RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 FAM210BQ96KR6 192 aa12.73□□□□□ -0.37
CSDC2-201ENST00000306149 LIN7CQ9NUP9 197 aaKnown RBP12.73□□□□□ -0.37
CSDC2-201ENST00000306149 POLDIP2Q9Y2S7 368 aa12.73□□□□□ -0.37
CSDC2-201ENST00000306149 CLDN34H7C241 214 aa12.72□□□□□ -0.37
CSDC2-201ENST00000306149 CLDN1O95832 211 aa12.72□□□□□ -0.37
CSDC2-201ENST00000306149 HAND1O96004 215 aa12.72□□□□□ -0.37
CSDC2-201ENST00000306149 LRRC75BQ2VPJ9 315 aa12.72□□□□□ -0.37
CSDC2-201ENST00000306149 BTNL3Q6UXE8 466 aa12.72□□□□□ -0.37
CSDC2-201ENST00000306149 OR2D2Q9H210 308 aa12.72□□□□□ -0.37
CSDC2-201ENST00000306149 UFSP2Q9NUQ7 469 aa12.72□□□□□ -0.37
CSDC2-201ENST00000306149 TTC28Q96AY4 2481 aa12.72□□□□□ -0.37
CSDC2-201ENST00000306149 PPP1R2P9O14990 202 aa12.72□□□□□ -0.37
CSDC2-201ENST00000306149 TMEM41BQ5BJD5 291 aa12.72□□□□□ -0.37
CSDC2-201ENST00000306149 C5orf30Q96GV9 206 aa12.72□□□□□ -0.37
CSDC2-201ENST00000306149 FER1L6-AS2Q96M78 137 aa12.72□□□□□ -0.37
CSDC2-201ENST00000306149 MBNL3Q9NUK0 354 aaKnown RBP12.72□□□□□ -0.37
CSDC2-201ENST00000306149 SP9P0CG40 484 aa12.71□□□□□ -0.37
CSDC2-201ENST00000306149 ZNF146Q15072 292 aa12.71□□□□□ -0.37
CSDC2-201ENST00000306149 SPINK9Q5DT21 86 aa12.71□□□□□ -0.37
CSDC2-201ENST00000306149 CNEP1R1Q8N9A8 125 aa12.71□□□□□ -0.37
CSDC2-201ENST00000306149 SDF2L1Q9HCN8 221 aa12.71□□□□□ -0.37
CSDC2-201ENST00000306149 VAX2Q9UIW0 290 aa12.71□□□□□ -0.37
CSDC2-201ENST00000306149 IGHV3-43A0A0B4J1X8 118 aa12.71□□□□□ -0.38
CSDC2-201ENST00000306149 CEBPZOSA8MTT3 80 aa12.71□□□□□ -0.38
CSDC2-201ENST00000306149 C12orf77C9JDV5 145 aa12.71□□□□□ -0.38
CSDC2-201ENST00000306149 SOD3P08294 240 aa12.71□□□□□ -0.38
CSDC2-201ENST00000306149 IGHV3-43DP0DP04 118 aa12.71□□□□□ -0.38
CSDC2-201ENST00000306149 SRSF6Q13247 344 aaKnown RBP12.71□□□□□ -0.38
CSDC2-201ENST00000306149 PMS2P11Q13670 270 aa12.71□□□□□ -0.38
CSDC2-201ENST00000306149 DNLZQ5SXM8 178 aa12.71□□□□□ -0.38
CSDC2-201ENST00000306149 Q6ZR03 302 aa12.71□□□□□ -0.38
CSDC2-201ENST00000306149 MRGPRGQ86SM5 289 aa12.71□□□□□ -0.38
CSDC2-201ENST00000306149 RFESDQ8TAC1 157 aa12.71□□□□□ -0.38
CSDC2-201ENST00000306149 RBKSQ9H477 322 aa12.71□□□□□ -0.38
CSDC2-201ENST00000306149 CLN8Q9UBY8 286 aa12.71□□□□□ -0.38
CSDC2-201ENST00000306149 IFNA1P01562 189 aa12.7□□□□□ -0.38
CSDC2-201ENST00000306149 IGKV1D-33P01593 117 aa12.7□□□□□ -0.38
CSDC2-201ENST00000306149 IGKV1-33P01594 117 aa12.7□□□□□ -0.38
CSDC2-201ENST00000306149 SLC38A11Q08AI6 406 aa12.7□□□□□ -0.38
CSDC2-201ENST00000306149 MRPL49Q13405 166 aaKnown RBP12.7□□□□□ -0.38
CSDC2-201ENST00000306149 PRAMEF6Q5VXH4 476 aa12.7□□□□□ -0.38
CSDC2-201ENST00000306149 Q8IYB0 196 aa12.7□□□□□ -0.38
CSDC2-201ENST00000306149 KLF14Q8TD94 323 aaPredicted RBP12.7□□□□□ -0.38
CSDC2-201ENST00000306149 PINX1Q96BK5 328 aaKnown RBP12.7□□□□□ -0.38
CSDC2-201ENST00000306149 PLPPR2Q96GM1 343 aa12.7□□□□□ -0.38
CSDC2-201ENST00000306149 WDR61Q9GZS3 305 aaKnown RBP12.7□□□□□ -0.38
CSDC2-201ENST00000306149 WIPI2Q9Y4P8 454 aa12.7□□□□□ -0.38
CSDC2-201ENST00000306149 INTS1Q8N201 2190 aaKnown RBP12.7□□□□□ -0.38
CSDC2-201ENST00000306149 TRBV24-1A0A075B6N3 115 aa12.7□□□□□ -0.38
CSDC2-201ENST00000306149 DEFB108AA8MXU0 73 aa12.7□□□□□ -0.38
CSDC2-201ENST00000306149 MLNRO43193 412 aa12.7□□□□□ -0.38
CSDC2-201ENST00000306149 TRGC1P0CF51 173 aa12.7□□□□□ -0.38
CSDC2-201ENST00000306149 RD3LP0DJH9 198 aa12.7□□□□□ -0.38
CSDC2-201ENST00000306149 IL2RGP31785 369 aa12.7□□□□□ -0.38
CSDC2-201ENST00000306149 OR10D4PQ8NGN7 298 aa12.7□□□□□ -0.38
CSDC2-201ENST00000306149 MRGPRDQ8TDS7 321 aa12.7□□□□□ -0.38
CSDC2-201ENST00000306149 TRIB1Q96RU8 372 aa12.7□□□□□ -0.38
CSDC2-201ENST00000306149 SSX3Q99909 188 aa12.7□□□□□ -0.38
CSDC2-201ENST00000306149 CTDSP1Q9GZU7 261 aa12.7□□□□□ -0.38
CSDC2-201ENST00000306149 DCAF16Q9NXF7 216 aa12.7□□□□□ -0.38
CSDC2-201ENST00000306149 METRNQ9UJH8 293 aa12.7□□□□□ -0.38
CSDC2-201ENST00000306149 FAM90A26D6RGX4 464 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 PHOX2AO14813 284 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 PTBP3O95758 552 aaKnown RBP12.69□□□□□ -0.38
CSDC2-201ENST00000306149 OPN1MWP04001 364 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 OPN1MW2P0DN77 364 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 OPN1MW3P0DN78 364 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 MDKP21741 143 aaPredicted RBP12.69□□□□□ -0.38
CSDC2-201ENST00000306149 PDZD11Q5EBL8 140 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 ZNF383Q8NA42 475 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 ABHD5Q8WTS1 349 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 FRZBQ92765 325 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 GALMQ96C23 342 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 MSL2Q9HCI7 577 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 KCNIP1Q9NZI2 227 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 MAP1LC3B2A6NCE7 125 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 C17orf98A8MV24 154 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 S1PR2O95136 353 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 GABRA2P47869 451 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 SOX8P57073 446 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 TNFRSF9Q07011 255 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 LTC4SQ16873 150 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 GFI1BQ5VTD9 330 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 CDPF1Q6NVV7 123 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 TAF15Q92804 592 aaKnown RBP eCLIP12.69□□□□□ -0.38
CSDC2-201ENST00000306149 ZDHHC16Q969W1 377 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 AGMATQ9BSE5 352 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 MAP1LC3BQ9GZQ8 125 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 CEP250Q9BV73 2442 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 HBZP02008 142 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 DEFA4P12838 97 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 RAC2P15153 192 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 FABP6P51161 128 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 BRWD1-AS2P59051 145 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 C4orf17Q53FE4 359 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 RPP25LQ8N5L8 163 aaKnown RBP12.69□□□□□ -0.38
CSDC2-201ENST00000306149 GMPPAQ96IJ6 420 aaPredicted RBP12.69□□□□□ -0.38
CSDC2-201ENST00000306149 PFDN5Q99471 154 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 DCTN5Q9BTE1 182 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 GPR61Q9BZJ8 451 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms