RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 OR51J1Q9H342 316 aa15.48■□□□□ 0.07
PDZRN3-202ENST00000308537 GHITMQ9H3K2 345 aa15.48■□□□□ 0.07
PDZRN3-202ENST00000308537 VCX3AQ9NNX9 186 aa15.48■□□□□ 0.07
PDZRN3-202ENST00000308537 TNCP24821 2201 aa15.47■□□□□ 0.07
PDZRN3-202ENST00000308537 OR5H14A6NHG9 310 aa15.47■□□□□ 0.07
PDZRN3-202ENST00000308537 IGLV1-40P01703 118 aa15.47■□□□□ 0.07
PDZRN3-202ENST00000308537 CD3GP09693 182 aa15.47■□□□□ 0.07
PDZRN3-202ENST00000308537 HIST1H1DP16402 221 aaKnown RBP15.47■□□□□ 0.07
PDZRN3-202ENST00000308537 GNB3P16520 340 aa15.47■□□□□ 0.07
PDZRN3-202ENST00000308537 CRIP2P52943 208 aaPredicted RBP15.47■□□□□ 0.07
PDZRN3-202ENST00000308537 DEFB136Q30KP8 78 aa15.47■□□□□ 0.07
PDZRN3-202ENST00000308537 ZNF383Q8NA42 475 aa15.47■□□□□ 0.07
PDZRN3-202ENST00000308537 EDARADDQ8WWZ3 215 aa15.47■□□□□ 0.07
PDZRN3-202ENST00000308537 GON7Q9BXV9 100 aa15.47■□□□□ 0.07
PDZRN3-202ENST00000308537 KLK15Q9H2R5 256 aa15.47■□□□□ 0.07
PDZRN3-202ENST00000308537 RDH8Q9NYR8 311 aa15.47■□□□□ 0.07
PDZRN3-202ENST00000308537 ELF5Q9UKW6 265 aaPredicted RBP15.47■□□□□ 0.07
PDZRN3-202ENST00000308537 RNF150Q9ULK6 438 aa15.47■□□□□ 0.07
PDZRN3-202ENST00000308537 IGKV1D-8A0A087WSZ0 117 aa15.46■□□□□ 0.07
PDZRN3-202ENST00000308537 K7EIL1 84 aa15.46■□□□□ 0.07
PDZRN3-202ENST00000308537 FABP7O15540 132 aa15.46■□□□□ 0.07
PDZRN3-202ENST00000308537 TNFAIP8O95379 198 aa15.46■□□□□ 0.07
PDZRN3-202ENST00000308537 DUS4LO95620 317 aaKnown RBP15.46■□□□□ 0.07
PDZRN3-202ENST00000308537 EGR2P11161 476 aaPredicted RBP15.46■□□□□ 0.07
PDZRN3-202ENST00000308537 IGSF11Q5DX21 431 aa15.46■□□□□ 0.07
PDZRN3-202ENST00000308537 CXorf66Q5JRM2 361 aaPredicted RBP15.46■□□□□ 0.07
PDZRN3-202ENST00000308537 OR4A4PQ8NGN8 299 aa15.46■□□□□ 0.07
PDZRN3-202ENST00000308537 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.46■□□□□ 0.07
PDZRN3-202ENST00000308537 ZNF230Q9UIE0 474 aaPredicted RBP15.46■□□□□ 0.07
PDZRN3-202ENST00000308537 TRBV6-7A0A0A0MS04 114 aa15.45■□□□□ 0.06
PDZRN3-202ENST00000308537 NUDT19A8MXV4 375 aa15.45■□□□□ 0.06
PDZRN3-202ENST00000308537 FCN1O00602 326 aa15.45■□□□□ 0.06
PDZRN3-202ENST00000308537 RRHO14718 337 aa15.45■□□□□ 0.06
PDZRN3-202ENST00000308537 SOX15O60248 233 aa15.45■□□□□ 0.06
PDZRN3-202ENST00000308537 IGKV1-16P04430 117 aa15.45■□□□□ 0.06
PDZRN3-202ENST00000308537 GSTT2P0CG29 244 aa15.45■□□□□ 0.06
PDZRN3-202ENST00000308537 GSTT2BP0CG30 244 aa15.45■□□□□ 0.06
PDZRN3-202ENST00000308537 VDAC1P21796 283 aa15.45■□□□□ 0.06
PDZRN3-202ENST00000308537 FHL3Q13643 280 aa15.45■□□□□ 0.06
PDZRN3-202ENST00000308537 KIR2DS1Q14954 304 aa15.45■□□□□ 0.06
PDZRN3-202ENST00000308537 LIN54Q6MZP7 749 aa15.45■□□□□ 0.06
PDZRN3-202ENST00000308537 Q6ZS49 121 aa15.45■□□□□ 0.06
PDZRN3-202ENST00000308537 DRAXINQ8NBI3 349 aaPredicted RBP15.45■□□□□ 0.06
PDZRN3-202ENST00000308537 MINDY2Q8NBR6 621 aa15.45■□□□□ 0.06
PDZRN3-202ENST00000308537 MRAPQ8TCY5 172 aa15.45■□□□□ 0.06
PDZRN3-202ENST00000308537 MAFIPQ8WZ33 124 aa15.45■□□□□ 0.06
PDZRN3-202ENST00000308537 CHCHD6Q9BRQ6 235 aa15.45■□□□□ 0.06
PDZRN3-202ENST00000308537 FBXL15Q9H469 300 aa15.45■□□□□ 0.06
PDZRN3-202ENST00000308537 STUB1Q9UNE7 303 aa15.45■□□□□ 0.06
PDZRN3-202ENST00000308537 SSR3Q9UNL2 185 aa15.45■□□□□ 0.06
PDZRN3-202ENST00000308537 WASHC3Q9Y3C0 194 aa15.45■□□□□ 0.06
PDZRN3-202ENST00000308537 WSB1Q9Y6I7 421 aa15.45■□□□□ 0.06
PDZRN3-202ENST00000308537 COL7A1Q02388 2944 aa15.45■□□□□ 0.06
PDZRN3-202ENST00000308537 NOTOA8MTQ0 251 aa15.44■□□□□ 0.06
PDZRN3-202ENST00000308537 CCL24O00175 119 aa15.44■□□□□ 0.06
PDZRN3-202ENST00000308537 HSPA12AO43301 675 aa15.44■□□□□ 0.06
PDZRN3-202ENST00000308537 DIRAS3O95661 229 aa15.44■□□□□ 0.06
PDZRN3-202ENST00000308537 HOXD3P31249 432 aaPredicted RBP15.44■□□□□ 0.06
PDZRN3-202ENST00000308537 ASPHD1Q5U4P2 390 aa15.44■□□□□ 0.06
PDZRN3-202ENST00000308537 OR51E2Q9H255 320 aa15.44■□□□□ 0.06
PDZRN3-202ENST00000308537 A0A087WXM4 84 aa15.43■□□□□ 0.06
PDZRN3-202ENST00000308537 WI2-2373I1.2A0A1W2PRP0 233 aa15.43■□□□□ 0.06
PDZRN3-202ENST00000308537 OR5H8P0DN80 308 aa15.43■□□□□ 0.06
PDZRN3-202ENST00000308537 MC5RP33032 325 aa15.43■□□□□ 0.06
PDZRN3-202ENST00000308537 CX3CL1P78423 397 aa15.43■□□□□ 0.06
PDZRN3-202ENST00000308537 SSBP2P81877 361 aaPredicted RBP15.43■□□□□ 0.06
PDZRN3-202ENST00000308537 SRSF7Q16629 238 aaKnown RBP eCLIP15.43■□□□□ 0.06
PDZRN3-202ENST00000308537 RNF167Q9H6Y7 350 aa15.43■□□□□ 0.06
PDZRN3-202ENST00000308537 GNB4Q9HAV0 340 aa15.43■□□□□ 0.06
PDZRN3-202ENST00000308537 PARP11Q9NR21 331 aa15.43■□□□□ 0.06
PDZRN3-202ENST00000308537 GAB2Q9UQC2 676 aa15.43■□□□□ 0.06
PDZRN3-202ENST00000308537 A0A075B6Q4 140 aa15.42■□□□□ 0.06
PDZRN3-202ENST00000308537 TRAV41A0A0B4J266 112 aa15.42■□□□□ 0.06
PDZRN3-202ENST00000308537 RBBP9O75884 186 aa15.42■□□□□ 0.06
PDZRN3-202ENST00000308537 SERPINB10P48595 397 aa15.42■□□□□ 0.06
PDZRN3-202ENST00000308537 NEDD8Q15843 81 aa15.42■□□□□ 0.06
PDZRN3-202ENST00000308537 ZNF491Q8N8L2 437 aa15.42■□□□□ 0.06
PDZRN3-202ENST00000308537 C4orf3Q8WVX3 66 aa15.42■□□□□ 0.06
PDZRN3-202ENST00000308537 RNF5Q99942 180 aa15.42■□□□□ 0.06
PDZRN3-202ENST00000308537 SDHAF2Q9NX18 166 aa15.42■□□□□ 0.06
PDZRN3-202ENST00000308537 NUBP2Q9Y5Y2 271 aa15.42■□□□□ 0.06
PDZRN3-202ENST00000308537 I3L521 148 aa15.41■□□□□ 0.06
PDZRN3-202ENST00000308537 IGLV2-23P01705 113 aa15.41■□□□□ 0.06
PDZRN3-202ENST00000308537 TFAP2AP05549 437 aa15.41■□□□□ 0.06
PDZRN3-202ENST00000308537 CLEC2LP0C7M8 214 aa15.41■□□□□ 0.06
PDZRN3-202ENST00000308537 GADD45AP24522 165 aa15.41■□□□□ 0.06
PDZRN3-202ENST00000308537 PSG5Q15238 335 aa15.41■□□□□ 0.06
PDZRN3-202ENST00000308537 ZNF660Q6AZW8 331 aaPredicted RBP15.41■□□□□ 0.06
PDZRN3-202ENST00000308537 SFXN4Q6P4A7 337 aa15.41■□□□□ 0.06
PDZRN3-202ENST00000308537 TPRA1Q86W33 373 aa15.41■□□□□ 0.06
PDZRN3-202ENST00000308537 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.41■□□□□ 0.06
PDZRN3-202ENST00000308537 TSPAN14Q8NG11 270 aa15.41■□□□□ 0.06
PDZRN3-202ENST00000308537 OR8U1Q8NH10 309 aa15.41■□□□□ 0.06
PDZRN3-202ENST00000308537 TPSG1Q9NRR2 321 aa15.41■□□□□ 0.06
PDZRN3-202ENST00000308537 KIAA1456Q9P272 454 aa15.41■□□□□ 0.06
PDZRN3-202ENST00000308537 METTL21EPA6NDL7 271 aa15.4■□□□□ 0.06
PDZRN3-202ENST00000308537 BET1O15155 118 aa15.4■□□□□ 0.06
PDZRN3-202ENST00000308537 OR8U9P0C7N5 309 aa15.4■□□□□ 0.06
PDZRN3-202ENST00000308537 SDC2P34741 201 aa15.4■□□□□ 0.06
PDZRN3-202ENST00000308537 RUNX1Q01196 453 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms