RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 RELBQ01201 579 aa6.42□□□□□ -1.38
CNOT4-201ENST00000315544 ZNF645Q8N7E2 425 aa6.42□□□□□ -1.38
CNOT4-201ENST00000315544 FDCSPQ8NFU4 85 aa6.42□□□□□ -1.38
CNOT4-201ENST00000315544 GATAD1Q8WUU5 269 aa6.42□□□□□ -1.38
CNOT4-201ENST00000315544 CORO2AQ92828 525 aa6.42□□□□□ -1.38
CNOT4-201ENST00000315544 SPTSSAQ969W0 71 aa6.42□□□□□ -1.38
CNOT4-201ENST00000315544 ST6GALNAC6Q969X2 333 aa6.42□□□□□ -1.38
CNOT4-201ENST00000315544 ZNF488Q96MN9 340 aa6.42□□□□□ -1.38
CNOT4-201ENST00000315544 PLSCR4Q9NRQ2 329 aa6.42□□□□□ -1.38
CNOT4-201ENST00000315544 KLRF1Q9NZS2 232 aa6.42□□□□□ -1.38
CNOT4-201ENST00000315544 MPC1Q9Y5U8 109 aa6.42□□□□□ -1.38
CNOT4-201ENST00000315544 A0A087X0M5 115 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 A0A1B0GX30 115 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 CYB5R3P00387 301 aaPredicted RBP6.41□□□□□ -1.38
CNOT4-201ENST00000315544 FRMD6-AS1P0C7T7 363 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 MPV17P39210 176 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 FABP9Q0Z7S8 132 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 SPIN3Q5JUX0 258 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 C10orf53Q8N6V4 93 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 SAA2-SAA4A0A096LPE2 208 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 LRP5LA4QPB2 252 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 IFNL4K9M1U5 179 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 CXCL13O43927 109 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 ARF1P84077 181 aaKnown RBP6.41□□□□□ -1.38
CNOT4-201ENST00000315544 JOSD1Q15040 202 aaPredicted RBP6.41□□□□□ -1.38
CNOT4-201ENST00000315544 SPINK14Q6IE38 97 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 SLC16A13Q7RTY0 426 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 SGPP2Q8IWX5 399 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 PIP4P2Q8N4L2 257 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 OR5C1Q8NGR4 320 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 FAM167A-AS1Q96KT0 104 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 PLEKHJ1Q9NW61 149 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 WDR83OSQ9Y284 106 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 ARL2-SNX15V9GYD0 113 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 SRRM4A7MD48 611 aaKnown RBP6.41□□□□□ -1.38
CNOT4-201ENST00000315544 HS3ST1O14792 307 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 IGLV2-23P01705 113 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 RNF224P0DH78 156 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 GABRR1P24046 479 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 ERVS71-1P61550 626 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 TNFRSF9Q07011 255 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 FOXF2Q12947 444 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 FAM209BQ5JX69 171 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 SSX9Q7RTT3 188 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 LINC01551Q86U37 167 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 FAM24BQ8N5W8 94 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 PGAM5Q96HS1 289 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 ULBP2Q9BZM5 246 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 LUZP4Q9P127 313 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 PXMP4Q9Y6I8 212 aa6.41□□□□□ -1.38
CNOT4-201ENST00000315544 OR5B21A6NL26 309 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 LRRC30A6NM36 301 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 CD300LBA8K4G0 201 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 C12orf77C9JDV5 145 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 TMEM250H0YL14 139 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 CDIPTO14735 213 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 OR6A2O95222 327 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 ADH4P08319 380 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 VAMP1P23763 118 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 GNB1P62873 340 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 SMCO1Q147U7 214 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 FOXRED2Q8IWF2 684 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 ZFP82Q8N141 532 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 C1orf162Q8NEQ5 155 aaPredicted RBP6.4□□□□□ -1.38
CNOT4-201ENST00000315544 OR5L1Q8NGL2 311 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 C14orf79Q96F83 325 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 KCNJ16Q9NPI9 418 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 AURKAIP1Q9NWT8 199 aaPredicted RBP6.4□□□□□ -1.38
CNOT4-201ENST00000315544 TP53TG5Q9Y2B4 290 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 PKD1L2Q7Z442 2459 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 F5H5K5 113 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 NXPH3O95157 252 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 FABP1P07148 127 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 EGR1P18146 543 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 CCKARP32238 428 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 CARD18P57730 90 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 SRPXP78539 464 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 FOXL1Q12952 345 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 ZDHHC23Q8IYP9 409 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 MGST2Q99735 147 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 C2orf88Q9BSF0 95 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 RSG1Q9BU20 258 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 METTL7AQ9H8H3 244 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 SPACA1Q9HBV2 294 aa6.4□□□□□ -1.38
CNOT4-201ENST00000315544 J3QT63 122 aa6.4□□□□□ -1.39
CNOT4-201ENST00000315544 AQP7O14520 342 aa6.4□□□□□ -1.39
CNOT4-201ENST00000315544 KLK3P07288 261 aaPredicted RBP6.4□□□□□ -1.39
CNOT4-201ENST00000315544 OR9G9P0C7N8 305 aa6.4□□□□□ -1.39
CNOT4-201ENST00000315544 TRGC1P0CF51 173 aa6.4□□□□□ -1.39
CNOT4-201ENST00000315544 ASCL1P50553 236 aa6.4□□□□□ -1.39
CNOT4-201ENST00000315544 IDH3GP51553 393 aaPredicted RBP6.4□□□□□ -1.39
CNOT4-201ENST00000315544 ARSJQ5FYB0 599 aaPredicted RBP6.4□□□□□ -1.39
CNOT4-201ENST00000315544 ATP1A1-AS1Q5TC04 95 aa6.4□□□□□ -1.39
CNOT4-201ENST00000315544 ACP7Q6ZNF0 438 aa6.4□□□□□ -1.39
CNOT4-201ENST00000315544 YRDCQ86U90 279 aaKnown RBP6.4□□□□□ -1.39
CNOT4-201ENST00000315544 VASH2Q86V25 355 aa6.4□□□□□ -1.39
CNOT4-201ENST00000315544 RDH5Q92781 318 aa6.4□□□□□ -1.39
CNOT4-201ENST00000315544 RAB24Q969Q5 203 aa6.4□□□□□ -1.39
CNOT4-201ENST00000315544 RBMXL1Q96E39 390 aaKnown RBP6.4□□□□□ -1.39
CNOT4-201ENST00000315544 ABHD17AQ96GS6 310 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms