RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 VPREB3Q9UKI3 123 aa19.69■□□□□ 0.74
HOXC9-201ENST00000303450 IGKV1D-13A0A0B4J2D9 117 aa19.68■□□□□ 0.74
HOXC9-201ENST00000303450 TRIM77I1YAP6 450 aa19.68■□□□□ 0.74
HOXC9-201ENST00000303450 IGKV1-13P0DP09 117 aa19.68■□□□□ 0.74
HOXC9-201ENST00000303450 CD24P25063 80 aa19.68■□□□□ 0.74
HOXC9-201ENST00000303450 FXYD4P59646 89 aa19.68■□□□□ 0.74
HOXC9-201ENST00000303450 SRSF2Q01130 221 aaKnown RBP19.68■□□□□ 0.74
HOXC9-201ENST00000303450 STEAP1BQ6NZ63 245 aa19.68■□□□□ 0.74
HOXC9-201ENST00000303450 GDPD1Q8N9F7 314 aa19.68■□□□□ 0.74
HOXC9-201ENST00000303450 CAPSLQ8WWF8 208 aa19.68■□□□□ 0.74
HOXC9-201ENST00000303450 MRPL20Q9BYC9 149 aaKnown RBP19.68■□□□□ 0.74
HOXC9-201ENST00000303450 TINAGL1Q9GZM7 467 aaPredicted RBP19.68■□□□□ 0.74
HOXC9-201ENST00000303450 GAB2Q9UQC2 676 aa19.68■□□□□ 0.74
HOXC9-201ENST00000303450 SLC22A5O76082 557 aa19.67■□□□□ 0.74
HOXC9-201ENST00000303450 RAB3DO95716 219 aa19.67■□□□□ 0.74
HOXC9-201ENST00000303450 CD74P04233 296 aa19.67■□□□□ 0.74
HOXC9-201ENST00000303450 ZNF660Q6AZW8 331 aaPredicted RBP19.67■□□□□ 0.74
HOXC9-201ENST00000303450 TMEM17Q86X19 198 aa19.67■□□□□ 0.74
HOXC9-201ENST00000303450 ZNF645Q8N7E2 425 aa19.67■□□□□ 0.74
HOXC9-201ENST00000303450 SECTM1Q8WVN6 248 aa19.67■□□□□ 0.74
HOXC9-201ENST00000303450 CFHR4Q92496 578 aa19.67■□□□□ 0.74
HOXC9-201ENST00000303450 SDHAF2Q9NX18 166 aa19.67■□□□□ 0.74
HOXC9-201ENST00000303450 PITPNC1Q9UKF7 332 aa19.67■□□□□ 0.74
HOXC9-201ENST00000303450 TCF19Q9Y242 345 aa19.67■□□□□ 0.74
HOXC9-201ENST00000303450 IGHV3-72A0A0B4J1Y9 119 aa19.66■□□□□ 0.74
HOXC9-201ENST00000303450 RNASE1P07998 156 aaKnown RBP19.66■□□□□ 0.74
HOXC9-201ENST00000303450 FAM106CPP0CH98 169 aa19.66■□□□□ 0.74
HOXC9-201ENST00000303450 RIPPLY3P57055 190 aa19.66■□□□□ 0.74
HOXC9-201ENST00000303450 ANKRD20A5PA0PJZ0 165 aa19.66■□□□□ 0.74
HOXC9-201ENST00000303450 M0R1X1 148 aa19.66■□□□□ 0.74
HOXC9-201ENST00000303450 PROP1O75360 226 aa19.66■□□□□ 0.74
HOXC9-201ENST00000303450 SNRNP70P08621 437 aaKnown RBP19.66■□□□□ 0.74
HOXC9-201ENST00000303450 AKAIN1P0CW23 69 aa19.66■□□□□ 0.74
HOXC9-201ENST00000303450 HES1Q14469 280 aa19.66■□□□□ 0.74
HOXC9-201ENST00000303450 HABP2Q14520 560 aaPredicted RBP19.66■□□□□ 0.74
HOXC9-201ENST00000303450 MEF2DQ14814 521 aa19.66■□□□□ 0.74
HOXC9-201ENST00000303450 C16orf87Q6PH81 154 aa19.66■□□□□ 0.74
HOXC9-201ENST00000303450 MFSD4AQ8N468 514 aa19.66■□□□□ 0.74
HOXC9-201ENST00000303450 OR4D10Q8NGI6 311 aa19.66■□□□□ 0.74
HOXC9-201ENST00000303450 S100ZQ8WXG8 99 aa19.66■□□□□ 0.74
HOXC9-201ENST00000303450 TRIM63Q969Q1 353 aa19.66■□□□□ 0.74
HOXC9-201ENST00000303450 NABP2Q9BQ15 211 aa19.66■□□□□ 0.74
HOXC9-201ENST00000303450 SLC5A7Q9GZV3 580 aa19.66■□□□□ 0.74
HOXC9-201ENST00000303450 AKIP1Q9NQ31 210 aa19.66■□□□□ 0.74
HOXC9-201ENST00000303450 CT45A6P0DMU7 189 aa19.65■□□□□ 0.74
HOXC9-201ENST00000303450 CT45A5P0DMU8 189 aa19.65■□□□□ 0.74
HOXC9-201ENST00000303450 CT45A7P0DMV0 189 aa19.65■□□□□ 0.74
HOXC9-201ENST00000303450 CD1BP29016 333 aa19.65■□□□□ 0.74
HOXC9-201ENST00000303450 LSAMPQ13449 338 aa19.65■□□□□ 0.74
HOXC9-201ENST00000303450 THNSL2Q86YJ6 484 aa19.65■□□□□ 0.74
HOXC9-201ENST00000303450 ARRDC1Q8N5I2 433 aa19.65■□□□□ 0.74
HOXC9-201ENST00000303450 DRAXINQ8NBI3 349 aaPredicted RBP19.65■□□□□ 0.74
HOXC9-201ENST00000303450 MOB3AQ96BX8 217 aa19.65■□□□□ 0.74
HOXC9-201ENST00000303450 FAM90A9PA6NNJ1 464 aa19.64■□□□□ 0.73
HOXC9-201ENST00000303450 IGKV1D-33P01593 117 aa19.64■□□□□ 0.73
HOXC9-201ENST00000303450 IGKV1-33P01594 117 aa19.64■□□□□ 0.73
HOXC9-201ENST00000303450 AMY2AP04746 511 aa19.64■□□□□ 0.73
HOXC9-201ENST00000303450 AP3S2P59780 193 aa19.64■□□□□ 0.73
HOXC9-201ENST00000303450 TOMM5Q8N4H5 51 aa19.64■□□□□ 0.73
HOXC9-201ENST00000303450 A6NDX4 124 aa19.63■□□□□ 0.73
HOXC9-201ENST00000303450 TRIQKQ629K1 86 aa19.63■□□□□ 0.73
HOXC9-201ENST00000303450 FAAP20Q6NZ36 180 aa19.63■□□□□ 0.73
HOXC9-201ENST00000303450 GLDNQ6ZMI3 551 aaPredicted RBP19.63■□□□□ 0.73
HOXC9-201ENST00000303450 LIAT1Q6ZQX7 453 aa19.63■□□□□ 0.73
HOXC9-201ENST00000303450 TMEM219Q86XT9 240 aa19.63■□□□□ 0.73
HOXC9-201ENST00000303450 C5orf30Q96GV9 206 aa19.63■□□□□ 0.73
HOXC9-201ENST00000303450 CCL28Q9NRJ3 127 aa19.63■□□□□ 0.73
HOXC9-201ENST00000303450 DISC1C4P0D8 188 aa19.62■□□□□ 0.73
HOXC9-201ENST00000303450 GPR137BO60478 399 aa19.62■□□□□ 0.73
HOXC9-201ENST00000303450 INPP1P49441 399 aa19.62■□□□□ 0.73
HOXC9-201ENST00000303450 BAK1Q16611 211 aa19.62■□□□□ 0.73
HOXC9-201ENST00000303450 CCBE1Q6UXH8 406 aaPredicted RBP19.62■□□□□ 0.73
HOXC9-201ENST00000303450 OR4C16Q8NGL9 310 aa19.62■□□□□ 0.73
HOXC9-201ENST00000303450 ZFAND2BQ8WV99 257 aa19.62■□□□□ 0.73
HOXC9-201ENST00000303450 SDHCQ99643 169 aaPredicted RBP19.62■□□□□ 0.73
HOXC9-201ENST00000303450 RAB18Q9NP72 206 aa19.62■□□□□ 0.73
HOXC9-201ENST00000303450 OR5H14A6NHG9 310 aa19.61■□□□□ 0.73
HOXC9-201ENST00000303450 IGLV2-14P01704 120 aa19.61■□□□□ 0.73
HOXC9-201ENST00000303450 TMEM11P17152 192 aa19.61■□□□□ 0.73
HOXC9-201ENST00000303450 HNF4GQ14541 408 aa19.61■□□□□ 0.73
HOXC9-201ENST00000303450 SCGB2B2Q4G0G5 96 aa19.61■□□□□ 0.73
HOXC9-201ENST00000303450 ZNF57Q68EA5 555 aaPredicted RBP19.61■□□□□ 0.73
HOXC9-201ENST00000303450 OR2T10Q8NGZ9 312 aa19.61■□□□□ 0.73
HOXC9-201ENST00000303450 FAM181BA6NEQ2 426 aa19.61■□□□□ 0.73
HOXC9-201ENST00000303450 MC5RP33032 325 aa19.61■□□□□ 0.73
HOXC9-201ENST00000303450 FAUP35544 74 aaKnown RBP19.61■□□□□ 0.73
HOXC9-201ENST00000303450 LINC00205P59089 165 aa19.61■□□□□ 0.73
HOXC9-201ENST00000303450 KLF9Q13886 244 aaPredicted RBP19.61■□□□□ 0.73
HOXC9-201ENST00000303450 MSMO1Q15800 293 aa19.61■□□□□ 0.73
HOXC9-201ENST00000303450 ZNF383Q8NA42 475 aa19.61■□□□□ 0.73
HOXC9-201ENST00000303450 ZBTB34Q8NCN2 500 aa19.61■□□□□ 0.73
HOXC9-201ENST00000303450 OR5AN1Q8NGI8 311 aa19.61■□□□□ 0.73
HOXC9-201ENST00000303450 BORCS5Q969J3 196 aa19.61■□□□□ 0.73
HOXC9-201ENST00000303450 FXYD6Q9H0Q3 95 aa19.61■□□□□ 0.73
HOXC9-201ENST00000303450 MCUBQ9NWR8 336 aa19.61■□□□□ 0.73
HOXC9-201ENST00000303450 H0YJW9 148 aa19.6■□□□□ 0.73
HOXC9-201ENST00000303450 H7C2Y5 167 aa19.6■□□□□ 0.73
HOXC9-201ENST00000303450 MOSP00540 346 aa19.6■□□□□ 0.73
HOXC9-201ENST00000303450 CRYBA1P05813 215 aa19.6■□□□□ 0.73
HOXC9-201ENST00000303450 DUTP33316 252 aaKnown RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms