RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 RAB13P51153 203 aa12.37□□□□□ -0.43
SEC13-201ENST00000337354 RPL15P61313 204 aaKnown RBP12.37□□□□□ -0.43
SEC13-201ENST00000337354 TSPAN5P62079 268 aa12.37□□□□□ -0.43
SEC13-201ENST00000337354 UBA52P62987 128 aaKnown RBP12.37□□□□□ -0.43
SEC13-201ENST00000337354 MSMO1Q15800 293 aa12.37□□□□□ -0.43
SEC13-201ENST00000337354 ZNF660Q6AZW8 331 aaPredicted RBP12.37□□□□□ -0.43
SEC13-201ENST00000337354 MOB3BQ86TA1 216 aa12.37□□□□□ -0.43
SEC13-201ENST00000337354 ARRDC1Q8N5I2 433 aa12.37□□□□□ -0.43
SEC13-201ENST00000337354 DEDD2Q8WXF8 326 aa12.37□□□□□ -0.43
SEC13-201ENST00000337354 BORCS5Q969J3 196 aa12.37□□□□□ -0.43
SEC13-201ENST00000337354 OR2D2Q9H210 308 aa12.37□□□□□ -0.43
SEC13-201ENST00000337354 VPREB3Q9UKI3 123 aa12.37□□□□□ -0.43
SEC13-201ENST00000337354 PROP1O75360 226 aa12.36□□□□□ -0.43
SEC13-201ENST00000337354 AADACP22760 399 aa12.36□□□□□ -0.43
SEC13-201ENST00000337354 MC5RP33032 325 aa12.36□□□□□ -0.43
SEC13-201ENST00000337354 AP3S2P59780 193 aa12.36□□□□□ -0.43
SEC13-201ENST00000337354 MEF2DQ14814 521 aa12.36□□□□□ -0.43
SEC13-201ENST00000337354 STEAP1BQ6NZ63 245 aa12.36□□□□□ -0.43
SEC13-201ENST00000337354 DRAM1Q8N682 238 aa12.36□□□□□ -0.43
SEC13-201ENST00000337354 ZNF645Q8N7E2 425 aa12.36□□□□□ -0.43
SEC13-201ENST00000337354 ZBTB34Q8NCN2 500 aa12.36□□□□□ -0.43
SEC13-201ENST00000337354 S100ZQ8WXG8 99 aa12.36□□□□□ -0.43
SEC13-201ENST00000337354 CFHR4Q92496 578 aa12.36□□□□□ -0.43
SEC13-201ENST00000337354 ZNF2Q9BSG1 426 aaPredicted RBP12.36□□□□□ -0.43
SEC13-201ENST00000337354 SRRQ9GZT4 340 aa12.36□□□□□ -0.43
SEC13-201ENST00000337354 RAB18Q9NP72 206 aa12.36□□□□□ -0.43
SEC13-201ENST00000337354 SDHAF2Q9NX18 166 aa12.36□□□□□ -0.43
SEC13-201ENST00000337354 TCF19Q9Y242 345 aa12.36□□□□□ -0.43
SEC13-201ENST00000337354 ANKRD20A5PA0PJZ0 165 aa12.35□□□□□ -0.43
SEC13-201ENST00000337354 RAB3DO95716 219 aa12.35□□□□□ -0.43
SEC13-201ENST00000337354 HERV-K104P61576 105 aa12.35□□□□□ -0.43
SEC13-201ENST00000337354 TAGLNQ01995 201 aaKnown RBP12.35□□□□□ -0.43
SEC13-201ENST00000337354 EBI3Q14213 229 aa12.35□□□□□ -0.43
SEC13-201ENST00000337354 RPL39P5Q59GN2 51 aa12.35□□□□□ -0.43
SEC13-201ENST00000337354 LPCAT3Q6P1A2 487 aa12.35□□□□□ -0.43
SEC13-201ENST00000337354 OR56B4Q8NH76 319 aa12.35□□□□□ -0.43
SEC13-201ENST00000337354 CAPSLQ8WWF8 208 aa12.35□□□□□ -0.43
SEC13-201ENST00000337354 AKR1E2Q96JD6 320 aa12.35□□□□□ -0.43
SEC13-201ENST00000337354 NABP2Q9BQ15 211 aa12.35□□□□□ -0.43
SEC13-201ENST00000337354 CHIAQ9BZP6 476 aa12.35□□□□□ -0.43
SEC13-201ENST00000337354 CUBNO60494 3623 aa12.34□□□□□ -0.43
SEC13-201ENST00000337354 A6NDX4 124 aa12.34□□□□□ -0.43
SEC13-201ENST00000337354 J3QRK9 145 aa12.34□□□□□ -0.43
SEC13-201ENST00000337354 AKAIN1P0CW23 69 aa12.34□□□□□ -0.43
SEC13-201ENST00000337354 CT45A6P0DMU7 189 aa12.34□□□□□ -0.43
SEC13-201ENST00000337354 CT45A5P0DMU8 189 aa12.34□□□□□ -0.43
SEC13-201ENST00000337354 CT45A7P0DMV0 189 aa12.34□□□□□ -0.43
SEC13-201ENST00000337354 C16orf82Q7Z2V1 217 aa12.34□□□□□ -0.43
SEC13-201ENST00000337354 OR5AN1Q8NGI8 311 aa12.34□□□□□ -0.43
SEC13-201ENST00000337354 TMEM158Q8WZ71 300 aa12.34□□□□□ -0.43
SEC13-201ENST00000337354 MOB3AQ96BX8 217 aa12.34□□□□□ -0.43
SEC13-201ENST00000337354 DUX5Q96PT3 197 aa12.34□□□□□ -0.43
SEC13-201ENST00000337354 MDFIQ99750 246 aa12.34□□□□□ -0.43
SEC13-201ENST00000337354 TINAGL1Q9GZM7 467 aaPredicted RBP12.34□□□□□ -0.43
SEC13-201ENST00000337354 TNFRSF19Q9NS68 423 aa12.34□□□□□ -0.43
SEC13-201ENST00000337354 MXRA5Q9NR99 2828 aa12.33□□□□□ -0.44
SEC13-201ENST00000337354 IGKV1D-13A0A0B4J2D9 117 aa12.33□□□□□ -0.44
SEC13-201ENST00000337354 OR5H14A6NHG9 310 aa12.33□□□□□ -0.44
SEC13-201ENST00000337354 M0QYG6 137 aa12.33□□□□□ -0.44
SEC13-201ENST00000337354 M0R1X1 148 aa12.33□□□□□ -0.44
SEC13-201ENST00000337354 SNRNP70P08621 437 aaKnown RBP12.33□□□□□ -0.44
SEC13-201ENST00000337354 IGKV1-13P0DP09 117 aa12.33□□□□□ -0.44
SEC13-201ENST00000337354 UCP3P55916 312 aa12.33□□□□□ -0.44
SEC13-201ENST00000337354 LSAMPQ13449 338 aa12.33□□□□□ -0.44
SEC13-201ENST00000337354 TOMM5Q8N4H5 51 aa12.33□□□□□ -0.44
SEC13-201ENST00000337354 OR2T10Q8NGZ9 312 aa12.33□□□□□ -0.44
SEC13-201ENST00000337354 TRIM63Q969Q1 353 aa12.33□□□□□ -0.44
SEC13-201ENST00000337354 ADTRPQ96IZ2 230 aa12.33□□□□□ -0.44
SEC13-201ENST00000337354 MRPL20Q9BYC9 149 aaKnown RBP12.33□□□□□ -0.44
SEC13-201ENST00000337354 SLC5A7Q9GZV3 580 aa12.33□□□□□ -0.44
SEC13-201ENST00000337354 AKIP1Q9NQ31 210 aa12.33□□□□□ -0.44
SEC13-201ENST00000337354 DISC1C4P0D8 188 aa12.32□□□□□ -0.44
SEC13-201ENST00000337354 GPR137BO60478 399 aa12.32□□□□□ -0.44
SEC13-201ENST00000337354 MOSP00540 346 aa12.32□□□□□ -0.44
SEC13-201ENST00000337354 IGKV1D-33P01593 117 aa12.32□□□□□ -0.44
SEC13-201ENST00000337354 IGKV1-33P01594 117 aa12.32□□□□□ -0.44
SEC13-201ENST00000337354 IGLV2-14P01704 120 aa12.32□□□□□ -0.44
SEC13-201ENST00000337354 CRYBA1P05813 215 aa12.32□□□□□ -0.44
SEC13-201ENST00000337354 CD24P25063 80 aa12.32□□□□□ -0.44
SEC13-201ENST00000337354 FAUP35544 74 aaKnown RBP12.32□□□□□ -0.44
SEC13-201ENST00000337354 THBS3P49746 956 aa12.32□□□□□ -0.44
SEC13-201ENST00000337354 FXYD4P59646 89 aa12.32□□□□□ -0.44
SEC13-201ENST00000337354 HES1Q14469 280 aa12.32□□□□□ -0.44
SEC13-201ENST00000337354 LY6EQ16553 131 aa12.32□□□□□ -0.44
SEC13-201ENST00000337354 KRTAP24-1Q3LI83 254 aa12.32□□□□□ -0.44
SEC13-201ENST00000337354 CCBE1Q6UXH8 406 aaPredicted RBP12.32□□□□□ -0.44
SEC13-201ENST00000337354 ZNF66Q6ZN08 573 aa12.32□□□□□ -0.44
SEC13-201ENST00000337354 MFSD4AQ8N468 514 aa12.32□□□□□ -0.44
SEC13-201ENST00000337354 OR8H1Q8NGG4 311 aa12.32□□□□□ -0.44
SEC13-201ENST00000337354 TERB2Q8NHR7 220 aa12.32□□□□□ -0.44
SEC13-201ENST00000337354 SECTM1Q8WVN6 248 aa12.32□□□□□ -0.44
SEC13-201ENST00000337354 RBM14Q96PK6 669 aaKnown RBP12.32□□□□□ -0.44
SEC13-201ENST00000337354 HSD17B10Q99714 261 aaKnown RBP12.32□□□□□ -0.44
SEC13-201ENST00000337354 CCL28Q9NRJ3 127 aa12.32□□□□□ -0.44
SEC13-201ENST00000337354 ATRQ13535 2644 aa12.32□□□□□ -0.44
SEC13-201ENST00000337354 IGHV3-72A0A0B4J1Y9 119 aa12.31□□□□□ -0.44
SEC13-201ENST00000337354 OR2F2O95006 317 aa12.31□□□□□ -0.44
SEC13-201ENST00000337354 GNRHRP30968 328 aa12.31□□□□□ -0.44
SEC13-201ENST00000337354 DUTP33316 252 aaKnown RBP12.31□□□□□ -0.44
SEC13-201ENST00000337354 ECI1P42126 302 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms