RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 CDKN1AP38936 164 aa15.45■□□□□ 0.06
PKP3-201ENST00000331563 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.45■□□□□ 0.06
PKP3-201ENST00000331563 ANKRD37Q7Z713 158 aa15.45■□□□□ 0.06
PKP3-201ENST00000331563 RPP25LQ8N5L8 163 aaKnown RBP15.45■□□□□ 0.06
PKP3-201ENST00000331563 OXGR1Q96P68 337 aa15.45■□□□□ 0.06
PKP3-201ENST00000331563 EML6Q6ZMW3 1958 aa15.45■□□□□ 0.06
PKP3-201ENST00000331563 LCN2P80188 198 aa15.45■□□□□ 0.06
PKP3-201ENST00000331563 OR8B8Q15620 311 aa15.45■□□□□ 0.06
PKP3-201ENST00000331563 LRRC75BQ2VPJ9 315 aa15.45■□□□□ 0.06
PKP3-201ENST00000331563 MORN2Q502X0 79 aa15.45■□□□□ 0.06
PKP3-201ENST00000331563 LHFPL4Q7Z7J7 247 aa15.45■□□□□ 0.06
PKP3-201ENST00000331563 ZNF709Q8N972 641 aa15.45■□□□□ 0.06
PKP3-201ENST00000331563 C10orf35Q96D05 121 aa15.45■□□□□ 0.06
PKP3-201ENST00000331563 WDYHV1Q96HA8 205 aa15.45■□□□□ 0.06
PKP3-201ENST00000331563 SAMD10Q9BYL1 202 aa15.45■□□□□ 0.06
PKP3-201ENST00000331563 SLC22A20A6NK97 555 aa15.44■□□□□ 0.06
PKP3-201ENST00000331563 NDUFS8O00217 210 aa15.44■□□□□ 0.06
PKP3-201ENST00000331563 CD46P15529 392 aa15.44■□□□□ 0.06
PKP3-201ENST00000331563 OR4B1Q8NGF8 309 aa15.44■□□□□ 0.06
PKP3-201ENST00000331563 OR1K1Q8NGR3 316 aa15.44■□□□□ 0.06
PKP3-201ENST00000331563 TNFRSF14Q92956 283 aa15.44■□□□□ 0.06
PKP3-201ENST00000331563 OR4C12Q96R67 309 aa15.44■□□□□ 0.06
PKP3-201ENST00000331563 CST9LQ9H4G1 147 aa15.44■□□□□ 0.06
PKP3-201ENST00000331563 ZDHHC11Q9H8X9 412 aa15.44■□□□□ 0.06
PKP3-201ENST00000331563 PAFAH1B2P68402 229 aa15.44■□□□□ 0.06
PKP3-201ENST00000331563 RSPO1Q2MKA7 263 aaPredicted RBP15.44■□□□□ 0.06
PKP3-201ENST00000331563 LHFPL2Q6ZUX7 228 aa15.44■□□□□ 0.06
PKP3-201ENST00000331563 TMEM105Q8N8V8 129 aa15.44■□□□□ 0.06
PKP3-201ENST00000331563 APH1AQ96BI3 265 aa15.44■□□□□ 0.06
PKP3-201ENST00000331563 UQCR10Q9UDW1 63 aa15.44■□□□□ 0.06
PKP3-201ENST00000331563 CACNG5Q9UF02 275 aa15.44■□□□□ 0.06
PKP3-201ENST00000331563 PXMP4Q9Y6I8 212 aa15.44■□□□□ 0.06
PKP3-201ENST00000331563 CD300LBA8K4G0 201 aa15.44■□□□□ 0.06
PKP3-201ENST00000331563 SYNGR2O43760 224 aa15.44■□□□□ 0.06
PKP3-201ENST00000331563 NRASP01111 189 aa15.44■□□□□ 0.06
PKP3-201ENST00000331563 CELA2AP08217 269 aa15.44■□□□□ 0.06
PKP3-201ENST00000331563 S100GP29377 79 aa15.44■□□□□ 0.06
PKP3-201ENST00000331563 OR10V1Q8NGI7 309 aa15.44■□□□□ 0.06
PKP3-201ENST00000331563 OR5D13Q8NGL4 314 aa15.44■□□□□ 0.06
PKP3-201ENST00000331563 TXN2Q99757 166 aa15.44■□□□□ 0.06
PKP3-201ENST00000331563 WDR61Q9GZS3 305 aaKnown RBP15.44■□□□□ 0.06
PKP3-201ENST00000331563 ZFHX4Q86UP3 3567 aa15.43■□□□□ 0.06
PKP3-201ENST00000331563 C1QTNF9BB2RNN3 333 aa15.43■□□□□ 0.06
PKP3-201ENST00000331563 PAGE4O60829 102 aa15.43■□□□□ 0.06
PKP3-201ENST00000331563 ADMP35318 185 aa15.43■□□□□ 0.06
PKP3-201ENST00000331563 RPL15P61313 204 aaKnown RBP15.43■□□□□ 0.06
PKP3-201ENST00000331563 Q6ZN92 141 aa15.43■□□□□ 0.06
PKP3-201ENST00000331563 ZNF295-AS1Q8N0V1 137 aa15.43■□□□□ 0.06
PKP3-201ENST00000331563 ZNF441Q8N8Z8 693 aa15.43■□□□□ 0.06
PKP3-201ENST00000331563 IGKV1D-33P01593 117 aa15.43■□□□□ 0.06
PKP3-201ENST00000331563 IGKV1-33P01594 117 aa15.43■□□□□ 0.06
PKP3-201ENST00000331563 HNRNPA3P51991 378 aaKnown RBP15.43■□□□□ 0.06
PKP3-201ENST00000331563 PMP22Q01453 160 aa15.43■□□□□ 0.06
PKP3-201ENST00000331563 TAF15Q92804 592 aaKnown RBP eCLIP15.43■□□□□ 0.06
PKP3-201ENST00000331563 H0Y980 276 aa15.42■□□□□ 0.06
PKP3-201ENST00000331563 PGLYRP1O75594 196 aaPredicted RBP15.42■□□□□ 0.06
PKP3-201ENST00000331563 EGR1P18146 543 aa15.42■□□□□ 0.06
PKP3-201ENST00000331563 BMP5P22003 454 aa15.42■□□□□ 0.06
PKP3-201ENST00000331563 NEIL1Q96FI4 390 aaPredicted RBP15.42■□□□□ 0.06
PKP3-201ENST00000331563 PSG2P11465 335 aa15.42■□□□□ 0.06
PKP3-201ENST00000331563 SUMO3P55854 103 aaPredicted RBP15.42■□□□□ 0.06
PKP3-201ENST00000331563 RBM11P57052 281 aaKnown RBP15.42■□□□□ 0.06
PKP3-201ENST00000331563 BAGE3Q86Y29 109 aa15.42■□□□□ 0.06
PKP3-201ENST00000331563 BAGE2Q86Y30 109 aa15.42■□□□□ 0.06
PKP3-201ENST00000331563 OR5AU1Q8NGC0 362 aa15.42■□□□□ 0.06
PKP3-201ENST00000331563 SGMS2Q8NHU3 365 aa15.42■□□□□ 0.06
PKP3-201ENST00000331563 TNRC6BQ9UPQ9 1833 aaKnown RBP15.42■□□□□ 0.06
PKP3-201ENST00000331563 TRAV30A0A087WSZ9 112 aa15.41■□□□□ 0.06
PKP3-201ENST00000331563 PLCXD3Q63HM9 321 aa15.41■□□□□ 0.06
PKP3-201ENST00000331563 PIGCQ92535 297 aa15.41■□□□□ 0.06
PKP3-201ENST00000331563 FAM103A1Q9BTL3 118 aaKnown RBP15.41■□□□□ 0.06
PKP3-201ENST00000331563 COMPP49747 757 aaPredicted RBP15.41■□□□□ 0.06
PKP3-201ENST00000331563 KRTDAPP60985 99 aa15.41■□□□□ 0.06
PKP3-201ENST00000331563 Q6ZRM9 215 aa15.41■□□□□ 0.06
PKP3-201ENST00000331563 NFAM1Q8NET5 270 aaPredicted RBP15.41■□□□□ 0.06
PKP3-201ENST00000331563 METTL7AQ9H8H3 244 aa15.41■□□□□ 0.06
PKP3-201ENST00000331563 ZNF16P17020 682 aaPredicted RBP15.4■□□□□ 0.06
PKP3-201ENST00000331563 F2RP25116 425 aa15.4■□□□□ 0.06
PKP3-201ENST00000331563 CTRLP40313 264 aa15.4■□□□□ 0.06
PKP3-201ENST00000331563 HIST3H3Q16695 136 aa15.4■□□□□ 0.06
PKP3-201ENST00000331563 PLPPR5Q32ZL2 321 aa15.4■□□□□ 0.06
PKP3-201ENST00000331563 ACSF3Q4G176 576 aaPredicted RBP15.4■□□□□ 0.06
PKP3-201ENST00000331563 PHYHD1Q5SRE7 291 aa15.4■□□□□ 0.06
PKP3-201ENST00000331563 HAPLN4Q86UW8 402 aa15.4■□□□□ 0.06
PKP3-201ENST00000331563 LOXL4Q96JB6 756 aa15.4■□□□□ 0.06
PKP3-201ENST00000331563 BTF3L4Q96K17 158 aa15.4■□□□□ 0.06
PKP3-201ENST00000331563 CNOT1A5YKK6 2376 aaKnown RBP15.4■□□□□ 0.06
PKP3-201ENST00000331563 WDR1O75083 606 aa15.4■□□□□ 0.06
PKP3-201ENST00000331563 MMP23AO75900 390 aa15.4■□□□□ 0.06
PKP3-201ENST00000331563 SERF1AO75920 110 aa15.4■□□□□ 0.06
PKP3-201ENST00000331563 VENTXO95231 258 aa15.4■□□□□ 0.06
PKP3-201ENST00000331563 CRYAAP02489 173 aa15.4■□□□□ 0.06
PKP3-201ENST00000331563 MPLP40238 635 aa15.4■□□□□ 0.06
PKP3-201ENST00000331563 SLC38A11Q08AI6 406 aa15.4■□□□□ 0.06
PKP3-201ENST00000331563 MSMO1Q15800 293 aa15.4■□□□□ 0.06
PKP3-201ENST00000331563 SPATA45Q537H7 98 aa15.4■□□□□ 0.06
PKP3-201ENST00000331563 OR10G9Q8NGN4 311 aa15.4■□□□□ 0.06
PKP3-201ENST00000331563 OR10G7Q8NGN6 311 aa15.4■□□□□ 0.06
PKP3-201ENST00000331563 SMIM12Q96EX1 92 aa15.4■□□□□ 0.06
PKP3-201ENST00000331563 HYPMO75409 117 aa15.39■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms