RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 H2AFB2P0C5Z0 115 aa12.49□□□□□ -0.41
PDLIM5-202ENST00000318007 NCR3LG1Q68D85 454 aa12.49□□□□□ -0.41
PDLIM5-202ENST00000318007 ZNF596Q8TC21 504 aa12.49□□□□□ -0.41
PDLIM5-202ENST00000318007 LINC00473A8K010 186 aa12.49□□□□□ -0.41
PDLIM5-202ENST00000318007 A8MV72 311 aaPredicted RBP12.49□□□□□ -0.41
PDLIM5-202ENST00000318007 GPR31O00270 319 aa12.49□□□□□ -0.41
PDLIM5-202ENST00000318007 PEX14O75381 377 aa12.49□□□□□ -0.41
PDLIM5-202ENST00000318007 GATA3P23771 443 aa12.49□□□□□ -0.41
PDLIM5-202ENST00000318007 HTR1DP28221 377 aa12.49□□□□□ -0.41
PDLIM5-202ENST00000318007 OXA1LQ15070 435 aa12.49□□□□□ -0.41
PDLIM5-202ENST00000318007 SLC9A3R2Q15599 337 aa12.49□□□□□ -0.41
PDLIM5-202ENST00000318007 TMEM30BQ3MIR4 351 aa12.49□□□□□ -0.41
PDLIM5-202ENST00000318007 C4orf46Q504U0 113 aa12.49□□□□□ -0.41
PDLIM5-202ENST00000318007 TBC1D26Q86UD7 250 aa12.49□□□□□ -0.41
PDLIM5-202ENST00000318007 CMTM1Q8IZ96 169 aa12.49□□□□□ -0.41
PDLIM5-202ENST00000318007 DYNAPQ8N1N2 210 aa12.49□□□□□ -0.41
PDLIM5-202ENST00000318007 OR11H6Q8NGC7 330 aa12.49□□□□□ -0.41
PDLIM5-202ENST00000318007 CASTOR1Q8WTX7 329 aa12.49□□□□□ -0.41
PDLIM5-202ENST00000318007 RTN4IP1Q8WWV3 396 aaPredicted RBP12.49□□□□□ -0.41
PDLIM5-202ENST00000318007 TMEM230Q96A57 120 aa12.49□□□□□ -0.41
PDLIM5-202ENST00000318007 SEC22CQ9BRL7 303 aa12.49□□□□□ -0.41
PDLIM5-202ENST00000318007 RSRP1Q9BUV0 290 aa12.49□□□□□ -0.41
PDLIM5-202ENST00000318007 MRPL20Q9BYC9 149 aaKnown RBP12.49□□□□□ -0.41
PDLIM5-202ENST00000318007 TOLLIPQ9H0E2 274 aa12.49□□□□□ -0.41
PDLIM5-202ENST00000318007 UNKLQ9H9P5 680 aaKnown RBP12.49□□□□□ -0.41
PDLIM5-202ENST00000318007 PIPOXQ9P0Z9 390 aa12.49□□□□□ -0.41
PDLIM5-202ENST00000318007 NUBP2Q9Y5Y2 271 aa12.49□□□□□ -0.41
PDLIM5-202ENST00000318007 MAST4O15021 2626 aa12.48□□□□□ -0.41
PDLIM5-202ENST00000318007 TEX13DA0A0J9YY54 714 aaPredicted RBP12.48□□□□□ -0.41
PDLIM5-202ENST00000318007 ODF3BA8MYP8 253 aa12.48□□□□□ -0.41
PDLIM5-202ENST00000318007 NPFFO15130 113 aa12.48□□□□□ -0.41
PDLIM5-202ENST00000318007 CD99P14209 185 aa12.48□□□□□ -0.41
PDLIM5-202ENST00000318007 EPHA1P21709 976 aa12.48□□□□□ -0.41
PDLIM5-202ENST00000318007 CD34P28906 385 aa12.48□□□□□ -0.41
PDLIM5-202ENST00000318007 RAB13P51153 203 aa12.48□□□□□ -0.41
PDLIM5-202ENST00000318007 UBE2E1P51965 193 aa12.48□□□□□ -0.41
PDLIM5-202ENST00000318007 RPL30P62888 115 aaKnown RBP12.48□□□□□ -0.41
PDLIM5-202ENST00000318007 DUSP18Q8NEJ0 188 aa12.48□□□□□ -0.41
PDLIM5-202ENST00000318007 ZFAND1Q8TCF1 268 aa12.48□□□□□ -0.41
PDLIM5-202ENST00000318007 TCTEX1D2Q8WW35 142 aa12.48□□□□□ -0.41
PDLIM5-202ENST00000318007 RPEQ96AT9 228 aa12.48□□□□□ -0.41
PDLIM5-202ENST00000318007 GSX1Q9H4S2 264 aaPredicted RBP12.48□□□□□ -0.41
PDLIM5-202ENST00000318007 IGHV1-69DA0A0B4J2H0 117 aa12.47□□□□□ -0.41
PDLIM5-202ENST00000318007 MDFIC2A0A1B0GVS7 189 aa12.47□□□□□ -0.41
PDLIM5-202ENST00000318007 INMT-MINDY4F8WBC2 141 aa12.47□□□□□ -0.41
PDLIM5-202ENST00000318007 LY6G6DO95868 133 aa12.47□□□□□ -0.41
PDLIM5-202ENST00000318007 IGHV1-69P01742 117 aa12.47□□□□□ -0.41
PDLIM5-202ENST00000318007 VSIG10L2P0DP72 767 aa12.47□□□□□ -0.41
PDLIM5-202ENST00000318007 CBX3Q13185 183 aa12.47□□□□□ -0.41
PDLIM5-202ENST00000318007 PPP1R1AQ13522 171 aa12.47□□□□□ -0.41
PDLIM5-202ENST00000318007 LIN54Q6MZP7 749 aa12.47□□□□□ -0.41
PDLIM5-202ENST00000318007 KCTD9Q7L273 389 aa12.47□□□□□ -0.41
PDLIM5-202ENST00000318007 BEND2Q8NDZ0 799 aa12.47□□□□□ -0.41
PDLIM5-202ENST00000318007 FAM210AQ96ND0 272 aa12.47□□□□□ -0.41
PDLIM5-202ENST00000318007 S1PR3Q99500 378 aa12.47□□□□□ -0.41
PDLIM5-202ENST00000318007 ZNF251Q9BRH9 671 aa12.47□□□□□ -0.41
PDLIM5-202ENST00000318007 ANK3Q12955 4377 aaKnown RBP12.47□□□□□ -0.41
PDLIM5-202ENST00000318007 A0A0U1RQK1 487 aa12.47□□□□□ -0.41
PDLIM5-202ENST00000318007 PGLYRP1O75594 196 aaPredicted RBP12.47□□□□□ -0.41
PDLIM5-202ENST00000318007 HLA-AP01891 365 aaKnown RBP12.47□□□□□ -0.41
PDLIM5-202ENST00000318007 CTSDP07339 412 aaPredicted RBP12.47□□□□□ -0.41
PDLIM5-202ENST00000318007 RPA2P15927 270 aa12.47□□□□□ -0.41
PDLIM5-202ENST00000318007 TGIF2LXQ8IUE1 241 aa12.47□□□□□ -0.41
PDLIM5-202ENST00000318007 BCL6BQ8N143 479 aaPredicted RBP12.47□□□□□ -0.41
PDLIM5-202ENST00000318007 ZDHHC22Q8N966 263 aa12.47□□□□□ -0.41
PDLIM5-202ENST00000318007 UXS1Q8NBZ7 420 aa12.47□□□□□ -0.41
PDLIM5-202ENST00000318007 CHPT1Q8WUD6 406 aa12.47□□□□□ -0.41
PDLIM5-202ENST00000318007 DMRTB1Q96MA1 342 aa12.47□□□□□ -0.41
PDLIM5-202ENST00000318007 A0A0B4J293 547 aa12.46□□□□□ -0.41
PDLIM5-202ENST00000318007 A0A1B0GVG6 124 aa12.46□□□□□ -0.41
PDLIM5-202ENST00000318007 CD5LO43866 347 aa12.46□□□□□ -0.41
PDLIM5-202ENST00000318007 RAMP3O60896 148 aa12.46□□□□□ -0.41
PDLIM5-202ENST00000318007 OR5AC1P0C628 307 aa12.46□□□□□ -0.41
PDLIM5-202ENST00000318007 UCP3P55916 312 aa12.46□□□□□ -0.41
PDLIM5-202ENST00000318007 ZNF816Q0VGE8 651 aaPredicted RBP12.46□□□□□ -0.41
PDLIM5-202ENST00000318007 FAM120AOSQ5T036 256 aa12.46□□□□□ -0.41
PDLIM5-202ENST00000318007 LPCAT3Q6P1A2 487 aa12.46□□□□□ -0.41
PDLIM5-202ENST00000318007 SPNS3Q6ZMD2 512 aa12.46□□□□□ -0.41
PDLIM5-202ENST00000318007 MOB3BQ86TA1 216 aa12.46□□□□□ -0.41
PDLIM5-202ENST00000318007 BVESQ8NE79 360 aa12.46□□□□□ -0.41
PDLIM5-202ENST00000318007 TP53RKQ96S44 253 aa12.46□□□□□ -0.41
PDLIM5-202ENST00000318007 DPM3Q9P2X0 92 aa12.46□□□□□ -0.41
PDLIM5-202ENST00000318007 LEUTXA8MZ59 168 aa12.45□□□□□ -0.42
PDLIM5-202ENST00000318007 J3QLI3 93 aa12.45□□□□□ -0.42
PDLIM5-202ENST00000318007 OR4E1P0C645 316 aa12.45□□□□□ -0.42
PDLIM5-202ENST00000318007 IL3RAP26951 378 aa12.45□□□□□ -0.42
PDLIM5-202ENST00000318007 ECI1P42126 302 aa12.45□□□□□ -0.42
PDLIM5-202ENST00000318007 SURF2Q15527 256 aaPredicted RBP12.45□□□□□ -0.42
PDLIM5-202ENST00000318007 TATDN3Q17R31 274 aa12.45□□□□□ -0.42
PDLIM5-202ENST00000318007 LINC00311Q8N616 119 aa12.45□□□□□ -0.42
PDLIM5-202ENST00000318007 SCGB3A2Q96PL1 93 aa12.45□□□□□ -0.42
PDLIM5-202ENST00000318007 AMMECR1Q9Y4X0 333 aaPredicted RBP12.45□□□□□ -0.42
PDLIM5-202ENST00000318007 MTORP42345 2549 aa12.45□□□□□ -0.42
PDLIM5-202ENST00000318007 H7C2Y5 167 aa12.45□□□□□ -0.42
PDLIM5-202ENST00000318007 MPPED1O15442 326 aa12.45□□□□□ -0.42
PDLIM5-202ENST00000318007 FCGR3BO75015 233 aa12.45□□□□□ -0.42
PDLIM5-202ENST00000318007 CT45A6P0DMU7 189 aa12.45□□□□□ -0.42
PDLIM5-202ENST00000318007 CT45A5P0DMU8 189 aa12.45□□□□□ -0.42
PDLIM5-202ENST00000318007 CT45A7P0DMV0 189 aa12.45□□□□□ -0.42
PDLIM5-202ENST00000318007 DUTP33316 252 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms