RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 CATR1Q13166 79 aa11.51□□□□□ -0.57
ATG4C-201ENST00000317868 VWC2Q2TAL6 325 aa11.51□□□□□ -0.57
ATG4C-201ENST00000317868 TMEM41BQ5BJD5 291 aa11.51□□□□□ -0.57
ATG4C-201ENST00000317868 KRBOX4Q5JUW0 171 aa11.51□□□□□ -0.57
ATG4C-201ENST00000317868 TRAT1Q6PIZ9 186 aa11.51□□□□□ -0.57
ATG4C-201ENST00000317868 ZNF66Q6ZN08 573 aa11.51□□□□□ -0.57
ATG4C-201ENST00000317868 FAM24BQ8N5W8 94 aa11.51□□□□□ -0.57
ATG4C-201ENST00000317868 MRGPRDQ8TDS7 321 aa11.51□□□□□ -0.57
ATG4C-201ENST00000317868 OPN3Q9H1Y3 402 aaPredicted RBP11.51□□□□□ -0.57
ATG4C-201ENST00000317868 MSL2Q9HCI7 577 aa11.51□□□□□ -0.57
ATG4C-201ENST00000317868 PUS1Q9Y606 427 aaKnown RBP eCLIP11.51□□□□□ -0.57
ATG4C-201ENST00000317868 DSCAMO60469 2012 aa11.51□□□□□ -0.57
ATG4C-201ENST00000317868 hCG_1809904A0A1W2PP81 198 aa11.5□□□□□ -0.57
ATG4C-201ENST00000317868 A0A1W2PR64 198 aa11.5□□□□□ -0.57
ATG4C-201ENST00000317868 A0A1W2PRV1 198 aa11.5□□□□□ -0.57
ATG4C-201ENST00000317868 SRRM5B3KS81 715 aa11.5□□□□□ -0.57
ATG4C-201ENST00000317868 RAB29O14966 203 aa11.5□□□□□ -0.57
ATG4C-201ENST00000317868 MDKP21741 143 aaPredicted RBP11.5□□□□□ -0.57
ATG4C-201ENST00000317868 SSTR5P35346 364 aa11.5□□□□□ -0.57
ATG4C-201ENST00000317868 G6PCP35575 357 aa11.5□□□□□ -0.57
ATG4C-201ENST00000317868 RPL35P42766 123 aaKnown RBP11.5□□□□□ -0.57
ATG4C-201ENST00000317868 BHLHA15Q7RTS1 189 aaPredicted RBP11.5□□□□□ -0.57
ATG4C-201ENST00000317868 FAM90A1Q86YD7 464 aa11.5□□□□□ -0.57
ATG4C-201ENST00000317868 SCGB1C1Q8TD33 95 aa11.5□□□□□ -0.57
ATG4C-201ENST00000317868 TAF15Q92804 592 aaKnown RBP eCLIP11.5□□□□□ -0.57
ATG4C-201ENST00000317868 A0A1W2PPE3 182 aa11.5□□□□□ -0.57
ATG4C-201ENST00000317868 LINC00473A8K010 186 aa11.5□□□□□ -0.57
ATG4C-201ENST00000317868 BCL2P10415 239 aa11.5□□□□□ -0.57
ATG4C-201ENST00000317868 SLC38A11Q08AI6 406 aa11.5□□□□□ -0.57
ATG4C-201ENST00000317868 C3orf36Q3SXR2 165 aa11.5□□□□□ -0.57
ATG4C-201ENST00000317868 IGFL3Q6UXB1 125 aa11.5□□□□□ -0.57
ATG4C-201ENST00000317868 ZNF429Q86V71 674 aa11.5□□□□□ -0.57
ATG4C-201ENST00000317868 PINX1Q96BK5 328 aaKnown RBP11.5□□□□□ -0.57
ATG4C-201ENST00000317868 FZR1Q9UM11 496 aa11.5□□□□□ -0.57
ATG4C-201ENST00000317868 PROCRQ9UNN8 238 aa11.5□□□□□ -0.57
ATG4C-201ENST00000317868 EGR1P18146 543 aa11.49□□□□□ -0.57
ATG4C-201ENST00000317868 GABRA2P47869 451 aa11.49□□□□□ -0.57
ATG4C-201ENST00000317868 SPANXN5Q5MJ07 72 aa11.49□□□□□ -0.57
ATG4C-201ENST00000317868 CA5BP1Q8WTZ4 195 aa11.49□□□□□ -0.57
ATG4C-201ENST00000317868 METTL1Q9UBP6 276 aaKnown RBP11.49□□□□□ -0.57
ATG4C-201ENST00000317868 DOCK11Q5JSL3 2073 aa11.49□□□□□ -0.57
ATG4C-201ENST00000317868 SNRPEP62304 92 aaKnown RBP11.49□□□□□ -0.57
ATG4C-201ENST00000317868 DLK1P80370 383 aa11.49□□□□□ -0.57
ATG4C-201ENST00000317868 ZNF787Q6DD87 383 aa11.49□□□□□ -0.57
ATG4C-201ENST00000317868 LILRB2Q8N423 598 aa11.49□□□□□ -0.57
ATG4C-201ENST00000317868 TVP23CQ96ET8 276 aa11.49□□□□□ -0.57
ATG4C-201ENST00000317868 P2RX4Q99571 388 aa11.49□□□□□ -0.57
ATG4C-201ENST00000317868 HSD17B10Q99714 261 aaKnown RBP11.49□□□□□ -0.57
ATG4C-201ENST00000317868 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.49□□□□□ -0.57
ATG4C-201ENST00000317868 DSPP15924 2871 aaKnown RBP11.49□□□□□ -0.57
ATG4C-201ENST00000317868 IGKV1D-17A0A075B6S4 117 aa11.49□□□□□ -0.57
ATG4C-201ENST00000317868 CXorf65A6NEN9 183 aa11.49□□□□□ -0.57
ATG4C-201ENST00000317868 NDUFS6O75380 124 aaKnown RBP11.49□□□□□ -0.57
ATG4C-201ENST00000317868 EIF3GO75821 320 aaKnown RBP eCLIP11.49□□□□□ -0.57
ATG4C-201ENST00000317868 OR2C1O95371 312 aa11.49□□□□□ -0.57
ATG4C-201ENST00000317868 ADH4P08319 380 aa11.49□□□□□ -0.57
ATG4C-201ENST00000317868 GCH1P30793 250 aa11.49□□□□□ -0.57
ATG4C-201ENST00000317868 FABP6P51161 128 aa11.49□□□□□ -0.57
ATG4C-201ENST00000317868 MZT1Q08AG7 82 aa11.49□□□□□ -0.57
ATG4C-201ENST00000317868 ATP6V1FQ16864 119 aa11.49□□□□□ -0.57
ATG4C-201ENST00000317868 EIF2S3LQ2VIR3 472 aaKnown RBP11.49□□□□□ -0.57
ATG4C-201ENST00000317868 IQCF2Q8IXL9 164 aa11.49□□□□□ -0.57
ATG4C-201ENST00000317868 LRRC29Q8WV35 223 aa11.49□□□□□ -0.57
ATG4C-201ENST00000317868 ZNF665Q9H7R5 613 aa11.49□□□□□ -0.57
ATG4C-201ENST00000317868 SIRT7Q9NRC8 400 aa11.49□□□□□ -0.57
ATG4C-201ENST00000317868 UFSP2Q9NUQ7 469 aa11.49□□□□□ -0.57
ATG4C-201ENST00000317868 LAMP3Q9UQV4 416 aa11.49□□□□□ -0.57
ATG4C-201ENST00000317868 PROP1O75360 226 aa11.48□□□□□ -0.57
ATG4C-201ENST00000317868 IGKV1D-33P01593 117 aa11.48□□□□□ -0.57
ATG4C-201ENST00000317868 IGKV1-33P01594 117 aa11.48□□□□□ -0.57
ATG4C-201ENST00000317868 MEOX2P50222 304 aa11.48□□□□□ -0.57
ATG4C-201ENST00000317868 ZNF816Q0VGE8 651 aaPredicted RBP11.48□□□□□ -0.57
ATG4C-201ENST00000317868 SLC25A24Q6NUK1 477 aa11.48□□□□□ -0.57
ATG4C-201ENST00000317868 BEND4Q6ZU67 534 aa11.48□□□□□ -0.57
ATG4C-201ENST00000317868 ZNF808Q8N4W9 903 aaPredicted RBP11.48□□□□□ -0.57
ATG4C-201ENST00000317868 NINJ1Q92982 152 aa11.48□□□□□ -0.57
ATG4C-201ENST00000317868 C12orf57Q99622 126 aa11.48□□□□□ -0.57
ATG4C-201ENST00000317868 DMXL1Q9Y485 3027 aa11.48□□□□□ -0.57
ATG4C-201ENST00000317868 ELOBQ15370 118 aa11.48□□□□□ -0.57
ATG4C-201ENST00000317868 BSNQ9UPA5 3926 aa11.48□□□□□ -0.57
ATG4C-201ENST00000317868 CACNA1DQ01668 2161 aa11.47□□□□□ -0.57
ATG4C-201ENST00000317868 UBE2L5PA0A1B0GUS4 154 aa11.47□□□□□ -0.57
ATG4C-201ENST00000317868 B4DEV8 164 aa11.47□□□□□ -0.57
ATG4C-201ENST00000317868 CLDN1O95832 211 aa11.47□□□□□ -0.57
ATG4C-201ENST00000317868 KRASP01116 189 aa11.47□□□□□ -0.57
ATG4C-201ENST00000317868 IGHV3-13P01766 116 aa11.47□□□□□ -0.57
ATG4C-201ENST00000317868 PRDX2P32119 198 aa11.47□□□□□ -0.57
ATG4C-201ENST00000317868 EIF2S3P41091 472 aaKnown RBP11.47□□□□□ -0.57
ATG4C-201ENST00000317868 NKX6-1P78426 367 aaPredicted RBP11.47□□□□□ -0.57
ATG4C-201ENST00000317868 DEFB109BQ30KR1 87 aa11.47□□□□□ -0.57
ATG4C-201ENST00000317868 BTNL3Q6UXE8 466 aa11.47□□□□□ -0.57
ATG4C-201ENST00000317868 TPRX1Q8N7U7 411 aa11.47□□□□□ -0.57
ATG4C-201ENST00000317868 NIPSNAP3BQ9BS92 247 aa11.47□□□□□ -0.57
ATG4C-201ENST00000317868 FAM90A9PA6NNJ1 464 aa11.47□□□□□ -0.57
ATG4C-201ENST00000317868 LHBP01229 141 aa11.47□□□□□ -0.57
ATG4C-201ENST00000317868 AKR1D1P51857 326 aa11.47□□□□□ -0.57
ATG4C-201ENST00000317868 PDLIM3Q53GG5 364 aaPredicted RBP11.47□□□□□ -0.57
ATG4C-201ENST00000317868 RPP25LQ8N5L8 163 aaKnown RBP11.47□□□□□ -0.57
ATG4C-201ENST00000317868 TCTEX1D2Q8WW35 142 aa11.47□□□□□ -0.57
ATG4C-201ENST00000317868 GNG13Q9P2W3 67 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms