RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 GLDNQ6ZMI3 551 aaPredicted RBP12.14□□□□□ -0.47
VAPA-201ENST00000340541 SLC35E3Q7Z769 313 aa12.14□□□□□ -0.47
VAPA-201ENST00000340541 NDUFA11Q86Y39 141 aa12.14□□□□□ -0.47
VAPA-201ENST00000340541 H1FOOQ8IZA3 346 aaPredicted RBP12.14□□□□□ -0.47
VAPA-201ENST00000340541 OR5AN1Q8NGI8 311 aa12.14□□□□□ -0.47
VAPA-201ENST00000340541 OR10J5Q8NHC4 309 aa12.14□□□□□ -0.47
VAPA-201ENST00000340541 SLC25A46Q96AG3 418 aa12.14□□□□□ -0.47
VAPA-201ENST00000340541 HSPB9Q9BQS6 159 aa12.14□□□□□ -0.47
VAPA-201ENST00000340541 NAA50Q9GZZ1 169 aaKnown RBP12.14□□□□□ -0.47
VAPA-201ENST00000340541 DCSTAMPQ9H295 470 aa12.14□□□□□ -0.47
VAPA-201ENST00000340541 TRAV18A0A075B6X5 111 aa12.13□□□□□ -0.47
VAPA-201ENST00000340541 OR5H14A6NHG9 310 aa12.13□□□□□ -0.47
VAPA-201ENST00000340541 OR8U9P0C7N5 309 aa12.13□□□□□ -0.47
VAPA-201ENST00000340541 ALDH3B2P48448 385 aa12.13□□□□□ -0.47
VAPA-201ENST00000340541 LINC00205P59089 165 aa12.13□□□□□ -0.47
VAPA-201ENST00000340541 GNG2P59768 71 aa12.13□□□□□ -0.47
VAPA-201ENST00000340541 PITPNAQ00169 270 aa12.13□□□□□ -0.47
VAPA-201ENST00000340541 MMDQ15546 238 aa12.13□□□□□ -0.47
VAPA-201ENST00000340541 CTF1Q16619 201 aa12.13□□□□□ -0.47
VAPA-201ENST00000340541 ZNF383Q8NA42 475 aa12.13□□□□□ -0.47
VAPA-201ENST00000340541 DRAXINQ8NBI3 349 aaPredicted RBP12.13□□□□□ -0.47
VAPA-201ENST00000340541 NPBQ8NG41 125 aa12.13□□□□□ -0.47
VAPA-201ENST00000340541 OR4F17Q8NGA8 305 aa12.13□□□□□ -0.47
VAPA-201ENST00000340541 OR8U1Q8NH10 309 aa12.13□□□□□ -0.47
VAPA-201ENST00000340541 C5orf30Q96GV9 206 aa12.13□□□□□ -0.47
VAPA-201ENST00000340541 OR4F4Q96R69 305 aa12.13□□□□□ -0.47
VAPA-201ENST00000340541 ST6GALNAC5Q9BVH7 336 aa12.13□□□□□ -0.47
VAPA-201ENST00000340541 LINC00527Q9UJ94 153 aa12.13□□□□□ -0.47
VAPA-201ENST00000340541 GAB2Q9UQC2 676 aa12.13□□□□□ -0.47
VAPA-201ENST00000340541 PSMB11A5LHX3 300 aa12.12□□□□□ -0.47
VAPA-201ENST00000340541 GABARAPO95166 117 aa12.12□□□□□ -0.47
VAPA-201ENST00000340541 NDUFA3O95167 84 aa12.12□□□□□ -0.47
VAPA-201ENST00000340541 TFAP2AP05549 437 aa12.12□□□□□ -0.47
VAPA-201ENST00000340541 NSUN5P1Q3KNT7 163 aa12.12□□□□□ -0.47
VAPA-201ENST00000340541 ANKRD13BQ86YJ7 626 aa12.12□□□□□ -0.47
VAPA-201ENST00000340541 STPG2Q8N412 459 aa12.12□□□□□ -0.47
VAPA-201ENST00000340541 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.12□□□□□ -0.47
VAPA-201ENST00000340541 CHPT1Q8WUD6 406 aa12.12□□□□□ -0.47
VAPA-201ENST00000340541 PHF21AQ96BD5 680 aa12.12□□□□□ -0.47
VAPA-201ENST00000340541 RASL11BQ9BPW5 248 aa12.12□□□□□ -0.47
VAPA-201ENST00000340541 MRPS26Q9BYN8 205 aaKnown RBP12.12□□□□□ -0.47
VAPA-201ENST00000340541 AUNIPQ9H7T9 357 aa12.12□□□□□ -0.47
VAPA-201ENST00000340541 SDHAF2Q9NX18 166 aa12.12□□□□□ -0.47
VAPA-201ENST00000340541 ZNF221Q9UK13 617 aa12.12□□□□□ -0.47
VAPA-201ENST00000340541 NBR2O15453 112 aa12.11□□□□□ -0.47
VAPA-201ENST00000340541 PTHLHP12272 177 aa12.11□□□□□ -0.47
VAPA-201ENST00000340541 MC5RP33032 325 aa12.11□□□□□ -0.47
VAPA-201ENST00000340541 SOX6P35712 828 aa12.11□□□□□ -0.47
VAPA-201ENST00000340541 UBE2NLQ5JXB2 153 aa12.11□□□□□ -0.47
VAPA-201ENST00000340541 ZNF329Q86UD4 541 aa12.11□□□□□ -0.47
VAPA-201ENST00000340541 FOXRED2Q8IWF2 684 aa12.11□□□□□ -0.47
VAPA-201ENST00000340541 SAMD12Q8N8I0 201 aa12.11□□□□□ -0.47
VAPA-201ENST00000340541 KCTD12Q96CX2 325 aaKnown RBP12.11□□□□□ -0.47
VAPA-201ENST00000340541 GINS4Q9BRT9 223 aa12.11□□□□□ -0.47
VAPA-201ENST00000340541 OR2D2Q9H210 308 aa12.11□□□□□ -0.47
VAPA-201ENST00000340541 DIABLOQ9NR28 239 aa12.11□□□□□ -0.47
VAPA-201ENST00000340541 ZNF107Q9UII5 783 aaPredicted RBP12.11□□□□□ -0.47
VAPA-201ENST00000340541 WASHC3Q9Y3C0 194 aa12.11□□□□□ -0.47
VAPA-201ENST00000340541 M0R1X1 148 aa12.1□□□□□ -0.47
VAPA-201ENST00000340541 AP4M1O00189 453 aa12.1□□□□□ -0.47
VAPA-201ENST00000340541 XRCC3O43542 346 aa12.1□□□□□ -0.47
VAPA-201ENST00000340541 HLA-DRB1P01911 266 aa12.1□□□□□ -0.47
VAPA-201ENST00000340541 C5orf64Q2M2E5 130 aa12.1□□□□□ -0.47
VAPA-201ENST00000340541 CNIH2Q6PI25 160 aa12.1□□□□□ -0.47
VAPA-201ENST00000340541 GVQW1Q8N7I0 195 aa12.1□□□□□ -0.47
VAPA-201ENST00000340541 OR4X2Q8NGF9 303 aa12.1□□□□□ -0.47
VAPA-201ENST00000340541 NECAP2Q9NVZ3 263 aa12.1□□□□□ -0.47
VAPA-201ENST00000340541 ANXA10Q9UJ72 324 aa12.1□□□□□ -0.47
VAPA-201ENST00000340541 TCRBV4S1A1TA0A5B7 111 aa12.09□□□□□ -0.47
VAPA-201ENST00000340541 RBBP9O75884 186 aa12.09□□□□□ -0.47
VAPA-201ENST00000340541 IGKV1-16P04430 117 aa12.09□□□□□ -0.47
VAPA-201ENST00000340541 IGF1P05019 195 aa12.09□□□□□ -0.47
VAPA-201ENST00000340541 CTXN2P0C2S0 81 aa12.09□□□□□ -0.47
VAPA-201ENST00000340541 CFHR3Q02985 330 aa12.09□□□□□ -0.47
VAPA-201ENST00000340541 GPR107Q5VW38 600 aa12.09□□□□□ -0.47
VAPA-201ENST00000340541 HOGA1Q86XE5 327 aa12.09□□□□□ -0.47
VAPA-201ENST00000340541 WFDC9Q8NEX5 89 aa12.09□□□□□ -0.47
VAPA-201ENST00000340541 S100A16Q96FQ6 103 aaKnown RBP12.09□□□□□ -0.47
VAPA-201ENST00000340541 RNF5Q99942 180 aa12.09□□□□□ -0.47
VAPA-201ENST00000340541 ZNF580Q9UK33 172 aa12.09□□□□□ -0.47
VAPA-201ENST00000340541 TSSC4Q9Y5U2 329 aaPredicted RBP12.09□□□□□ -0.47
VAPA-201ENST00000340541 NOTCH3Q9UM47 2321 aa12.09□□□□□ -0.47
VAPA-201ENST00000340541 IGHV7-81A0A0B4J1V7 117 aa12.08□□□□□ -0.48
VAPA-201ENST00000340541 A0A1W2PRX2 142 aa12.08□□□□□ -0.48
VAPA-201ENST00000340541 H7C2Y5 167 aa12.08□□□□□ -0.48
VAPA-201ENST00000340541 RRHO14718 337 aa12.08□□□□□ -0.48
VAPA-201ENST00000340541 TUSC2O75896 110 aa12.08□□□□□ -0.48
VAPA-201ENST00000340541 EIF4EP06730 217 aaKnown RBP12.08□□□□□ -0.48
VAPA-201ENST00000340541 NFYAP23511 347 aaPredicted RBP12.08□□□□□ -0.48
VAPA-201ENST00000340541 OXLD1Q5BKU9 147 aa12.08□□□□□ -0.48
VAPA-201ENST00000340541 PDPNQ86YL7 162 aa12.08□□□□□ -0.48
VAPA-201ENST00000340541 BEST4Q8NFU0 473 aa12.08□□□□□ -0.48
VAPA-201ENST00000340541 R3HDM4Q96D70 268 aa12.08□□□□□ -0.48
VAPA-201ENST00000340541 FBXL15Q9H469 300 aa12.08□□□□□ -0.48
VAPA-201ENST00000340541 OR2W1Q9Y3N9 320 aa12.08□□□□□ -0.48
VAPA-201ENST00000340541 IGKV1D-13A0A0B4J2D9 117 aa12.07□□□□□ -0.48
VAPA-201ENST00000340541 IGLV2-14P01704 120 aa12.07□□□□□ -0.48
VAPA-201ENST00000340541 HLA-DQB1P01920 261 aa12.07□□□□□ -0.48
VAPA-201ENST00000340541 IGKV1-13P0DP09 117 aa12.07□□□□□ -0.48
VAPA-201ENST00000340541 TAS2R20P59543 309 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms