RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 Q6ZPA2 131 aa10.54□□□□□ -0.72
SIRPB3P-201ENST00000340424 TPRA1Q86W33 373 aa10.54□□□□□ -0.72
SIRPB3P-201ENST00000340424 LYSMD2Q8IV50 215 aa10.54□□□□□ -0.72
SIRPB3P-201ENST00000340424 STPG2Q8N412 459 aa10.54□□□□□ -0.72
SIRPB3P-201ENST00000340424 FAM71E2Q8N5Q1 922 aa10.54□□□□□ -0.72
SIRPB3P-201ENST00000340424 RAB3CQ96E17 227 aa10.54□□□□□ -0.72
SIRPB3P-201ENST00000340424 Q9N2K0 584 aa10.54□□□□□ -0.72
SIRPB3P-201ENST00000340424 ZFP57Q9NU63 452 aa10.54□□□□□ -0.72
SIRPB3P-201ENST00000340424 STUB1Q9UNE7 303 aa10.54□□□□□ -0.72
SIRPB3P-201ENST00000340424 A0A1W2PRX2 142 aa10.53□□□□□ -0.72
SIRPB3P-201ENST00000340424 ZNF736B4DX44 427 aaPredicted RBP10.53□□□□□ -0.72
SIRPB3P-201ENST00000340424 HSPA12AO43301 675 aa10.53□□□□□ -0.72
SIRPB3P-201ENST00000340424 PF4P02776 101 aa10.53□□□□□ -0.72
SIRPB3P-201ENST00000340424 CD3GP09693 182 aa10.53□□□□□ -0.72
SIRPB3P-201ENST00000340424 SOX6P35712 828 aa10.53□□□□□ -0.72
SIRPB3P-201ENST00000340424 KIR2DS1Q14954 304 aa10.53□□□□□ -0.72
SIRPB3P-201ENST00000340424 MMDQ15546 238 aa10.53□□□□□ -0.72
SIRPB3P-201ENST00000340424 KHDC1LQ5JSQ8 128 aa10.53□□□□□ -0.72
SIRPB3P-201ENST00000340424 PLAC9Q5JTB6 97 aa10.53□□□□□ -0.72
SIRPB3P-201ENST00000340424 HIST2H2BDQ6DRA6 164 aa10.53□□□□□ -0.72
SIRPB3P-201ENST00000340424 C22orf42Q6IC83 251 aa10.53□□□□□ -0.72
SIRPB3P-201ENST00000340424 TEX38Q6PEX7 206 aa10.53□□□□□ -0.72
SIRPB3P-201ENST00000340424 CADM3Q8N126 398 aa10.53□□□□□ -0.72
SIRPB3P-201ENST00000340424 WFDC9Q8NEX5 89 aa10.53□□□□□ -0.72
SIRPB3P-201ENST00000340424 PHF21AQ96BD5 680 aa10.53□□□□□ -0.72
SIRPB3P-201ENST00000340424 CYYR1Q96J86 154 aa10.53□□□□□ -0.72
SIRPB3P-201ENST00000340424 NABP2Q9BQ15 211 aa10.53□□□□□ -0.72
SIRPB3P-201ENST00000340424 CHCHD6Q9BRQ6 235 aa10.53□□□□□ -0.72
SIRPB3P-201ENST00000340424 CCDC32Q9BV29 185 aa10.53□□□□□ -0.72
SIRPB3P-201ENST00000340424 SSR3Q9UNL2 185 aa10.53□□□□□ -0.72
SIRPB3P-201ENST00000340424 PRKDCP78527 4128 aaKnown RBP10.53□□□□□ -0.72
SIRPB3P-201ENST00000340424 SHISA3A0PJX4 238 aa10.52□□□□□ -0.73
SIRPB3P-201ENST00000340424 OR5H14A6NHG9 310 aa10.52□□□□□ -0.73
SIRPB3P-201ENST00000340424 NOTOA8MTQ0 251 aa10.52□□□□□ -0.73
SIRPB3P-201ENST00000340424 TRDCB7Z8K6 153 aa10.52□□□□□ -0.73
SIRPB3P-201ENST00000340424 SCGNO76038 276 aa10.52□□□□□ -0.73
SIRPB3P-201ENST00000340424 DUS4LO95620 317 aaKnown RBP10.52□□□□□ -0.73
SIRPB3P-201ENST00000340424 IGF1P05019 195 aa10.52□□□□□ -0.73
SIRPB3P-201ENST00000340424 OR5H8P0DN80 308 aa10.52□□□□□ -0.73
SIRPB3P-201ENST00000340424 MC5RP33032 325 aa10.52□□□□□ -0.73
SIRPB3P-201ENST00000340424 CEACAM6P40199 344 aa10.52□□□□□ -0.73
SIRPB3P-201ENST00000340424 OR10A3P58181 314 aa10.52□□□□□ -0.73
SIRPB3P-201ENST00000340424 LSM3P62310 102 aaKnown RBP10.52□□□□□ -0.73
SIRPB3P-201ENST00000340424 RPL23AP62750 156 aaKnown RBP10.52□□□□□ -0.73
SIRPB3P-201ENST00000340424 PNLIPRP3Q17RR3 467 aa10.52□□□□□ -0.73
SIRPB3P-201ENST00000340424 BEAN1Q3B7T3 259 aa10.52□□□□□ -0.73
SIRPB3P-201ENST00000340424 REC114Q7Z4M0 266 aa10.52□□□□□ -0.73
SIRPB3P-201ENST00000340424 ZNF329Q86UD4 541 aa10.52□□□□□ -0.73
SIRPB3P-201ENST00000340424 CCDC190Q86UF4 302 aa10.52□□□□□ -0.73
SIRPB3P-201ENST00000340424 OR4A4PQ8NGN8 299 aa10.52□□□□□ -0.73
SIRPB3P-201ENST00000340424 OR10R2Q8NGX6 335 aa10.52□□□□□ -0.73
SIRPB3P-201ENST00000340424 NOL4LQ96MY1 436 aaPredicted RBP10.52□□□□□ -0.73
SIRPB3P-201ENST00000340424 ZNF251Q9BRH9 671 aa10.52□□□□□ -0.73
SIRPB3P-201ENST00000340424 AGMATQ9BSE5 352 aa10.52□□□□□ -0.73
SIRPB3P-201ENST00000340424 HDHD3Q9BSH5 251 aaPredicted RBP10.52□□□□□ -0.73
SIRPB3P-201ENST00000340424 MRPL20Q9BYC9 149 aaKnown RBP10.52□□□□□ -0.73
SIRPB3P-201ENST00000340424 TXNL4BQ9NX01 149 aaKnown RBP10.52□□□□□ -0.73
SIRPB3P-201ENST00000340424 PLXNB1O43157 2135 aa10.52□□□□□ -0.73
SIRPB3P-201ENST00000340424 G3V4G9 280 aa10.51□□□□□ -0.73
SIRPB3P-201ENST00000340424 MFNGO00587 321 aa10.51□□□□□ -0.73
SIRPB3P-201ENST00000340424 NBR2O15453 112 aa10.51□□□□□ -0.73
SIRPB3P-201ENST00000340424 ATP6V1G1O75348 118 aa10.51□□□□□ -0.73
SIRPB3P-201ENST00000340424 RBBP9O75884 186 aa10.51□□□□□ -0.73
SIRPB3P-201ENST00000340424 CD33P20138 364 aa10.51□□□□□ -0.73
SIRPB3P-201ENST00000340424 S100A5P33763 92 aa10.51□□□□□ -0.73
SIRPB3P-201ENST00000340424 OR3A3P47888 321 aa10.51□□□□□ -0.73
SIRPB3P-201ENST00000340424 F2RL1P55085 397 aa10.51□□□□□ -0.73
SIRPB3P-201ENST00000340424 ACTBP60709 375 aa10.51□□□□□ -0.73
SIRPB3P-201ENST00000340424 SRSF7Q16629 238 aaKnown RBP eCLIP10.51□□□□□ -0.73
SIRPB3P-201ENST00000340424 C10orf99Q6UWK7 81 aa10.51□□□□□ -0.73
SIRPB3P-201ENST00000340424 RNF5Q99942 180 aa10.51□□□□□ -0.73
SIRPB3P-201ENST00000340424 TOLLIPQ9H0E2 274 aa10.51□□□□□ -0.73
SIRPB3P-201ENST00000340424 KIAA1456Q9P272 454 aa10.51□□□□□ -0.73
SIRPB3P-201ENST00000340424 RAB27BO00194 218 aa10.5□□□□□ -0.73
SIRPB3P-201ENST00000340424 TMEM127O75204 238 aa10.5□□□□□ -0.73
SIRPB3P-201ENST00000340424 HLA-DRB1P01911 266 aa10.5□□□□□ -0.73
SIRPB3P-201ENST00000340424 ELANEP08246 267 aa10.5□□□□□ -0.73
SIRPB3P-201ENST00000340424 FCGR3AP08637 254 aa10.5□□□□□ -0.73
SIRPB3P-201ENST00000340424 SCTP09683 121 aa10.5□□□□□ -0.73
SIRPB3P-201ENST00000340424 HIST1H1DP16402 221 aaKnown RBP10.5□□□□□ -0.73
SIRPB3P-201ENST00000340424 VDAC1P21796 283 aa10.5□□□□□ -0.73
SIRPB3P-201ENST00000340424 SCAND1P57086 179 aa10.5□□□□□ -0.73
SIRPB3P-201ENST00000340424 TNP2Q05952 138 aa10.5□□□□□ -0.73
SIRPB3P-201ENST00000340424 FOXE3Q13461 319 aa10.5□□□□□ -0.73
SIRPB3P-201ENST00000340424 C5orf24Q7Z6I8 188 aa10.5□□□□□ -0.73
SIRPB3P-201ENST00000340424 C1QL4Q86Z23 238 aa10.5□□□□□ -0.73
SIRPB3P-201ENST00000340424 RNF152Q8N8N0 203 aa10.5□□□□□ -0.73
SIRPB3P-201ENST00000340424 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.5□□□□□ -0.73
SIRPB3P-201ENST00000340424 NPBQ8NG41 125 aa10.5□□□□□ -0.73
SIRPB3P-201ENST00000340424 RCC1LQ96I51 464 aaKnown RBP10.5□□□□□ -0.73
SIRPB3P-201ENST00000340424 KCTD7Q96MP8 289 aa10.5□□□□□ -0.73
SIRPB3P-201ENST00000340424 GPR61Q9BZJ8 451 aa10.5□□□□□ -0.73
SIRPB3P-201ENST00000340424 C11orf54Q9H0W9 315 aaPredicted RBP10.5□□□□□ -0.73
SIRPB3P-201ENST00000340424 OR51E2Q9H255 320 aa10.5□□□□□ -0.73
SIRPB3P-201ENST00000340424 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.5□□□□□ -0.73
SIRPB3P-201ENST00000340424 ZNF107Q9UII5 783 aaPredicted RBP10.5□□□□□ -0.73
SIRPB3P-201ENST00000340424 ZNF221Q9UK13 617 aa10.5□□□□□ -0.73
SIRPB3P-201ENST00000340424 KCNK7Q9Y2U2 307 aa10.5□□□□□ -0.73
SIRPB3P-201ENST00000340424 FABP7O15540 132 aa10.49□□□□□ -0.73
SIRPB3P-201ENST00000340424 NDUFA3O95167 84 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms