RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 HNF1AP20823 631 aa7.64□□□□□ -1.19
COL6A5-202ENST00000312481 H2BFSP57053 126 aa7.64□□□□□ -1.19
COL6A5-202ENST00000312481 ANKRD34AQ69YU3 496 aa7.64□□□□□ -1.19
COL6A5-202ENST00000312481 GAPTQ8N292 157 aa7.64□□□□□ -1.19
COL6A5-202ENST00000312481 OSR1Q8TAX0 266 aaPredicted RBP7.64□□□□□ -1.19
COL6A5-202ENST00000312481 LPAR5Q9H1C0 372 aa7.64□□□□□ -1.19
COL6A5-202ENST00000312481 OR2M3Q8NG83 312 aa7.64□□□□□ -1.19
COL6A5-202ENST00000312481 SNRNP40Q96DI7 357 aaKnown RBP7.64□□□□□ -1.19
COL6A5-202ENST00000312481 HEXA-AS1Q9H8Q6 139 aa7.64□□□□□ -1.19
COL6A5-202ENST00000312481 SLC25A10Q9UBX3 287 aaPredicted RBP7.64□□□□□ -1.19
COL6A5-202ENST00000312481 A0A1B0GV72 72 aa7.64□□□□□ -1.19
COL6A5-202ENST00000312481 CXCL13O43927 109 aa7.64□□□□□ -1.19
COL6A5-202ENST00000312481 TWIST1Q15672 202 aa7.64□□□□□ -1.19
COL6A5-202ENST00000312481 Q8WTZ3 238 aa7.64□□□□□ -1.19
COL6A5-202ENST00000312481 TMEM37Q8WXS4 190 aa7.64□□□□□ -1.19
COL6A5-202ENST00000312481 NANOS3P60323 173 aaKnown RBP7.64□□□□□ -1.19
COL6A5-202ENST00000312481 TMEM252Q8N6L7 170 aa7.64□□□□□ -1.19
COL6A5-202ENST00000312481 SIGLEC5O15389 551 aa7.64□□□□□ -1.19
COL6A5-202ENST00000312481 COL8A1P27658 744 aa7.64□□□□□ -1.19
COL6A5-202ENST00000312481 RPL30P62888 115 aaKnown RBP7.64□□□□□ -1.19
COL6A5-202ENST00000312481 LRRC75BQ2VPJ9 315 aa7.64□□□□□ -1.19
COL6A5-202ENST00000312481 OR2B11Q5JQS5 317 aa7.64□□□□□ -1.19
COL6A5-202ENST00000312481 PUSL1Q8N0Z8 303 aaKnown RBP7.64□□□□□ -1.19
COL6A5-202ENST00000312481 SRSF10O75494 262 aaKnown RBP7.64□□□□□ -1.19
COL6A5-202ENST00000312481 RECKO95980 971 aa7.64□□□□□ -1.19
COL6A5-202ENST00000312481 SLC25A5P05141 298 aaKnown RBP7.64□□□□□ -1.19
COL6A5-202ENST00000312481 ACSM6Q6P461 480 aa7.64□□□□□ -1.19
COL6A5-202ENST00000312481 FAM89BQ8N5H3 189 aa7.64□□□□□ -1.19
COL6A5-202ENST00000312481 GNB1LQ9BYB4 327 aa7.64□□□□□ -1.19
COL6A5-202ENST00000312481 ASTLQ6HA08 431 aaPredicted RBP7.63□□□□□ -1.19
COL6A5-202ENST00000312481 SRSF8Q9BRL6 282 aaKnown RBP7.63□□□□□ -1.19
COL6A5-202ENST00000312481 DSCAMO60469 2012 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 EML2O95834 649 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 TYMSP04818 313 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 C5orf17Q8NAS9 161 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 RND1Q92730 232 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 FMC1Q96HJ9 113 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 ABHD14AQ9BUJ0 271 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 NPIPB11E5RHQ5 1161 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 OR10J3Q5JRS4 329 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 MYOZ3Q8TDC0 251 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 IGHV5-51A0A0C4DH38 117 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 LINC00614P0C842 121 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 COL9A2Q14055 689 aaPredicted RBP7.63□□□□□ -1.19
COL6A5-202ENST00000312481 EDDM3AQ14507 147 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 TNFRSF14Q92956 283 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 SMPXQ9UHP9 88 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 DLL1O00548 723 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 HSPB6O14558 160 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 ENSAO43768 121 aaKnown RBP7.63□□□□□ -1.19
COL6A5-202ENST00000312481 RHBDL1O75783 438 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 TMEM255AQ5JRV8 349 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 WNT2BQ93097 391 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 TMEM54Q969K7 222 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 TMEM230Q96A57 120 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 ST20Q9HBF5 79 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 ZNF230Q9UIE0 474 aaPredicted RBP7.63□□□□□ -1.19
COL6A5-202ENST00000312481 DUSP13Q9UII6 198 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 IGLV3-12A0A075B6K2 115 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 ATP5LO75964 103 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 GFERP55789 205 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 C21orf62-AS1Q17RA5 79 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 RNFT1Q5M7Z0 435 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 SLC25A34Q6PIV7 304 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 VASH2Q86V25 355 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 NR2C2APQ86WQ0 139 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 TMEM130Q8N3G9 435 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 APCDD1LQ8NCL9 501 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 RPEQ96AT9 228 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 IGKV1-8A0A0C4DH67 115 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 IAPPP10997 89 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 KIR3DL2P43630 455 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 ERVFRD-1P60508 538 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 FOXL1Q12952 345 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 FAM78BQ5VT40 261 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 YRDCQ86U90 279 aaKnown RBP7.63□□□□□ -1.19
COL6A5-202ENST00000312481 PLPPR1Q8TBJ4 325 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 DNASE2BQ8WZ79 361 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 CSPG4Q6UVK1 2322 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 IGHV1OR15-9A0A0B4J2B8 117 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 MMP23AO75900 390 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 TMEM186Q96B77 213 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 OR51B6Q9H340 312 aa7.63□□□□□ -1.19
COL6A5-202ENST00000312481 ZNF703Q9H7S9 590 aaPredicted RBP7.63□□□□□ -1.19
COL6A5-202ENST00000312481 ACACBO00763 2458 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 GREM1O60565 184 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 P2RY4P51582 365 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 MRPS11P82912 194 aaKnown RBP7.62□□□□□ -1.19
COL6A5-202ENST00000312481 C9orf40Q8IXQ3 194 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 TMEM251Q8N6I4 163 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 SMRP1Q8NCR6 262 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 C8orf44Q96CB5 159 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 MYO9AB2RTY4 2548 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 A0A1W2PNR3 127 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 PRR33A8MZF0 331 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 GAB4Q2WGN9 574 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 FAM71F2Q6NXP2 309 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 LDLRAD3Q86YD5 345 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 NCOR1P1Q9H4R4 102 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 G6PC2Q9NQR9 355 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms