RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 TMEM56-RWDD3S4R434 201 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 A0A087X0M5 115 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 SAA2-SAA4A0A096LPE2 208 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 IGHV4-61A0A0C4DH41 118 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 A0A1B0GX30 115 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 LINC00473A8K010 186 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 M0R1X1 148 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 B3GALNT1O75752 331 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 CDS2O95674 445 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 RBP4P02753 201 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 SAA2P0DJI9 122 aaPredicted RBP12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 NKX2-5P52952 324 aaPredicted RBP12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 SRPXP78539 464 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 PRB3Q04118 309 aaPredicted RBP12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 CATR1Q13166 79 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 Q5BKY6 102 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 OR2B11Q5JQS5 317 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 GGNBP1Q5YKI7 109 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 ZNF66Q6ZN08 573 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 SELENOHQ8IZQ5 122 aaKnown RBP12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 ABHD12Q8N2K0 398 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 TCTEX1D2Q8WW35 142 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 OR10C1Q96KK4 312 aa12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 HSD17B10Q99714 261 aaKnown RBP12.06□□□□□ -0.48
CDK5RAP3-201ENST00000338399 MED13LQ71F56 2210 aa12.05□□□□□ -0.48
CDK5RAP3-201ENST00000338399 hCG_1809904A0A1W2PP81 198 aa12.05□□□□□ -0.48
CDK5RAP3-201ENST00000338399 A0A1W2PPE2 198 aa12.05□□□□□ -0.48
CDK5RAP3-201ENST00000338399 A0A1W2PR64 198 aa12.05□□□□□ -0.48
CDK5RAP3-201ENST00000338399 A0A1W2PRV1 198 aa12.05□□□□□ -0.48
CDK5RAP3-201ENST00000338399 J3QR06 171 aa12.05□□□□□ -0.48
CDK5RAP3-201ENST00000338399 IFNA21P01568 189 aa12.05□□□□□ -0.48
CDK5RAP3-201ENST00000338399 C1QBP02746 253 aa12.05□□□□□ -0.48
CDK5RAP3-201ENST00000338399 SERPINE2P07093 398 aa12.05□□□□□ -0.48
CDK5RAP3-201ENST00000338399 DNASE1P24855 282 aa12.05□□□□□ -0.48
CDK5RAP3-201ENST00000338399 DUTP33316 252 aaKnown RBP12.05□□□□□ -0.48
CDK5RAP3-201ENST00000338399 DSCR9P59020 149 aa12.05□□□□□ -0.48
CDK5RAP3-201ENST00000338399 CLEC12BQ2HXU8 276 aa12.05□□□□□ -0.48
CDK5RAP3-201ENST00000338399 Q8N7P7 452 aa12.05□□□□□ -0.48
CDK5RAP3-201ENST00000338399 SLC35G3Q8N808 338 aa12.05□□□□□ -0.48
CDK5RAP3-201ENST00000338399 ZNF251Q9BRH9 671 aa12.05□□□□□ -0.48
CDK5RAP3-201ENST00000338399 A8MXK9 166 aa12.04□□□□□ -0.48
CDK5RAP3-201ENST00000338399 SRSF4Q08170 494 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-201ENST00000338399 ZNF585BQ52M93 769 aa12.04□□□□□ -0.48
CDK5RAP3-201ENST00000338399 NCR3LG1Q68D85 454 aa12.04□□□□□ -0.48
CDK5RAP3-201ENST00000338399 NOXA1Q86UR1 476 aa12.04□□□□□ -0.48
CDK5RAP3-201ENST00000338399 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.04□□□□□ -0.48
CDK5RAP3-201ENST00000338399 OR9G1Q8NH87 305 aa12.04□□□□□ -0.48
CDK5RAP3-201ENST00000338399 ZNF596Q8TC21 504 aa12.04□□□□□ -0.48
CDK5RAP3-201ENST00000338399 BEX4Q9NWD9 120 aaPredicted RBP12.04□□□□□ -0.48
CDK5RAP3-201ENST00000338399 PTPN13Q12923 2485 aa12.04□□□□□ -0.48
CDK5RAP3-201ENST00000338399 CSMD2Q7Z408 3487 aa12.04□□□□□ -0.48
CDK5RAP3-201ENST00000338399 FAM157AC9JC47 383 aa12.04□□□□□ -0.48
CDK5RAP3-201ENST00000338399 G3V3Q6 166 aa12.04□□□□□ -0.48
CDK5RAP3-201ENST00000338399 M0R1W7 72 aa12.04□□□□□ -0.48
CDK5RAP3-201ENST00000338399 ENSAO43768 121 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-201ENST00000338399 BRWD1-AS2P59051 145 aa12.04□□□□□ -0.48
CDK5RAP3-201ENST00000338399 PAX2Q02962 417 aa12.04□□□□□ -0.48
CDK5RAP3-201ENST00000338399 DEFB113Q30KQ7 82 aa12.04□□□□□ -0.48
CDK5RAP3-201ENST00000338399 SPAG16Q8N0X2 631 aa12.04□□□□□ -0.48
CDK5RAP3-201ENST00000338399 LINC00311Q8N616 119 aa12.04□□□□□ -0.48
CDK5RAP3-201ENST00000338399 C8orf31Q8N9H6 132 aa12.04□□□□□ -0.48
CDK5RAP3-201ENST00000338399 OR10X1Q8NGY0 326 aa12.04□□□□□ -0.48
CDK5RAP3-201ENST00000338399 RBPMSQ93062 196 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-201ENST00000338399 SIRT7Q9NRC8 400 aa12.04□□□□□ -0.48
CDK5RAP3-201ENST00000338399 MMP26Q9NRE1 261 aa12.04□□□□□ -0.48
CDK5RAP3-201ENST00000338399 VPS13CQ709C8 3753 aa12.03□□□□□ -0.48
CDK5RAP3-201ENST00000338399 NBPF19A0A087WUL8 3843 aa12.03□□□□□ -0.48
CDK5RAP3-201ENST00000338399 IGHV2-26A0A0B4J1V2 119 aa12.03□□□□□ -0.48
CDK5RAP3-201ENST00000338399 TOR1AO14656 332 aa12.03□□□□□ -0.48
CDK5RAP3-201ENST00000338399 RAMP3O60896 148 aa12.03□□□□□ -0.48
CDK5RAP3-201ENST00000338399 FOXH1O75593 365 aa12.03□□□□□ -0.48
CDK5RAP3-201ENST00000338399 IGKV1-39P01597 117 aa12.03□□□□□ -0.48
CDK5RAP3-201ENST00000338399 IGKV1D-39P04432 117 aa12.03□□□□□ -0.48
CDK5RAP3-201ENST00000338399 S100A1P23297 94 aa12.03□□□□□ -0.48
CDK5RAP3-201ENST00000338399 COX7A1P24310 79 aa12.03□□□□□ -0.48
CDK5RAP3-201ENST00000338399 LPAR6P43657 344 aa12.03□□□□□ -0.48
CDK5RAP3-201ENST00000338399 ZNF816Q0VGE8 651 aaPredicted RBP12.03□□□□□ -0.48
CDK5RAP3-201ENST00000338399 ASB13Q8WXK3 278 aa12.03□□□□□ -0.48
CDK5RAP3-201ENST00000338399 IL22RA2Q969J5 263 aa12.03□□□□□ -0.48
CDK5RAP3-201ENST00000338399 S1PR3Q99500 378 aa12.03□□□□□ -0.48
CDK5RAP3-201ENST00000338399 RANBP3Q9H6Z4 567 aaPredicted RBP12.03□□□□□ -0.48
CDK5RAP3-201ENST00000338399 LPAR2Q9HBW0 351 aa12.03□□□□□ -0.48
CDK5RAP3-201ENST00000338399 TMED3Q9Y3Q3 217 aa12.03□□□□□ -0.48
CDK5RAP3-201ENST00000338399 ANKRD17O75179 2603 aaKnown RBP12.03□□□□□ -0.48
CDK5RAP3-201ENST00000338399 CENPEQ02224 2701 aa12.02□□□□□ -0.48
CDK5RAP3-201ENST00000338399 IGHV2-70DA0A0C4DH43 119 aa12.02□□□□□ -0.48
CDK5RAP3-201ENST00000338399 GZMKP49863 264 aa12.02□□□□□ -0.48
CDK5RAP3-201ENST00000338399 IAH1Q2TAA2 248 aaPredicted RBP12.02□□□□□ -0.48
CDK5RAP3-201ENST00000338399 OR11H4Q8NGC9 324 aa12.02□□□□□ -0.48
CDK5RAP3-201ENST00000338399 C2orf50Q96LR7 162 aa12.02□□□□□ -0.48
CDK5RAP3-201ENST00000338399 CLEC7AQ9BXN2 247 aa12.02□□□□□ -0.48
CDK5RAP3-201ENST00000338399 NMES1Q9C002 83 aa12.02□□□□□ -0.48
CDK5RAP3-201ENST00000338399 GSKIPQ9P0R6 139 aa12.02□□□□□ -0.48
CDK5RAP3-201ENST00000338399 WNK2Q9Y3S1 2297 aa12.02□□□□□ -0.49
CDK5RAP3-201ENST00000338399 ASH1LQ9NR48 2969 aaKnown RBP12.02□□□□□ -0.49
CDK5RAP3-201ENST00000338399 FCGR3BO75015 233 aa12.02□□□□□ -0.49
CDK5RAP3-201ENST00000338399 PRRX1P54821 245 aa12.02□□□□□ -0.49
CDK5RAP3-201ENST00000338399 CYCSP99999 105 aaKnown RBP12.02□□□□□ -0.49
CDK5RAP3-201ENST00000338399 LRRC37A5PQ49AS3 106 aa12.02□□□□□ -0.49
CDK5RAP3-201ENST00000338399 ZNF833PQ6ZTB9 187 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms