RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 ZNF581Q9P0T4 197 aa11.26□□□□□ -0.61
CTHRC1-201ENST00000330295 GNG12Q9UBI6 72 aa11.26□□□□□ -0.61
CTHRC1-201ENST00000330295 SSR3Q9UNL2 185 aa11.26□□□□□ -0.61
CTHRC1-201ENST00000330295 TRAV39A0A0B4J263 110 aa11.25□□□□□ -0.61
CTHRC1-201ENST00000330295 TMEM14DPA8MWL7 114 aa11.25□□□□□ -0.61
CTHRC1-201ENST00000330295 GDNFP39905 211 aa11.25□□□□□ -0.61
CTHRC1-201ENST00000330295 MRPS15P82914 257 aaKnown RBP11.25□□□□□ -0.61
CTHRC1-201ENST00000330295 Q3ZCU0 254 aa11.25□□□□□ -0.61
CTHRC1-201ENST00000330295 OR10K2Q6IF99 312 aa11.25□□□□□ -0.61
CTHRC1-201ENST00000330295 CD200R1LQ6Q8B3 271 aa11.25□□□□□ -0.61
CTHRC1-201ENST00000330295 Q8N9W7 124 aa11.25□□□□□ -0.61
CTHRC1-201ENST00000330295 OR4K15Q8NH41 348 aa11.25□□□□□ -0.61
CTHRC1-201ENST00000330295 FAM3DQ96BQ1 224 aa11.25□□□□□ -0.61
CTHRC1-201ENST00000330295 THAP7Q9BT49 309 aaPredicted RBP11.25□□□□□ -0.61
CTHRC1-201ENST00000330295 ELOVL1Q9BW60 279 aa11.25□□□□□ -0.61
CTHRC1-201ENST00000330295 TM2D1Q9BX74 207 aa11.25□□□□□ -0.61
CTHRC1-201ENST00000330295 SIGLEC8Q9NYZ4 499 aa11.25□□□□□ -0.61
CTHRC1-201ENST00000330295 ABRACLQ9P1F3 81 aa11.25□□□□□ -0.61
CTHRC1-201ENST00000330295 STEAP1Q9UHE8 339 aa11.25□□□□□ -0.61
CTHRC1-201ENST00000330295 ZNF580Q9UK33 172 aa11.25□□□□□ -0.61
CTHRC1-201ENST00000330295 PSG11Q9UQ72 335 aa11.25□□□□□ -0.61
CTHRC1-201ENST00000330295 DMBT1Q9UGM3 2413 aaPredicted RBP11.24□□□□□ -0.61
CTHRC1-201ENST00000330295 SHISA3A0PJX4 238 aa11.24□□□□□ -0.61
CTHRC1-201ENST00000330295 RGS11O94810 467 aa11.24□□□□□ -0.61
CTHRC1-201ENST00000330295 IGF1P05019 195 aa11.24□□□□□ -0.61
CTHRC1-201ENST00000330295 RAB3BP20337 219 aa11.24□□□□□ -0.61
CTHRC1-201ENST00000330295 GNG10P50151 68 aa11.24□□□□□ -0.61
CTHRC1-201ENST00000330295 RAB7AP51149 207 aa11.24□□□□□ -0.61
CTHRC1-201ENST00000330295 C22orf42Q6IC83 251 aa11.24□□□□□ -0.61
CTHRC1-201ENST00000330295 PRR18Q8N4B5 295 aa11.24□□□□□ -0.61
CTHRC1-201ENST00000330295 C8orf31Q8N9H6 132 aa11.24□□□□□ -0.61
CTHRC1-201ENST00000330295 OR56B1Q8NGI3 324 aa11.24□□□□□ -0.61
CTHRC1-201ENST00000330295 HSPB9Q9BQS6 159 aa11.24□□□□□ -0.61
CTHRC1-201ENST00000330295 CHCHD6Q9BRQ6 235 aa11.24□□□□□ -0.61
CTHRC1-201ENST00000330295 GFOD1Q9NXC2 390 aa11.24□□□□□ -0.61
CTHRC1-201ENST00000330295 RAB22AQ9UL26 194 aa11.24□□□□□ -0.61
CTHRC1-201ENST00000330295 MGAT4AQ9UM21 535 aa11.24□□□□□ -0.61
CTHRC1-201ENST00000330295 DNAH17Q9UFH2 4485 aa11.24□□□□□ -0.61
CTHRC1-201ENST00000330295 IGHV4OR15-8A0A075B7B6 117 aa11.23□□□□□ -0.61
CTHRC1-201ENST00000330295 A0A087WW49 117 aa11.23□□□□□ -0.61
CTHRC1-201ENST00000330295 TNFAIP8O95379 198 aa11.23□□□□□ -0.61
CTHRC1-201ENST00000330295 CNIH1O95406 144 aa11.23□□□□□ -0.61
CTHRC1-201ENST00000330295 IGHV3-7P01780 117 aa11.23□□□□□ -0.61
CTHRC1-201ENST00000330295 FGF9P31371 208 aaPredicted RBP11.23□□□□□ -0.61
CTHRC1-201ENST00000330295 QRFPP83859 136 aa11.23□□□□□ -0.61
CTHRC1-201ENST00000330295 EWSR1Q01844 656 aaKnown RBP eCLIP11.23□□□□□ -0.61
CTHRC1-201ENST00000330295 UNC119Q13432 240 aa11.23□□□□□ -0.61
CTHRC1-201ENST00000330295 EBI3Q14213 229 aa11.23□□□□□ -0.61
CTHRC1-201ENST00000330295 C2orf76Q3KRA6 126 aa11.23□□□□□ -0.61
CTHRC1-201ENST00000330295 UTF1Q5T230 341 aa11.23□□□□□ -0.61
CTHRC1-201ENST00000330295 SIGIRRQ6IA17 410 aa11.23□□□□□ -0.61
CTHRC1-201ENST00000330295 MOB1BQ7L9L4 216 aa11.23□□□□□ -0.61
CTHRC1-201ENST00000330295 TPRA1Q86W33 373 aa11.23□□□□□ -0.61
CTHRC1-201ENST00000330295 OR8H3Q8N146 312 aa11.23□□□□□ -0.61
CTHRC1-201ENST00000330295 GAPTQ8N292 157 aa11.23□□□□□ -0.61
CTHRC1-201ENST00000330295 LEAP2Q969E1 77 aa11.23□□□□□ -0.61
CTHRC1-201ENST00000330295 GALMQ96C23 342 aa11.23□□□□□ -0.61
CTHRC1-201ENST00000330295 FAAP24Q9BTP7 215 aa11.23□□□□□ -0.61
CTHRC1-201ENST00000330295 TOLLIPQ9H0E2 274 aa11.23□□□□□ -0.61
CTHRC1-201ENST00000330295 PLEKHA3Q9HB20 300 aa11.23□□□□□ -0.61
CTHRC1-201ENST00000330295 TAF9BQ9HBM6 251 aa11.23□□□□□ -0.61
CTHRC1-201ENST00000330295 TPSG1Q9NRR2 321 aa11.23□□□□□ -0.61
CTHRC1-201ENST00000330295 UBR4Q5T4S7 5183 aa11.22□□□□□ -0.61
CTHRC1-201ENST00000330295 A0A087WXM4 84 aa11.22□□□□□ -0.61
CTHRC1-201ENST00000330295 METTL21EPA6NDL7 271 aa11.22□□□□□ -0.61
CTHRC1-201ENST00000330295 IFITM5A6NNB3 132 aa11.22□□□□□ -0.61
CTHRC1-201ENST00000330295 H0Y980 276 aa11.22□□□□□ -0.61
CTHRC1-201ENST00000330295 C15orf65H3BRN8 121 aa11.22□□□□□ -0.61
CTHRC1-201ENST00000330295 HBZP02008 142 aa11.22□□□□□ -0.61
CTHRC1-201ENST00000330295 GAPDHP04406 335 aaKnown RBP11.22□□□□□ -0.61
CTHRC1-201ENST00000330295 RCC1P18754 421 aaPredicted RBP11.22□□□□□ -0.61
CTHRC1-201ENST00000330295 GADD45AP24522 165 aa11.22□□□□□ -0.61
CTHRC1-201ENST00000330295 PPIFP30405 207 aaKnown RBP11.22□□□□□ -0.61
CTHRC1-201ENST00000330295 RAB9AP51151 201 aa11.22□□□□□ -0.61
CTHRC1-201ENST00000330295 DIAPH2-AS1Q14236 149 aa11.22□□□□□ -0.61
CTHRC1-201ENST00000330295 NEDD8Q15843 81 aa11.22□□□□□ -0.61
CTHRC1-201ENST00000330295 TIMM50Q3ZCQ8 353 aa11.22□□□□□ -0.61
CTHRC1-201ENST00000330295 HES5Q5TA89 166 aa11.22□□□□□ -0.61
CTHRC1-201ENST00000330295 STEAP3Q658P3 488 aa11.22□□□□□ -0.61
CTHRC1-201ENST00000330295 C6orf201Q7Z4U5 140 aa11.22□□□□□ -0.61
CTHRC1-201ENST00000330295 LINC00311Q8N616 119 aa11.22□□□□□ -0.61
CTHRC1-201ENST00000330295 SETD6Q8TBK2 473 aa11.22□□□□□ -0.61
CTHRC1-201ENST00000330295 EAF1Q96JC9 268 aaPredicted RBP11.22□□□□□ -0.61
CTHRC1-201ENST00000330295 GFI1Q99684 422 aa11.22□□□□□ -0.61
CTHRC1-201ENST00000330295 SULT4A1Q9BR01 284 aa11.22□□□□□ -0.61
CTHRC1-201ENST00000330295 LPAR5Q9H1C0 372 aa11.22□□□□□ -0.61
CTHRC1-201ENST00000330295 OR2S2Q9NQN1 319 aa11.22□□□□□ -0.61
CTHRC1-201ENST00000330295 MBNL3Q9NUK0 354 aaKnown RBP11.22□□□□□ -0.61
CTHRC1-201ENST00000330295 HSF4Q9ULV5 492 aa11.22□□□□□ -0.61
CTHRC1-201ENST00000330295 IGLV1-40P01703 118 aa11.21□□□□□ -0.61
CTHRC1-201ENST00000330295 CLDN12P56749 244 aa11.21□□□□□ -0.61
CTHRC1-201ENST00000330295 LCE2AQ5TA79 106 aaPredicted RBP11.21□□□□□ -0.61
CTHRC1-201ENST00000330295 FAM89BQ8N5H3 189 aa11.21□□□□□ -0.61
CTHRC1-201ENST00000330295 Q8N6K4 173 aa11.21□□□□□ -0.61
CTHRC1-201ENST00000330295 OR1L1Q8NH94 360 aa11.21□□□□□ -0.61
CTHRC1-201ENST00000330295 UBALD1Q8TB05 177 aa11.21□□□□□ -0.61
CTHRC1-201ENST00000330295 MRPL30Q8TCC3 161 aaKnown RBP11.21□□□□□ -0.61
CTHRC1-201ENST00000330295 RASL11BQ9BPW5 248 aa11.21□□□□□ -0.61
CTHRC1-201ENST00000330295 NICN1Q9BSH3 213 aa11.21□□□□□ -0.61
CTHRC1-201ENST00000330295 TXNL4BQ9NX01 149 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms