4D-203ENST00000340635 SSC4DQ8WTU2 575 aa12.11□□□□□ -0.47
PDE4D-203ENST00000340635 TMEM45BQ96B21 275 aa12.11□□□□□ -0.47
PDE4D-203ENST00000340635 TUBGCP6Q96RT7 1819 aa12.1□□□□□ -0.47
PDE4D-203ENST00000340635 C9JCJ5 164 aa12.1□□□□□ -0.47
PDE4D-203ENST00000340635 BCL2P10415 239 aa12.1□□□□□ -0.47
PDE4D-203ENST00000340635 HCP5Q6MZN7 132 aa12.1□□□□□ -0.47
PDE4D-203ENST00000340635 CLDN14O95500 239 aa12.1□□□□□ -0.47
PDE4D-203ENST00000340635 C3AR1Q16581 482 aa12.1□□□□□ -0.47
PDE4D-203ENST00000340635 TYMSP04818 313 aa12.1□□□□□ -0.47
PDE4D-203ENST00000340635 CXorf66Q5JRM2 361 aaPredicted RBP12.1□□□□□ -0.47
PDE4D-203ENST00000340635 ZNF107Q9UII5 783 aaPredicted RBP12.1□□□□□ -0.47
PDE4D-203ENST00000340635 CEACAM5P06731 702 aa12.1□□□□□ -0.47
PDE4D-203ENST00000340635 MAGEA5P43359 124 aa12.1□□□□□ -0.47
PDE4D-203ENST00000340635 TCF23Q7RTU1 214 aa12.1□□□□□ -0.47
PDE4D-203ENST00000340635 SHISA5Q8N114 240 aa12.1□□□□□ -0.47
PDE4D-203ENST00000340635 MESTQ5EB52 335 aa12.1□□□□□ -0.47
PDE4D-203ENST00000340635 PQLC2Q6ZP29 291 aa12.1□□□□□ -0.47
PDE4D-203ENST00000340635 LYZL2Q7Z4W2 148 aa12.1□□□□□ -0.47
PDE4D-203ENST00000340635 CYB561D1Q8N8Q1 229 aa12.1□□□□□ -0.47
PDE4D-203ENST00000340635 PGPA6NDG6 321 aa12.1□□□□□ -0.47
PDE4D-203ENST00000340635 RRHO14718 337 aa12.1□□□□□ -0.47
PDE4D-203ENST00000340635 SOCS1O15524 211 aa12.1□□□□□ -0.47
PDE4D-203ENST00000340635 ADRA2AP08913 450 aa12.1□□□□□ -0.47
PDE4D-203ENST00000340635 HTN3P15516 51 aa12.1□□□□□ -0.47
PDE4D-203ENST00000340635 SELENOTP62341 195 aa12.1□□□□□ -0.47
PDE4D-203ENST00000340635 WFIKKN1Q96NZ8 548 aa12.1□□□□□ -0.47
PDE4D-203ENST00000340635 A0A1B0GTH9 108 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 HOXA5P20719 270 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 HBBP68871 147 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 LINC00615Q96LM1 132 aaPredicted RBP12.09□□□□□ -0.47
PDE4D-203ENST00000340635 TMEM106BQ9NUM4 274 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 CASP8AP2Q9UKL3 1982 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 TRAV8-2A0A0B4J237 113 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 DLL1O00548 723 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 HIKESHIQ53FT3 197 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 Q5PR19 223 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 NEUROG1Q92886 237 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 MARVELD3Q96A59 401 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 METTL12A8MUP2 240 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 RNASEH2CQ8TDP1 164 aaKnown RBP12.09□□□□□ -0.47
PDE4D-203ENST00000340635 GPBAR1Q8TDU6 330 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 CT55Q8WUE5 264 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 OR51M1Q9H341 326 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 CD1AP06126 327 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 SHISA4Q96DD7 197 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 SPTY2D1-AS1A0A0U1RR47 76 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 A0A1B0GV90 55 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 C10orf111Q8N326 155 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 ADAD2Q8NCV1 583 aaKnown RBP12.09□□□□□ -0.47
PDE4D-203ENST00000340635 OR1P1Q8NH06 330 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 ZNF414Q96IQ9 312 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 MAST2Q6P0Q8 1798 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 TRAV30A0A087WSZ9 112 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 RAE1P78406 368 aaKnown RBP12.09□□□□□ -0.47
PDE4D-203ENST00000340635 LRP10Q7Z4F1 713 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 DDA1Q9BW61 102 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 AKAP6Q13023 2319 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 C7orf66A4D0T2 115 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 SAA1P0DJI8 122 aaPredicted RBP12.09□□□□□ -0.47
PDE4D-203ENST00000340635 CKS1BP61024 79 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 ATOH7Q8N100 152 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 RHOVQ96L33 236 aa12.09□□□□□ -0.47
PDE4D-203ENST00000340635 CACNA1DQ01668 2161 aa12.08□□□□□ -0.47
PDE4D-203ENST00000340635 LY6EQ16553 131 aa12.08□□□□□ -0.48
PDE4D-203ENST00000340635 C9orf62Q8N4C0 152 aa12.08□□□□□ -0.48
PDE4D-203ENST00000340635 MDKP21741 143 aaPredicted RBP12.08□□□□□ -0.48
PDE4D-203ENST00000340635 BIVMQ86UB2 503 aa12.08□□□□□ -0.48
PDE4D-203ENST00000340635 TMEM174Q8WUU8 243 aa12.08□□□□□ -0.48
PDE4D-203ENST00000340635 MRPL24Q96A35 216 aaKnown RBP12.08□□□□□ -0.48
PDE4D-203ENST00000340635 ST6GAL2Q96JF0 529 aa12.08□□□□□ -0.48
PDE4D-203ENST00000340635 LDLRAD4O15165 306 aa12.08□□□□□ -0.48
PDE4D-203ENST00000340635 IGHV4-39P01824 125 aa12.08□□□□□ -0.48
PDE4D-203ENST00000340635 IGF2P01344 180 aa12.08□□□□□ -0.48
PDE4D-203ENST00000340635 SERF2P84101 59 aa12.08□□□□□ -0.48
PDE4D-203ENST00000340635 SRSF5Q13243 272 aaKnown RBP12.08□□□□□ -0.48
PDE4D-203ENST00000340635 ZNF345Q14585 488 aa12.08□□□□□ -0.48
PDE4D-203ENST00000340635 MBD1Q9UIS9 605 aaPredicted RBP12.08□□□□□ -0.48
PDE4D-203ENST00000340635 WIPI2Q9Y4P8 454 aa12.08□□□□□ -0.48
PDE4D-203ENST00000340635 C4AP0C0L4 1744 aa12.08□□□□□ -0.48
PDE4D-203ENST00000340635 C4BP0C0L5 1744 aa12.08□□□□□ -0.48
PDE4D-203ENST00000340635 ATXN7O15265 892 aaPredicted RBP12.08□□□□□ -0.48
PDE4D-203ENST00000340635 EFNB2P52799 333 aa12.08□□□□□ -0.48
PDE4D-203ENST00000340635 LSM6P62312 80 aaKnown RBP12.08□□□□□ -0.48
PDE4D-203ENST00000340635 SH2D5Q6ZV89 423 aa12.08□□□□□ -0.48
PDE4D-203ENST00000340635 EEF1AKMT3Q96AZ1 226 aa12.08□□□□□ -0.48
PDE4D-203ENST00000340635 DUX3Q96PT4 197 aa12.08□□□□□ -0.48
PDE4D-203ENST00000340635 TOPAZ1Q8N9V7 1692 aa12.07□□□□□ -0.48
PDE4D-203ENST00000340635 TGIF2-C20orf24A0A0A6YYL0 155 aa12.07□□□□□ -0.48
PDE4D-203ENST00000340635 TMEM249Q2WGJ8 235 aa12.07□□□□□ -0.48
PDE4D-203ENST00000340635 RPL8P62917 257 aaKnown RBP12.07□□□□□ -0.48
PDE4D-203ENST00000340635 OR2Y1Q8NGV0 311 aa12.07□□□□□ -0.48
PDE4D-203ENST00000340635 IGHV3-72A0A0B4J1Y9 119 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms