RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 IGHG4P01861 327 aa20.75■□□□□ 0.91
CDKN2A-201ENST00000304494 THBS3P49746 956 aa20.75■□□□□ 0.91
CDKN2A-201ENST00000304494 SRSF7Q16629 238 aaKnown RBP eCLIP20.75■□□□□ 0.91
CDKN2A-201ENST00000304494 C8orf86Q6ZUL3 223 aa20.75■□□□□ 0.91
CDKN2A-201ENST00000304494 LINC00482Q8N8I6 264 aa20.75■□□□□ 0.91
CDKN2A-201ENST00000304494 RNF152Q8N8N0 203 aa20.75■□□□□ 0.91
CDKN2A-201ENST00000304494 OR10J5Q8NHC4 309 aa20.75■□□□□ 0.91
CDKN2A-201ENST00000304494 CABLES2Q9BTV7 478 aa20.75■□□□□ 0.91
CDKN2A-201ENST00000304494 OR51E2Q9H255 320 aa20.75■□□□□ 0.91
CDKN2A-201ENST00000304494 OR51J1Q9H342 316 aa20.75■□□□□ 0.91
CDKN2A-201ENST00000304494 DAPK2Q9UIK4 370 aa20.75■□□□□ 0.91
CDKN2A-201ENST00000304494 RNF150Q9ULK6 438 aa20.75■□□□□ 0.91
CDKN2A-201ENST00000304494 BET1O15155 118 aa20.74■□□□□ 0.91
CDKN2A-201ENST00000304494 RPLP1P05386 114 aaKnown RBP20.74■□□□□ 0.91
CDKN2A-201ENST00000304494 GSTP1P09211 210 aaKnown RBP20.74■□□□□ 0.91
CDKN2A-201ENST00000304494 MYCNOSP40205 109 aa20.74■□□□□ 0.91
CDKN2A-201ENST00000304494 NEDD8Q15843 81 aa20.74■□□□□ 0.91
CDKN2A-201ENST00000304494 GLDNQ6ZMI3 551 aaPredicted RBP20.74■□□□□ 0.91
CDKN2A-201ENST00000304494 ETV3LQ6ZN32 361 aa20.74■□□□□ 0.91
CDKN2A-201ENST00000304494 ZNF436-AS1Q8NC38 126 aaPredicted RBP20.74■□□□□ 0.91
CDKN2A-201ENST00000304494 RNF5Q99942 180 aa20.74■□□□□ 0.91
CDKN2A-201ENST00000304494 SCGNO76038 276 aa20.73■□□□□ 0.91
CDKN2A-201ENST00000304494 GSTT2P0CG29 244 aa20.73■□□□□ 0.91
CDKN2A-201ENST00000304494 GSTT2BP0CG30 244 aa20.73■□□□□ 0.91
CDKN2A-201ENST00000304494 IGSF11Q5DX21 431 aa20.73■□□□□ 0.91
CDKN2A-201ENST00000304494 SFXN4Q6P4A7 337 aa20.73■□□□□ 0.91
CDKN2A-201ENST00000304494 C18orf65Q6ZTR6 163 aa20.73■□□□□ 0.91
CDKN2A-201ENST00000304494 MRPL41Q8IXM3 137 aaKnown RBP20.73■□□□□ 0.91
CDKN2A-201ENST00000304494 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.73■□□□□ 0.91
CDKN2A-201ENST00000304494 TRBV6-7A0A0A0MS04 114 aa20.72■□□□□ 0.91
CDKN2A-201ENST00000304494 IGHV7-81A0A0B4J1V7 117 aa20.72■□□□□ 0.91
CDKN2A-201ENST00000304494 RRHO14718 337 aa20.72■□□□□ 0.91
CDKN2A-201ENST00000304494 SDC2P34741 201 aa20.72■□□□□ 0.91
CDKN2A-201ENST00000304494 CDX1P47902 265 aaPredicted RBP20.72■□□□□ 0.91
CDKN2A-201ENST00000304494 PLGLAQ15195 96 aa20.72■□□□□ 0.91
CDKN2A-201ENST00000304494 FOXB2Q5VYV0 432 aa20.72■□□□□ 0.91
CDKN2A-201ENST00000304494 Q6ZS49 121 aa20.72■□□□□ 0.91
CDKN2A-201ENST00000304494 GPR61Q9BZJ8 451 aa20.72■□□□□ 0.91
CDKN2A-201ENST00000304494 PARP11Q9NR21 331 aa20.72■□□□□ 0.91
CDKN2A-201ENST00000304494 ZNF230Q9UIE0 474 aaPredicted RBP20.72■□□□□ 0.91
CDKN2A-201ENST00000304494 LOC100506127A0A0U1RQW1 187 aa20.71■□□□□ 0.91
CDKN2A-201ENST00000304494 ATP6V0E1O15342 81 aa20.71■□□□□ 0.91
CDKN2A-201ENST00000304494 PROP1O75360 226 aa20.71■□□□□ 0.91
CDKN2A-201ENST00000304494 APOA2P02652 100 aa20.71■□□□□ 0.91
CDKN2A-201ENST00000304494 PRB2P02812 416 aaPredicted RBP20.71■□□□□ 0.91
CDKN2A-201ENST00000304494 TFAP2AP05549 437 aa20.71■□□□□ 0.91
CDKN2A-201ENST00000304494 CD36P16671 472 aa20.71■□□□□ 0.91
CDKN2A-201ENST00000304494 DTYMKP23919 212 aa20.71■□□□□ 0.91
CDKN2A-201ENST00000304494 CDNFQ49AH0 187 aa20.71■□□□□ 0.91
CDKN2A-201ENST00000304494 DRAXINQ8NBI3 349 aaPredicted RBP20.71■□□□□ 0.91
CDKN2A-201ENST00000304494 MAFIPQ8WZ33 124 aa20.71■□□□□ 0.91
CDKN2A-201ENST00000304494 PSMB8P28062 276 aa20.7■□□□□ 0.9
CDKN2A-201ENST00000304494 MXD1Q05195 221 aa20.7■□□□□ 0.9
CDKN2A-201ENST00000304494 ZNF660Q6AZW8 331 aaPredicted RBP20.7■□□□□ 0.9
CDKN2A-201ENST00000304494 PDPNQ86YL7 162 aa20.7■□□□□ 0.9
CDKN2A-201ENST00000304494 OR8U1Q8NH10 309 aa20.7■□□□□ 0.9
CDKN2A-201ENST00000304494 GINS4Q9BRT9 223 aa20.7■□□□□ 0.9
CDKN2A-201ENST00000304494 FBXL15Q9H469 300 aa20.7■□□□□ 0.9
CDKN2A-201ENST00000304494 GAB2Q9UQC2 676 aa20.7■□□□□ 0.9
CDKN2A-201ENST00000304494 TRAV41A0A0B4J266 112 aa20.69■□□□□ 0.9
CDKN2A-201ENST00000304494 M0R1X1 148 aa20.69■□□□□ 0.9
CDKN2A-201ENST00000304494 OR8U9P0C7N5 309 aa20.69■□□□□ 0.9
CDKN2A-201ENST00000304494 SNRPBP14678 240 aaKnown RBP20.69■□□□□ 0.9
CDKN2A-201ENST00000304494 SCAND1P57086 179 aa20.69■□□□□ 0.9
CDKN2A-201ENST00000304494 PITPNAQ00169 270 aa20.69■□□□□ 0.9
CDKN2A-201ENST00000304494 HACD4Q5VWC8 232 aa20.69■□□□□ 0.9
CDKN2A-201ENST00000304494 TMEM65Q6PI78 240 aa20.69■□□□□ 0.9
CDKN2A-201ENST00000304494 LCNL1Q6ZST4 164 aa20.69■□□□□ 0.9
CDKN2A-201ENST00000304494 ZNF383Q8NA42 475 aa20.69■□□□□ 0.9
CDKN2A-201ENST00000304494 LGALS14Q8TCE9 139 aa20.69■□□□□ 0.9
CDKN2A-201ENST00000304494 P2RX4Q99571 388 aa20.69■□□□□ 0.9
CDKN2A-201ENST00000304494 TSNAXQ99598 290 aaKnown RBP20.69■□□□□ 0.9
CDKN2A-201ENST00000304494 MCRIP2Q9BUT9 160 aaKnown RBP20.69■□□□□ 0.9
CDKN2A-201ENST00000304494 OR2D2Q9H210 308 aa20.69■□□□□ 0.9
CDKN2A-201ENST00000304494 WSB1Q9Y6I7 421 aa20.69■□□□□ 0.9
CDKN2A-201ENST00000304494 CCL24O00175 119 aa20.68■□□□□ 0.9
CDKN2A-201ENST00000304494 SPDEFO95238 335 aa20.68■□□□□ 0.9
CDKN2A-201ENST00000304494 PPIFP30405 207 aaKnown RBP20.68■□□□□ 0.9
CDKN2A-201ENST00000304494 AURKAIP1Q9NWT8 199 aaPredicted RBP20.68■□□□□ 0.9
CDKN2A-201ENST00000304494 RBM7Q9Y580 266 aaKnown RBP20.68■□□□□ 0.9
CDKN2A-201ENST00000304494 DNAH3Q8TD57 4116 aa20.68■□□□□ 0.9
CDKN2A-201ENST00000304494 G3V318 75 aa20.67■□□□□ 0.9
CDKN2A-201ENST00000304494 IGKV1-16P04430 117 aa20.67■□□□□ 0.9
CDKN2A-201ENST00000304494 TIMM50Q3ZCQ8 353 aa20.67■□□□□ 0.9
CDKN2A-201ENST00000304494 C4orf3Q8WVX3 66 aa20.67■□□□□ 0.9
CDKN2A-201ENST00000304494 DPF1Q92782 380 aa20.67■□□□□ 0.9
CDKN2A-201ENST00000304494 RAX2Q96IS3 184 aa20.67■□□□□ 0.9
CDKN2A-201ENST00000304494 DCSTAMPQ9H295 470 aa20.67■□□□□ 0.9
CDKN2A-201ENST00000304494 RNF167Q9H6Y7 350 aa20.67■□□□□ 0.9
CDKN2A-201ENST00000304494 VCX3AQ9NNX9 186 aa20.67■□□□□ 0.9
CDKN2A-201ENST00000304494 RHBDL2Q9NX52 303 aa20.67■□□□□ 0.9
CDKN2A-201ENST00000304494 ELF5Q9UKW6 265 aaPredicted RBP20.67■□□□□ 0.9
CDKN2A-201ENST00000304494 ETV7Q9Y603 341 aa20.67■□□□□ 0.9
CDKN2A-201ENST00000304494 NOTCH3Q9UM47 2321 aa20.67■□□□□ 0.9
CDKN2A-201ENST00000304494 IGLV1-40P01703 118 aa20.66■□□□□ 0.9
CDKN2A-201ENST00000304494 CRIP2P52943 208 aaPredicted RBP20.66■□□□□ 0.9
CDKN2A-201ENST00000304494 RPS16P62249 146 aaKnown RBP20.66■□□□□ 0.9
CDKN2A-201ENST00000304494 CX3CL1P78423 397 aa20.66■□□□□ 0.9
CDKN2A-201ENST00000304494 PSG5Q15238 335 aa20.66■□□□□ 0.9
CDKN2A-201ENST00000304494 FLYWCH2Q96CP2 140 aaKnown RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms