RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 ACOT6Q3I5F7 207 aaPredicted RBP12.1□□□□□ -0.47
CHRNA3-201ENST00000326828 OR1L1Q8NH94 360 aa12.1□□□□□ -0.47
CHRNA3-201ENST00000326828 DNASE2BQ8WZ79 361 aa12.1□□□□□ -0.47
CHRNA3-201ENST00000326828 NEIL1Q96FI4 390 aaPredicted RBP12.1□□□□□ -0.47
CHRNA3-201ENST00000326828 PSMG3Q9BT73 122 aaPredicted RBP12.1□□□□□ -0.47
CHRNA3-201ENST00000326828 ZDHHC11Q9H8X9 412 aa12.1□□□□□ -0.47
CHRNA3-201ENST00000326828 SERPINA7P05543 415 aa12.09□□□□□ -0.47
CHRNA3-201ENST00000326828 HOXA6P31267 233 aa12.09□□□□□ -0.47
CHRNA3-201ENST00000326828 OR3A1P47881 315 aa12.09□□□□□ -0.47
CHRNA3-201ENST00000326828 RAB4BP61018 213 aa12.09□□□□□ -0.47
CHRNA3-201ENST00000326828 C10orf142B7Z368 130 aa12.09□□□□□ -0.47
CHRNA3-201ENST00000326828 MRPL33O75394 65 aaKnown RBP12.09□□□□□ -0.47
CHRNA3-201ENST00000326828 CTXN2P0C2S0 81 aa12.09□□□□□ -0.47
CHRNA3-201ENST00000326828 IGFBP4P22692 258 aa12.09□□□□□ -0.47
CHRNA3-201ENST00000326828 PCBD1P61457 104 aa12.09□□□□□ -0.47
CHRNA3-201ENST00000326828 DLL3Q9NYJ7 618 aa12.09□□□□□ -0.47
CHRNA3-201ENST00000326828 ZNF503-AS2A6NEH8 195 aa12.09□□□□□ -0.47
CHRNA3-201ENST00000326828 GDF1P27539 372 aa12.09□□□□□ -0.47
CHRNA3-201ENST00000326828 OR5I1Q13606 314 aa12.09□□□□□ -0.47
CHRNA3-201ENST00000326828 DMRTA1Q5VZB9 504 aa12.09□□□□□ -0.47
CHRNA3-201ENST00000326828 DIRC2Q96SL1 478 aa12.09□□□□□ -0.47
CHRNA3-201ENST00000326828 FAM234AQ9H0X4 552 aa12.09□□□□□ -0.47
CHRNA3-201ENST00000326828 ICE1Q9Y2F5 2266 aa12.08□□□□□ -0.48
CHRNA3-201ENST00000326828 ZNF716A6NP11 495 aa12.08□□□□□ -0.48
CHRNA3-201ENST00000326828 CBR3O75828 277 aa12.08□□□□□ -0.48
CHRNA3-201ENST00000326828 FKBP2P26885 142 aaKnown RBP12.08□□□□□ -0.48
CHRNA3-201ENST00000326828 ADMP35318 185 aa12.08□□□□□ -0.48
CHRNA3-201ENST00000326828 CDKN1AP38936 164 aa12.08□□□□□ -0.48
CHRNA3-201ENST00000326828 KMT5CQ86Y97 462 aa12.08□□□□□ -0.48
CHRNA3-201ENST00000326828 TGIF2LYQ8IUE0 185 aa12.08□□□□□ -0.48
CHRNA3-201ENST00000326828 CMTM2Q8TAZ6 248 aa12.08□□□□□ -0.48
CHRNA3-201ENST00000326828 HSPB9Q9BQS6 159 aa12.08□□□□□ -0.48
CHRNA3-201ENST00000326828 PYGO2Q9BRQ0 406 aa12.08□□□□□ -0.48
CHRNA3-201ENST00000326828 SAMD10Q9BYL1 202 aa12.08□□□□□ -0.48
CHRNA3-201ENST00000326828 CTXND1A0A1B0GTU2 59 aa12.08□□□□□ -0.48
CHRNA3-201ENST00000326828 SLC17A3O00476 420 aa12.08□□□□□ -0.48
CHRNA3-201ENST00000326828 DKK1O94907 266 aa12.08□□□□□ -0.48
CHRNA3-201ENST00000326828 P04436 131 aa12.08□□□□□ -0.48
CHRNA3-201ENST00000326828 CCKARP32238 428 aa12.08□□□□□ -0.48
CHRNA3-201ENST00000326828 OTX2P32243 289 aa12.08□□□□□ -0.48
CHRNA3-201ENST00000326828 FAM58AQ8N1B3 248 aa12.08□□□□□ -0.48
CHRNA3-201ENST00000326828 IFI44Q8TCB0 444 aa12.08□□□□□ -0.48
CHRNA3-201ENST00000326828 TRAV34A0A0B4J273 112 aa12.07□□□□□ -0.48
CHRNA3-201ENST00000326828 IGHV3-13P01766 116 aa12.07□□□□□ -0.48
CHRNA3-201ENST00000326828 IGHV3-7P01780 117 aa12.07□□□□□ -0.48
CHRNA3-201ENST00000326828 FRMD6-AS1P0C7T7 363 aa12.07□□□□□ -0.48
CHRNA3-201ENST00000326828 CCL4P13236 92 aa12.07□□□□□ -0.48
CHRNA3-201ENST00000326828 SLC35B1P78383 322 aa12.07□□□□□ -0.48
CHRNA3-201ENST00000326828 CEACAM21Q3KPI0 293 aa12.07□□□□□ -0.48
CHRNA3-201ENST00000326828 DRAM1Q8N682 238 aa12.07□□□□□ -0.48
CHRNA3-201ENST00000326828 OR10P1Q8NGE3 313 aa12.07□□□□□ -0.48
CHRNA3-201ENST00000326828 RYDENQ9NUL5 291 aaKnown RBP12.07□□□□□ -0.48
CHRNA3-201ENST00000326828 RP1L1Q8IWN7 2480 aaPredicted RBP12.07□□□□□ -0.48
CHRNA3-201ENST00000326828 F2Z2F3 143 aa12.07□□□□□ -0.48
CHRNA3-201ENST00000326828 IGLV2-14P01704 120 aa12.07□□□□□ -0.48
CHRNA3-201ENST00000326828 RPLP1P05386 114 aaKnown RBP12.07□□□□□ -0.48
CHRNA3-201ENST00000326828 COX5AP20674 150 aa12.07□□□□□ -0.48
CHRNA3-201ENST00000326828 C1orf194Q5T5A4 169 aa12.07□□□□□ -0.48
CHRNA3-201ENST00000326828 CXorf67Q86X51 503 aaPredicted RBP12.07□□□□□ -0.48
CHRNA3-201ENST00000326828 CISD2Q8N5K1 135 aaKnown RBP12.07□□□□□ -0.48
CHRNA3-201ENST00000326828 A0A1B0GWJ7 208 aa12.07□□□□□ -0.48
CHRNA3-201ENST00000326828 DEFB108AA8MXU0 73 aa12.07□□□□□ -0.48
CHRNA3-201ENST00000326828 SLC25A6P12236 298 aa12.07□□□□□ -0.48
CHRNA3-201ENST00000326828 TNFSF10P50591 281 aa12.07□□□□□ -0.48
CHRNA3-201ENST00000326828 BAGE3Q86Y29 109 aa12.07□□□□□ -0.48
CHRNA3-201ENST00000326828 BAGE2Q86Y30 109 aa12.07□□□□□ -0.48
CHRNA3-201ENST00000326828 ZFHX4Q86UP3 3567 aa12.06□□□□□ -0.48
CHRNA3-201ENST00000326828 IGHV3-43A0A0B4J1X8 118 aa12.06□□□□□ -0.48
CHRNA3-201ENST00000326828 IGHV3-43DP0DP04 118 aa12.06□□□□□ -0.48
CHRNA3-201ENST00000326828 OR10J1P30954 320 aa12.06□□□□□ -0.48
CHRNA3-201ENST00000326828 KRTDAPP60985 99 aa12.06□□□□□ -0.48
CHRNA3-201ENST00000326828 GNB1P62873 340 aa12.06□□□□□ -0.48
CHRNA3-201ENST00000326828 ARSJQ5FYB0 599 aaPredicted RBP12.06□□□□□ -0.48
CHRNA3-201ENST00000326828 COA6Q5JTJ3 125 aaKnown RBP12.06□□□□□ -0.48
CHRNA3-201ENST00000326828 LINC01551Q86U37 167 aa12.06□□□□□ -0.48
CHRNA3-201ENST00000326828 TPRX1Q8N7U7 411 aa12.06□□□□□ -0.48
CHRNA3-201ENST00000326828 OR5A2Q8NGI9 324 aa12.06□□□□□ -0.48
CHRNA3-201ENST00000326828 OR2D2Q9H210 308 aa12.06□□□□□ -0.48
CHRNA3-201ENST00000326828 A0A1W2PPV4 95 aa12.06□□□□□ -0.48
CHRNA3-201ENST00000326828 GJE1A6NN92 205 aa12.06□□□□□ -0.48
CHRNA3-201ENST00000326828 TMEM250H0YL14 139 aa12.06□□□□□ -0.48
CHRNA3-201ENST00000326828 RBFOX2O43251 390 aaKnown RBP eCLIP12.06□□□□□ -0.48
CHRNA3-201ENST00000326828 CDC34P49427 236 aaPredicted RBP12.06□□□□□ -0.48
CHRNA3-201ENST00000326828 C3AR1Q16581 482 aa12.06□□□□□ -0.48
CHRNA3-201ENST00000326828 GGNQ86UU5 652 aa12.06□□□□□ -0.48
CHRNA3-201ENST00000326828 RFESDQ8TAC1 157 aa12.06□□□□□ -0.48
CHRNA3-201ENST00000326828 ANAPC16Q96DE5 110 aa12.06□□□□□ -0.48
CHRNA3-201ENST00000326828 REPIN1Q9BWE0 567 aaKnown RBP12.06□□□□□ -0.48
CHRNA3-201ENST00000326828 C1QTNF5Q9BXJ0 243 aa12.06□□□□□ -0.48
CHRNA3-201ENST00000326828 DCAF16Q9NXF7 216 aa12.06□□□□□ -0.48
CHRNA3-201ENST00000326828 GGCTO75223 188 aaKnown RBP12.05□□□□□ -0.48
CHRNA3-201ENST00000326828 S1PR2O95136 353 aa12.05□□□□□ -0.48
CHRNA3-201ENST00000326828 UMODP07911 640 aa12.05□□□□□ -0.48
CHRNA3-201ENST00000326828 PCP4P48539 62 aa12.05□□□□□ -0.48
CHRNA3-201ENST00000326828 NUFIP2Q7Z417 695 aaKnown RBP12.05□□□□□ -0.48
CHRNA3-201ENST00000326828 TUSC5Q8IXB3 177 aa12.05□□□□□ -0.48
CHRNA3-201ENST00000326828 SMRP1Q8NCR6 262 aa12.05□□□□□ -0.48
CHRNA3-201ENST00000326828 TUBG2Q9NRH3 451 aa12.05□□□□□ -0.48
CHRNA3-201ENST00000326828 LIN7CQ9NUP9 197 aaKnown RBP12.05□□□□□ -0.48
CHRNA3-201ENST00000326828 IGHV1-45A0A0A0MS14 117 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms