RNA–Protein interactions for RNA: ENST00000298454.3

VSTM4-201, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VSTM4, Length 2,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-201ENST00000298454 UQCRFS1P47985 274 aa18.81■□□□□ 0.6
VSTM4-201ENST00000298454 GFOD1Q9NXC2 390 aa18.81■□□□□ 0.6
VSTM4-201ENST00000298454 ANKHD1Q8IWZ3 2542 aaKnown RBP18.81■□□□□ 0.6
VSTM4-201ENST00000298454 TPRP12270 2363 aaKnown RBP18.81■□□□□ 0.6
VSTM4-201ENST00000298454 S1PR2O95136 353 aa18.81■□□□□ 0.6
VSTM4-201ENST00000298454 EWSR1Q01844 656 aaKnown RBP eCLIP18.81■□□□□ 0.6
VSTM4-201ENST00000298454 AANATQ16613 207 aa18.81■□□□□ 0.6
VSTM4-201ENST00000298454 LYPD2Q6UXB3 125 aa18.81■□□□□ 0.6
VSTM4-201ENST00000298454 ZNF66Q6ZN08 573 aa18.81■□□□□ 0.6
VSTM4-201ENST00000298454 REG4Q9BYZ8 158 aa18.81■□□□□ 0.6
VSTM4-201ENST00000298454 IFI27L2Q9H2X8 130 aa18.81■□□□□ 0.6
VSTM4-201ENST00000298454 WFDC1Q9HC57 220 aa18.81■□□□□ 0.6
VSTM4-201ENST00000298454 IGHV1-69-2A0A0G2JMI3 117 aa18.8■□□□□ 0.6
VSTM4-201ENST00000298454 VAMP2P63027 116 aa18.8■□□□□ 0.6
VSTM4-201ENST00000298454 HSD17B10Q99714 261 aaKnown RBP18.8■□□□□ 0.6
VSTM4-201ENST00000298454 TMEM204Q9BSN7 226 aa18.8■□□□□ 0.6
VSTM4-201ENST00000298454 A0A1W2PPE3 182 aa18.79■□□□□ 0.6
VSTM4-201ENST00000298454 IGSF23A1L1A6 192 aa18.79■□□□□ 0.6
VSTM4-201ENST00000298454 WRBO00258 174 aa18.79■□□□□ 0.6
VSTM4-201ENST00000298454 MMP23AO75900 390 aa18.79■□□□□ 0.6
VSTM4-201ENST00000298454 KRASP01116 189 aa18.79■□□□□ 0.6
VSTM4-201ENST00000298454 G6PCP35575 357 aa18.79■□□□□ 0.6
VSTM4-201ENST00000298454 RPL39P5Q59GN2 51 aa18.79■□□□□ 0.6
VSTM4-201ENST00000298454 CORO2AQ92828 525 aa18.79■□□□□ 0.6
VSTM4-201ENST00000298454 BARX1Q9HBU1 254 aaPredicted RBP18.79■□□□□ 0.6
VSTM4-201ENST00000298454 LYRM2Q9NU23 88 aaPredicted RBP18.79■□□□□ 0.6
VSTM4-201ENST00000298454 MED9Q9NWA0 146 aa18.79■□□□□ 0.6
VSTM4-201ENST00000298454 PFDN2Q9UHV9 154 aa18.79■□□□□ 0.6
VSTM4-201ENST00000298454 ARFGEF3Q5TH69 2177 aa18.79■□□□□ 0.6
VSTM4-201ENST00000298454 TNFRSF13BO14836 293 aaPredicted RBP18.79■□□□□ 0.6
VSTM4-201ENST00000298454 JTBO76095 146 aa18.79■□□□□ 0.6
VSTM4-201ENST00000298454 GAPDHP04406 335 aaKnown RBP18.79■□□□□ 0.6
VSTM4-201ENST00000298454 NFYBP25208 207 aa18.79■□□□□ 0.6
VSTM4-201ENST00000298454 RAB9BQ9NP90 201 aa18.79■□□□□ 0.6
VSTM4-201ENST00000298454 C19orf12Q9NSK7 152 aa18.79■□□□□ 0.6
VSTM4-201ENST00000298454 DSCAML1Q8TD84 2053 aa18.78■□□□□ 0.6
VSTM4-201ENST00000298454 ZNF729A6NN14 1252 aaPredicted RBP18.78■□□□□ 0.6
VSTM4-201ENST00000298454 DUTP33316 252 aaKnown RBP18.78■□□□□ 0.6
VSTM4-201ENST00000298454 PAX9P55771 341 aa18.78■□□□□ 0.6
VSTM4-201ENST00000298454 CT45A1Q5HYN5 189 aa18.78■□□□□ 0.6
VSTM4-201ENST00000298454 NCR3LG1Q68D85 454 aa18.78■□□□□ 0.6
VSTM4-201ENST00000298454 CT45A3Q8NHU0 189 aa18.78■□□□□ 0.6
VSTM4-201ENST00000298454 IDI2-AS1Q9NZ38 188 aa18.78■□□□□ 0.6
VSTM4-201ENST00000298454 MMP24Q9Y5R2 645 aa18.78■□□□□ 0.6
VSTM4-201ENST00000298454 hADV38S2A0JD32 116 aa18.78■□□□□ 0.6
VSTM4-201ENST00000298454 MFSD2BA6NFX1 497 aa18.78■□□□□ 0.6
VSTM4-201ENST00000298454 I3L521 148 aa18.78■□□□□ 0.6
VSTM4-201ENST00000298454 GNLYP22749 145 aa18.78■□□□□ 0.6
VSTM4-201ENST00000298454 ERVFRD-1P60508 538 aa18.78■□□□□ 0.6
VSTM4-201ENST00000298454 EIF5AP63241 154 aaKnown RBP18.78■□□□□ 0.6
VSTM4-201ENST00000298454 ZNF273Q14593 569 aa18.78■□□□□ 0.6
VSTM4-201ENST00000298454 TOR2AQ5JU69 321 aa18.78■□□□□ 0.6
VSTM4-201ENST00000298454 C1orf229Q6ZS94 237 aaPredicted RBP18.78■□□□□ 0.6
VSTM4-201ENST00000298454 ODF3L1Q8IXM7 274 aa18.78■□□□□ 0.6
VSTM4-201ENST00000298454 TMEM252Q8N6L7 170 aa18.78■□□□□ 0.6
VSTM4-201ENST00000298454 ABHD14AQ9BUJ0 271 aa18.78■□□□□ 0.6
VSTM4-201ENST00000298454 LYNX1G3V0Z9 82 aa18.77■□□□□ 0.6
VSTM4-201ENST00000298454 LYNX1P0DP58 116 aa18.77■□□□□ 0.6
VSTM4-201ENST00000298454 PRAMEF5Q5TYX0 476 aa18.77■□□□□ 0.6
VSTM4-201ENST00000298454 ZNF295-AS1Q8N0V1 137 aa18.77■□□□□ 0.6
VSTM4-201ENST00000298454 FAM216AQ8WUB2 273 aa18.77■□□□□ 0.6
VSTM4-201ENST00000298454 LINC00574Q9H8X3 128 aa18.77■□□□□ 0.6
VSTM4-201ENST00000298454 CTSZQ9UBR2 303 aa18.77■□□□□ 0.6
VSTM4-201ENST00000298454 M0R1X1 148 aa18.76■□□□□ 0.59
VSTM4-201ENST00000298454 ZG16O60844 167 aa18.76■□□□□ 0.59
VSTM4-201ENST00000298454 FBXO24O75426 580 aa18.76■□□□□ 0.59
VSTM4-201ENST00000298454 MMP9P14780 707 aa18.76■□□□□ 0.59
VSTM4-201ENST00000298454 RPL31P62899 125 aaKnown RBP18.76■□□□□ 0.59
VSTM4-201ENST00000298454 UBAC2Q8NBM4 344 aa18.76■□□□□ 0.59
VSTM4-201ENST00000298454 LINC00312Q9Y6C7 94 aa18.76■□□□□ 0.59
VSTM4-201ENST00000298454 TANC2Q9HCD6 1990 aa18.76■□□□□ 0.59
VSTM4-201ENST00000298454 FGF16O43320 207 aa18.76■□□□□ 0.59
VSTM4-201ENST00000298454 FAM157CP0CG43 387 aa18.76■□□□□ 0.59
VSTM4-201ENST00000298454 HFEQ30201 348 aa18.76■□□□□ 0.59
VSTM4-201ENST00000298454 TCTEX1D1Q8N7M0 179 aa18.76■□□□□ 0.59
VSTM4-201ENST00000298454 RNF141Q8WVD5 230 aa18.76■□□□□ 0.59
VSTM4-201ENST00000298454 FAM122AQ96E09 287 aa18.76■□□□□ 0.59
VSTM4-201ENST00000298454 USF3Q68DE3 2245 aa18.75■□□□□ 0.59
VSTM4-201ENST00000298454 P0C879 139 aa18.75■□□□□ 0.59
VSTM4-201ENST00000298454 FAM212BQ9NTI7 297 aaPredicted RBP18.75■□□□□ 0.59
VSTM4-201ENST00000298454 H3BP45 60 aa18.75■□□□□ 0.59
VSTM4-201ENST00000298454 ITGB1BP1O14713 200 aa18.75■□□□□ 0.59
VSTM4-201ENST00000298454 COL8A2P25067 703 aa18.75■□□□□ 0.59
VSTM4-201ENST00000298454 GNG10P50151 68 aa18.75■□□□□ 0.59
VSTM4-201ENST00000298454 SLC25A31Q9H0C2 315 aa18.75■□□□□ 0.59
VSTM4-201ENST00000298454 DVL1O14640 695 aa18.74■□□□□ 0.59
VSTM4-201ENST00000298454 NDUFB3O43676 98 aa18.74■□□□□ 0.59
VSTM4-201ENST00000298454 CST7O76096 145 aa18.74■□□□□ 0.59
VSTM4-201ENST00000298454 CCL3L1P16619 93 aa18.74■□□□□ 0.59
VSTM4-201ENST00000298454 RAB7AP51149 207 aa18.74■□□□□ 0.59
VSTM4-201ENST00000298454 MEF2CQ06413 473 aaPredicted RBP18.74■□□□□ 0.59
VSTM4-201ENST00000298454 CLINT1Q14677 625 aa18.74■□□□□ 0.59
VSTM4-201ENST00000298454 ZNF439Q8NDP4 499 aa18.74■□□□□ 0.59
VSTM4-201ENST00000298454 H1FXQ92522 213 aaKnown RBP18.74■□□□□ 0.59
VSTM4-201ENST00000298454 PLA2G2EQ9NZK7 142 aa18.74■□□□□ 0.59
VSTM4-201ENST00000298454 SYNGR2O43760 224 aa18.74■□□□□ 0.59
VSTM4-201ENST00000298454 FCGR3BO75015 233 aa18.74■□□□□ 0.59
VSTM4-201ENST00000298454 IAPPP10997 89 aa18.74■□□□□ 0.59
VSTM4-201ENST00000298454 C4orf17Q53FE4 359 aa18.74■□□□□ 0.59
VSTM4-201ENST00000298454 LRRC10Q5BKY1 277 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms