RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 ZIC3O60481 467 aa8.18□□□□□ -1.1
PTPRA-202ENST00000318266 FGF12P61328 243 aa8.18□□□□□ -1.1
PTPRA-202ENST00000318266 TGFBR3Q03167 851 aa8.18□□□□□ -1.1
PTPRA-202ENST00000318266 ZNF324BQ6AW86 544 aaPredicted RBP8.18□□□□□ -1.1
PTPRA-202ENST00000318266 LINC01551Q86U37 167 aa8.18□□□□□ -1.1
PTPRA-202ENST00000318266 SAMD10Q9BYL1 202 aa8.18□□□□□ -1.1
PTPRA-202ENST00000318266 TMEM106BQ9NUM4 274 aa8.18□□□□□ -1.1
PTPRA-202ENST00000318266 COL5A1P20908 1838 aaPredicted RBP8.18□□□□□ -1.1
PTPRA-202ENST00000318266 TRAV34A0A0B4J273 112 aa8.17□□□□□ -1.1
PTPRA-202ENST00000318266 A0A1W2PR77 199 aa8.17□□□□□ -1.1
PTPRA-202ENST00000318266 SIRPB1O00241 398 aa8.17□□□□□ -1.1
PTPRA-202ENST00000318266 SPINK4O60575 86 aa8.17□□□□□ -1.1
PTPRA-202ENST00000318266 SERF1AO75920 110 aa8.17□□□□□ -1.1
PTPRA-202ENST00000318266 VAMP5O95183 116 aa8.17□□□□□ -1.1
PTPRA-202ENST00000318266 SRP14P37108 136 aaKnown RBP8.17□□□□□ -1.1
PTPRA-202ENST00000318266 GNG10P50151 68 aa8.17□□□□□ -1.1
PTPRA-202ENST00000318266 RPL15P61313 204 aaKnown RBP8.17□□□□□ -1.1
PTPRA-202ENST00000318266 MRPS11P82912 194 aaKnown RBP8.17□□□□□ -1.1
PTPRA-202ENST00000318266 ZNF816Q0VGE8 651 aaPredicted RBP8.17□□□□□ -1.1
PTPRA-202ENST00000318266 FAM53AQ6NSI3 398 aaPredicted RBP8.17□□□□□ -1.1
PTPRA-202ENST00000318266 MCEMP1Q8IX19 187 aa8.17□□□□□ -1.1
PTPRA-202ENST00000318266 MKXQ8IYA7 352 aa8.17□□□□□ -1.1
PTPRA-202ENST00000318266 OR1L1Q8NH94 360 aa8.17□□□□□ -1.1
PTPRA-202ENST00000318266 RNF138Q8WVD3 245 aa8.17□□□□□ -1.1
PTPRA-202ENST00000318266 ZDHHC16Q969W1 377 aa8.17□□□□□ -1.1
PTPRA-202ENST00000318266 WDYHV1Q96HA8 205 aa8.17□□□□□ -1.1
PTPRA-202ENST00000318266 VAMP8Q9BV40 100 aa8.17□□□□□ -1.1
PTPRA-202ENST00000318266 ZNF552Q9H707 407 aaPredicted RBP8.17□□□□□ -1.1
PTPRA-202ENST00000318266 TMEM9BQ9NQ34 198 aa8.17□□□□□ -1.1
PTPRA-202ENST00000318266 RBFOX2O43251 390 aaKnown RBP eCLIP8.17□□□□□ -1.13e-8■■■■■ 34.2
PTPRA-202ENST00000318266 PIAS2O75928 621 aa8.17□□□□□ -1.1
PTPRA-202ENST00000318266 FRMD6-AS1P0C7T7 363 aa8.17□□□□□ -1.1
PTPRA-202ENST00000318266 G6PCP35575 357 aa8.17□□□□□ -1.1
PTPRA-202ENST00000318266 CLDN15P56746 228 aa8.17□□□□□ -1.1
PTPRA-202ENST00000318266 CARD18P57730 90 aa8.17□□□□□ -1.1
PTPRA-202ENST00000318266 KRTDAPP60985 99 aa8.17□□□□□ -1.1
PTPRA-202ENST00000318266 ZNF585BQ52M93 769 aa8.17□□□□□ -1.1
PTPRA-202ENST00000318266 ZNF808Q8N4W9 903 aaPredicted RBP8.17□□□□□ -1.1
PTPRA-202ENST00000318266 C11orf42Q8N5U0 333 aa8.17□□□□□ -1.1
PTPRA-202ENST00000318266 DNAJC4Q9NNZ3 241 aa8.17□□□□□ -1.1
PTPRA-202ENST00000318266 FSCN3Q9NQT6 498 aa8.17□□□□□ -1.1
PTPRA-202ENST00000318266 TUBG2Q9NRH3 451 aa8.17□□□□□ -1.1
PTPRA-202ENST00000318266 MRPS18CQ9Y3D5 142 aaKnown RBP8.17□□□□□ -1.1
PTPRA-202ENST00000318266 PXMP4Q9Y6I8 212 aa8.17□□□□□ -1.1
PTPRA-202ENST00000318266 PRRC2CQ9Y520 2896 aaKnown RBP8.17□□□□□ -1.1
PTPRA-202ENST00000318266 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.16□□□□□ -1.1
PTPRA-202ENST00000318266 C5orf49A4QMS7 147 aa8.16□□□□□ -1.1
PTPRA-202ENST00000318266 RAMP3O60896 148 aa8.16□□□□□ -1.1
PTPRA-202ENST00000318266 CD27P26842 260 aa8.16□□□□□ -1.1
PTPRA-202ENST00000318266 GNB1P62873 340 aa8.16□□□□□ -1.1
PTPRA-202ENST00000318266 MMDQ15546 238 aa8.16□□□□□ -1.1
PTPRA-202ENST00000318266 Q6ZVH6 145 aa8.16□□□□□ -1.1
PTPRA-202ENST00000318266 CENPVQ7Z7K6 275 aaPredicted RBP8.16□□□□□ -1.1
PTPRA-202ENST00000318266 BAGE3Q86Y29 109 aa8.16□□□□□ -1.1
PTPRA-202ENST00000318266 BAGE2Q86Y30 109 aa8.16□□□□□ -1.1
PTPRA-202ENST00000318266 FGFRL1Q8N441 504 aa8.16□□□□□ -1.1
PTPRA-202ENST00000318266 ZNF709Q8N972 641 aa8.16□□□□□ -1.1
PTPRA-202ENST00000318266 ABHD3Q8WU67 409 aa8.16□□□□□ -1.1
PTPRA-202ENST00000318266 MIEN1Q9BRT3 115 aa8.16□□□□□ -1.1
PTPRA-202ENST00000318266 M0QZK8 103 aa8.16□□□□□ -1.1
PTPRA-202ENST00000318266 SLC17A3O00476 420 aa8.16□□□□□ -1.1
PTPRA-202ENST00000318266 TYMSP04818 313 aa8.16□□□□□ -1.1
PTPRA-202ENST00000318266 CTXN2P0C2S0 81 aa8.16□□□□□ -1.1
PTPRA-202ENST00000318266 MRPL21Q7Z2W9 205 aaKnown RBP8.16□□□□□ -1.1
PTPRA-202ENST00000318266 FOXJ2Q9P0K8 574 aa8.16□□□□□ -1.1
PTPRA-202ENST00000318266 TOX3O15405 576 aaPredicted RBP8.16□□□□□ -1.1
PTPRA-202ENST00000318266 ZG16O60844 167 aa8.16□□□□□ -1.1
PTPRA-202ENST00000318266 NGFP01138 241 aa8.16□□□□□ -1.1
PTPRA-202ENST00000318266 LIFP15018 202 aa8.16□□□□□ -1.1
PTPRA-202ENST00000318266 COX5AP20674 150 aa8.16□□□□□ -1.1
PTPRA-202ENST00000318266 EDDM3BP56851 147 aa8.16□□□□□ -1.1
PTPRA-202ENST00000318266 TPTE2P1Q5T6R2 138 aa8.16□□□□□ -1.1
PTPRA-202ENST00000318266 SLC25A45Q8N413 288 aa8.16□□□□□ -1.1
PTPRA-202ENST00000318266 RIMS4Q9H426 269 aaPredicted RBP8.16□□□□□ -1.1
PTPRA-202ENST00000318266 GPR35Q9HC97 309 aa8.16□□□□□ -1.1
PTPRA-202ENST00000318266 TRAV24A0A0B4J272 114 aa8.15□□□□□ -1.1
PTPRA-202ENST00000318266 A0A0G2JMM0 328 aa8.15□□□□□ -1.1
PTPRA-202ENST00000318266 MDFIC2A0A1B0GVS7 189 aa8.15□□□□□ -1.1
PTPRA-202ENST00000318266 A0A1W2PPB8 328 aa8.15□□□□□ -1.1
PTPRA-202ENST00000318266 A0A1W2PRS3 328 aa8.15□□□□□ -1.1
PTPRA-202ENST00000318266 KIR3DP1A8MWS1 328 aa8.15□□□□□ -1.1
PTPRA-202ENST00000318266 IGLV2-14P01704 120 aa8.15□□□□□ -1.1
PTPRA-202ENST00000318266 SERPINA7P05543 415 aa8.15□□□□□ -1.1
PTPRA-202ENST00000318266 GLB1P16278 677 aa8.15□□□□□ -1.1
PTPRA-202ENST00000318266 CD82P27701 267 aa8.15□□□□□ -1.1
PTPRA-202ENST00000318266 LINC00205P59089 165 aa8.15□□□□□ -1.1
PTPRA-202ENST00000318266 RNPS1Q15287 305 aaKnown RBP8.15□□□□□ -1.1
PTPRA-202ENST00000318266 TMEM183BQ1AE95 376 aa8.15□□□□□ -1.1
PTPRA-202ENST00000318266 NUFIP2Q7Z417 695 aaKnown RBP8.15□□□□□ -1.1
PTPRA-202ENST00000318266 BTF3L4Q96K17 158 aa8.15□□□□□ -1.1
PTPRA-202ENST00000318266 TRAPPC2LQ9UL33 140 aa8.15□□□□□ -1.1
PTPRA-202ENST00000318266 TP53TG3Q9ULZ0 132 aa8.15□□□□□ -1.1
PTPRA-202ENST00000318266 RNF114Q9Y508 228 aa8.15□□□□□ -1.1
PTPRA-202ENST00000318266 TRBV20OR9-2A0A075B6H5 130 aa8.15□□□□□ -1.11
PTPRA-202ENST00000318266 IGLV3-12A0A075B6K2 115 aa8.15□□□□□ -1.11
PTPRA-202ENST00000318266 RHBDL1O75783 438 aa8.15□□□□□ -1.11
PTPRA-202ENST00000318266 TNFSF13O75888 250 aa8.15□□□□□ -1.11
PTPRA-202ENST00000318266 SRFP11831 508 aa8.15□□□□□ -1.11
PTPRA-202ENST00000318266 CRISP2P16562 243 aa8.15□□□□□ -1.11
PTPRA-202ENST00000318266 KITLGP21583 273 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms