RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 LINC01356Q8N9X3 169 aa12.42□□□□□ -0.42
PRPF3-201ENST00000324862 OR4P4Q8NGL7 312 aa12.42□□□□□ -0.42
PRPF3-201ENST00000324862 OR10X1Q8NGY0 326 aa12.42□□□□□ -0.42
PRPF3-201ENST00000324862 GHITMQ9H3K2 345 aa12.42□□□□□ -0.42
PRPF3-201ENST00000324862 C7orf69Q9H7B7 122 aa12.42□□□□□ -0.42
PRPF3-201ENST00000324862 MPPED1O15442 326 aa12.41□□□□□ -0.42
PRPF3-201ENST00000324862 RBP4P02753 201 aa12.41□□□□□ -0.42
PRPF3-201ENST00000324862 ARG1P05089 322 aa12.41□□□□□ -0.42
PRPF3-201ENST00000324862 OR5AC1P0C628 307 aa12.41□□□□□ -0.42
PRPF3-201ENST00000324862 TMEM128Q5BJH2 165 aa12.41□□□□□ -0.42
PRPF3-201ENST00000324862 UXS1Q8NBZ7 420 aa12.41□□□□□ -0.42
PRPF3-201ENST00000324862 SOX21Q9Y651 276 aaPredicted RBP12.41□□□□□ -0.42
PRPF3-201ENST00000324862 C9orf170A2RU37 121 aa12.41□□□□□ -0.42
PRPF3-201ENST00000324862 CRYM-AS1A6NIL9 109 aa12.41□□□□□ -0.42
PRPF3-201ENST00000324862 M0R1X1 148 aa12.41□□□□□ -0.42
PRPF3-201ENST00000324862 TOR1AO14656 332 aa12.41□□□□□ -0.42
PRPF3-201ENST00000324862 ECI1P42126 302 aa12.41□□□□□ -0.42
PRPF3-201ENST00000324862 BRWD1-AS2P59051 145 aa12.41□□□□□ -0.42
PRPF3-201ENST00000324862 EIF4EBP1Q13541 118 aaPredicted RBP12.41□□□□□ -0.42
PRPF3-201ENST00000324862 KIR3DL3Q8N743 410 aa12.41□□□□□ -0.42
PRPF3-201ENST00000324862 C1orf159Q96HA4 380 aa12.41□□□□□ -0.42
PRPF3-201ENST00000324862 SCGB3A2Q96PL1 93 aa12.41□□□□□ -0.42
PRPF3-201ENST00000324862 CUBNO60494 3623 aa12.41□□□□□ -0.42
PRPF3-201ENST00000324862 DHODHQ02127 395 aa12.4□□□□□ -0.42
PRPF3-201ENST00000324862 C2orf68Q2NKX9 166 aa12.4□□□□□ -0.42
PRPF3-201ENST00000324862 HLA-DRB5Q30154 266 aa12.4□□□□□ -0.42
PRPF3-201ENST00000324862 ANKRD55Q3KP44 614 aa12.4□□□□□ -0.42
PRPF3-201ENST00000324862 RUSC1-AS1Q66K80 236 aa12.4□□□□□ -0.42
PRPF3-201ENST00000324862 CMTM1Q8IZ96 169 aa12.4□□□□□ -0.42
PRPF3-201ENST00000324862 RAB29O14966 203 aa12.4□□□□□ -0.42
PRPF3-201ENST00000324862 RAMP3O60896 148 aa12.4□□□□□ -0.42
PRPF3-201ENST00000324862 CD34P28906 385 aa12.4□□□□□ -0.42
PRPF3-201ENST00000324862 RAB7AP51149 207 aa12.4□□□□□ -0.42
PRPF3-201ENST00000324862 RAG2P55895 527 aa12.4□□□□□ -0.42
PRPF3-201ENST00000324862 TMEM30BQ3MIR4 351 aa12.4□□□□□ -0.42
PRPF3-201ENST00000324862 NCR3LG1Q68D85 454 aa12.4□□□□□ -0.42
PRPF3-201ENST00000324862 LPCAT3Q6P1A2 487 aa12.4□□□□□ -0.42
PRPF3-201ENST00000324862 C1orf122Q6ZSJ8 110 aa12.4□□□□□ -0.42
PRPF3-201ENST00000324862 ALX4Q9H161 411 aaPredicted RBP12.4□□□□□ -0.42
PRPF3-201ENST00000324862 NAA60Q9H7X0 242 aa12.4□□□□□ -0.42
PRPF3-201ENST00000324862 TRAV40A0A0B4J280 105 aa12.39□□□□□ -0.43
PRPF3-201ENST00000324862 C7orf66A4D0T2 115 aa12.39□□□□□ -0.43
PRPF3-201ENST00000324862 IGHV4-38-2P0DP08 117 aa12.39□□□□□ -0.43
PRPF3-201ENST00000324862 BRD3OSQ6XYD6 125 aa12.39□□□□□ -0.43
PRPF3-201ENST00000324862 LYG2Q86SG7 212 aa12.39□□□□□ -0.43
PRPF3-201ENST00000324862 SGPP2Q8IWX5 399 aa12.39□□□□□ -0.43
PRPF3-201ENST00000324862 OR13D1Q8NGV5 346 aa12.39□□□□□ -0.43
PRPF3-201ENST00000324862 LHFPL5Q8TAF8 219 aa12.39□□□□□ -0.43
PRPF3-201ENST00000324862 UNKLQ9H9P5 680 aaKnown RBP12.39□□□□□ -0.43
PRPF3-201ENST00000324862 AUP1Q9Y679 476 aa12.39□□□□□ -0.43
PRPF3-201ENST00000324862 CENPVL3A0A0U1RRI6 287 aa12.39□□□□□ -0.43
PRPF3-201ENST00000324862 C3orf85A0A1B0GTC6 90 aa12.39□□□□□ -0.43
PRPF3-201ENST00000324862 BUB1B-PAK6H3BSN5 160 aa12.39□□□□□ -0.43
PRPF3-201ENST00000324862 ITGB1BP1O14713 200 aa12.39□□□□□ -0.43
PRPF3-201ENST00000324862 DUTP33316 252 aaKnown RBP12.39□□□□□ -0.43
PRPF3-201ENST00000324862 LY6G6FQ5SQ64 297 aa12.39□□□□□ -0.43
PRPF3-201ENST00000324862 ZNF626Q68DY1 528 aa12.39□□□□□ -0.43
PRPF3-201ENST00000324862 DYNAPQ8N1N2 210 aa12.39□□□□□ -0.43
PRPF3-201ENST00000324862 PIP4P2Q8N4L2 257 aa12.39□□□□□ -0.43
PRPF3-201ENST00000324862 OR11H6Q8NGC7 330 aa12.39□□□□□ -0.43
PRPF3-201ENST00000324862 ZNF596Q8TC21 504 aa12.39□□□□□ -0.43
PRPF3-201ENST00000324862 GLYATL2Q8WU03 294 aa12.39□□□□□ -0.43
PRPF3-201ENST00000324862 ST6GALNAC6Q969X2 333 aa12.39□□□□□ -0.43
PRPF3-201ENST00000324862 ZNF486Q96H40 463 aaPredicted RBP12.39□□□□□ -0.43
PRPF3-201ENST00000324862 MRPL20Q9BYC9 149 aaKnown RBP12.39□□□□□ -0.43
PRPF3-201ENST00000324862 OR51J1Q9H342 316 aa12.39□□□□□ -0.43
PRPF3-201ENST00000324862 PIPOXQ9P0Z9 390 aa12.39□□□□□ -0.43
PRPF3-201ENST00000324862 HILPDAQ9Y5L2 63 aa12.39□□□□□ -0.43
PRPF3-201ENST00000324862 ANK3Q12955 4377 aaKnown RBP12.39□□□□□ -0.43
PRPF3-201ENST00000324862 IGHV3-72A0A0B4J1Y9 119 aa12.38□□□□□ -0.43
PRPF3-201ENST00000324862 SFT2D2O95562 160 aa12.38□□□□□ -0.43
PRPF3-201ENST00000324862 IL5P05113 134 aa12.38□□□□□ -0.43
PRPF3-201ENST00000324862 CT45A6P0DMU7 189 aa12.38□□□□□ -0.43
PRPF3-201ENST00000324862 CT45A5P0DMU8 189 aa12.38□□□□□ -0.43
PRPF3-201ENST00000324862 CT45A7P0DMV0 189 aa12.38□□□□□ -0.43
PRPF3-201ENST00000324862 F2RP25116 425 aa12.38□□□□□ -0.43
PRPF3-201ENST00000324862 KCTD9Q7L273 389 aa12.38□□□□□ -0.43
PRPF3-201ENST00000324862 LINC00311Q8N616 119 aa12.38□□□□□ -0.43
PRPF3-201ENST00000324862 ZNF383Q8NA42 475 aa12.38□□□□□ -0.43
PRPF3-201ENST00000324862 ZNF431Q8TF32 576 aaPredicted RBP12.38□□□□□ -0.43
PRPF3-201ENST00000324862 TCTEX1D2Q8WW35 142 aa12.38□□□□□ -0.43
PRPF3-201ENST00000324862 AKR1E2Q96JD6 320 aa12.38□□□□□ -0.43
PRPF3-201ENST00000324862 HEXA-AS1Q9H8Q6 139 aa12.38□□□□□ -0.43
PRPF3-201ENST00000324862 MXRA5Q9NR99 2828 aa12.38□□□□□ -0.43
PRPF3-201ENST00000324862 ODF3BA8MYP8 253 aa12.38□□□□□ -0.43
PRPF3-201ENST00000324862 RPA2P15927 270 aa12.38□□□□□ -0.43
PRPF3-201ENST00000324862 TAS2R31P59538 309 aa12.38□□□□□ -0.43
PRPF3-201ENST00000324862 WDR89Q96FK6 387 aaPredicted RBP12.38□□□□□ -0.43
PRPF3-201ENST00000324862 SMR3AQ99954 134 aa12.38□□□□□ -0.43
PRPF3-201ENST00000324862 SONP18583 2426 aaKnown RBP12.37□□□□□ -0.43
PRPF3-201ENST00000324862 TRAV20A0A0B4J274 112 aa12.37□□□□□ -0.43
PRPF3-201ENST00000324862 CCSO14618 274 aa12.37□□□□□ -0.43
PRPF3-201ENST00000324862 SSNA1O43805 119 aa12.37□□□□□ -0.43
PRPF3-201ENST00000324862 CREBL2O60519 120 aaPredicted RBP12.37□□□□□ -0.43
PRPF3-201ENST00000324862 CXCL3P19876 107 aa12.37□□□□□ -0.43
PRPF3-201ENST00000324862 PRRX1P54821 245 aa12.37□□□□□ -0.43
PRPF3-201ENST00000324862 RND3P61587 244 aa12.37□□□□□ -0.43
PRPF3-201ENST00000324862 CD300CQ08708 224 aa12.37□□□□□ -0.43
PRPF3-201ENST00000324862 ZNF833PQ6ZTB9 187 aa12.37□□□□□ -0.43
PRPF3-201ENST00000324862 CCDC71LQ8N9Z2 235 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms