RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 UCP1P25874 307 aa20.09■□□□□ 0.81
GTF2A1-201ENST00000298173 DLX1P56177 255 aa20.09■□□□□ 0.81
GTF2A1-201ENST00000298173 RPL30P62888 115 aaKnown RBP20.09■□□□□ 0.81
GTF2A1-201ENST00000298173 RPL39P5Q59GN2 51 aa20.09■□□□□ 0.81
GTF2A1-201ENST00000298173 LIAT1Q6ZQX7 453 aa20.09■□□□□ 0.81
GTF2A1-201ENST00000298173 KRTAP1-3Q8IUG1 177 aa20.09■□□□□ 0.81
GTF2A1-201ENST00000298173 LYG1Q8N1E2 194 aa20.09■□□□□ 0.81
GTF2A1-201ENST00000298173 TNFRSF14Q92956 283 aa20.09■□□□□ 0.81
GTF2A1-201ENST00000298173 SAA2-SAA4A0A096LPE2 208 aa20.08■□□□□ 0.81
GTF2A1-201ENST00000298173 IGHV2-26A0A0B4J1V2 119 aa20.08■□□□□ 0.81
GTF2A1-201ENST00000298173 IGLV1-47P01700 117 aa20.08■□□□□ 0.81
GTF2A1-201ENST00000298173 SAA2P0DJI9 122 aaPredicted RBP20.08■□□□□ 0.81
GTF2A1-201ENST00000298173 DUTP33316 252 aaKnown RBP20.08■□□□□ 0.81
GTF2A1-201ENST00000298173 BTNL3Q6UXE8 466 aa20.08■□□□□ 0.81
GTF2A1-201ENST00000298173 OR51H1Q8NH63 302 aa20.08■□□□□ 0.81
GTF2A1-201ENST00000298173 C1orf159Q96HA4 380 aa20.08■□□□□ 0.81
GTF2A1-201ENST00000298173 TMEM56Q96MV1 263 aa20.08■□□□□ 0.81
GTF2A1-201ENST00000298173 HSD17B10Q99714 261 aaKnown RBP20.08■□□□□ 0.81
GTF2A1-201ENST00000298173 SIRPDQ9H106 197 aa20.08■□□□□ 0.81
GTF2A1-201ENST00000298173 MGAT4CQ9UBM8 478 aa20.08■□□□□ 0.81
GTF2A1-201ENST00000298173 TMEM56-RWDD3S4R434 201 aa20.08■□□□□ 0.81
GTF2A1-201ENST00000298173 CDS2O95674 445 aa20.07■□□□□ 0.8
GTF2A1-201ENST00000298173 BRWD1-AS2P59051 145 aa20.07■□□□□ 0.8
GTF2A1-201ENST00000298173 LHFPL5Q8TAF8 219 aa20.07■□□□□ 0.8
GTF2A1-201ENST00000298173 LINC00473A8K010 186 aa20.07■□□□□ 0.8
GTF2A1-201ENST00000298173 RNF212BA8MTL3 300 aa20.07■□□□□ 0.8
GTF2A1-201ENST00000298173 LINC00205P59089 165 aa20.07■□□□□ 0.8
GTF2A1-201ENST00000298173 CD83Q01151 205 aa20.07■□□□□ 0.8
GTF2A1-201ENST00000298173 Q5PR19 223 aa20.07■□□□□ 0.8
GTF2A1-201ENST00000298173 CLEC7AQ9BXN2 247 aa20.07■□□□□ 0.8
GTF2A1-201ENST00000298173 RANGRFQ9HD47 186 aaPredicted RBP20.07■□□□□ 0.8
GTF2A1-201ENST00000298173 UNC79Q9P2D8 2635 aa20.06■□□□□ 0.8
GTF2A1-201ENST00000298173 A8MV72 311 aaPredicted RBP20.06■□□□□ 0.8
GTF2A1-201ENST00000298173 OR2A4O95047 310 aa20.06■□□□□ 0.8
GTF2A1-201ENST00000298173 MMP9P14780 707 aa20.06■□□□□ 0.8
GTF2A1-201ENST00000298173 ZNF137PP52743 207 aa20.06■□□□□ 0.8
GTF2A1-201ENST00000298173 H2BFSP57053 126 aa20.06■□□□□ 0.8
GTF2A1-201ENST00000298173 ZNF585BQ52M93 769 aa20.06■□□□□ 0.8
GTF2A1-201ENST00000298173 HCP5Q6MZN7 132 aa20.06■□□□□ 0.8
GTF2A1-201ENST00000298173 ZNF833PQ6ZTB9 187 aa20.06■□□□□ 0.8
GTF2A1-201ENST00000298173 BEND2Q8NDZ0 799 aa20.06■□□□□ 0.8
GTF2A1-201ENST00000298173 ST6GALNAC6Q969X2 333 aa20.06■□□□□ 0.8
GTF2A1-201ENST00000298173 C18orf12Q96KH6 178 aa20.06■□□□□ 0.8
GTF2A1-201ENST00000298173 OR2A7Q96R45 310 aa20.06■□□□□ 0.8
GTF2A1-201ENST00000298173 ZNF436Q9C0F3 470 aaPredicted RBP20.06■□□□□ 0.8
GTF2A1-201ENST00000298173 RAB18Q9NP72 206 aa20.06■□□□□ 0.8
GTF2A1-201ENST00000298173 INSIG2Q9Y5U4 225 aa20.06■□□□□ 0.8
GTF2A1-201ENST00000298173 GOSR2O14653 212 aa20.05■□□□□ 0.8
GTF2A1-201ENST00000298173 DVL1P1P54792 670 aaPredicted RBP20.05■□□□□ 0.8
GTF2A1-201ENST00000298173 PRB3Q04118 309 aaPredicted RBP20.05■□□□□ 0.8
GTF2A1-201ENST00000298173 LGI3Q8N145 548 aa20.05■□□□□ 0.8
GTF2A1-201ENST00000298173 OR11H6Q8NGC7 330 aa20.05■□□□□ 0.8
GTF2A1-201ENST00000298173 OR5M8Q8NGP6 311 aa20.05■□□□□ 0.8
GTF2A1-201ENST00000298173 FYTTD1Q96QD9 318 aaKnown RBP20.05■□□□□ 0.8
GTF2A1-201ENST00000298173 SIRT7Q9NRC8 400 aa20.05■□□□□ 0.8
GTF2A1-201ENST00000298173 FAM212BQ9NTI7 297 aaPredicted RBP20.05■□□□□ 0.8
GTF2A1-201ENST00000298173 LIN7CQ9NUP9 197 aaKnown RBP20.05■□□□□ 0.8
GTF2A1-201ENST00000298173 M0R1X1 148 aa20.04■□□□□ 0.8
GTF2A1-201ENST00000298173 PRRX1P54821 245 aa20.04■□□□□ 0.8
GTF2A1-201ENST00000298173 SRPXP78539 464 aa20.04■□□□□ 0.8
GTF2A1-201ENST00000298173 LOXL1Q08397 574 aaPredicted RBP20.04■□□□□ 0.8
GTF2A1-201ENST00000298173 CATR1Q13166 79 aa20.04■□□□□ 0.8
GTF2A1-201ENST00000298173 NCR3LG1Q68D85 454 aa20.04■□□□□ 0.8
GTF2A1-201ENST00000298173 SELENOHQ8IZQ5 122 aaKnown RBP20.04■□□□□ 0.8
GTF2A1-201ENST00000298173 TCTEX1D1Q8N7M0 179 aa20.04■□□□□ 0.8
GTF2A1-201ENST00000298173 OR13D1Q8NGV5 346 aa20.04■□□□□ 0.8
GTF2A1-201ENST00000298173 PDZD2O15018 2839 aa20.04■□□□□ 0.8
GTF2A1-201ENST00000298173 TOR1AO14656 332 aa20.03■□□□□ 0.8
GTF2A1-201ENST00000298173 ADAP1O75689 374 aa20.03■□□□□ 0.8
GTF2A1-201ENST00000298173 SIX6O95475 246 aa20.03■□□□□ 0.8
GTF2A1-201ENST00000298173 PAX8Q06710 450 aa20.03■□□□□ 0.8
GTF2A1-201ENST00000298173 HLA-DRB5Q30154 266 aa20.03■□□□□ 0.8
GTF2A1-201ENST00000298173 DCAF12L2Q5VW00 463 aa20.03■□□□□ 0.8
GTF2A1-201ENST00000298173 VMO1Q7Z5L0 202 aa20.03■□□□□ 0.8
GTF2A1-201ENST00000298173 DRAXINQ8NBI3 349 aaPredicted RBP20.03■□□□□ 0.8
GTF2A1-201ENST00000298173 OR10X1Q8NGY0 326 aa20.03■□□□□ 0.8
GTF2A1-201ENST00000298173 DDB2Q92466 427 aa20.03■□□□□ 0.8
GTF2A1-201ENST00000298173 TMEM186Q96B77 213 aa20.03■□□□□ 0.8
GTF2A1-201ENST00000298173 S1PR3Q99500 378 aa20.03■□□□□ 0.8
GTF2A1-201ENST00000298173 LPAR2Q9HBW0 351 aa20.03■□□□□ 0.8
GTF2A1-201ENST00000298173 SRSF4Q08170 494 aaKnown RBP20.03■□□□□ 0.8
GTF2A1-201ENST00000298173 FAM71F2Q6NXP2 309 aa20.03■□□□□ 0.8
GTF2A1-201ENST00000298173 PNKDQ8N490 385 aa20.03■□□□□ 0.8
GTF2A1-201ENST00000298173 IL22RA2Q969J5 263 aa20.03■□□□□ 0.8
GTF2A1-201ENST00000298173 PPP1R14BQ96C90 147 aa20.03■□□□□ 0.8
GTF2A1-201ENST00000298173 HEXA-AS1Q9H8Q6 139 aa20.03■□□□□ 0.8
GTF2A1-201ENST00000298173 CCSO14618 274 aa20.02■□□□□ 0.8
GTF2A1-201ENST00000298173 ZNF16P17020 682 aaPredicted RBP20.02■□□□□ 0.8
GTF2A1-201ENST00000298173 LYZL2Q7Z4W2 148 aa20.02■□□□□ 0.8
GTF2A1-201ENST00000298173 TCTE3Q8IZS6 198 aa20.02■□□□□ 0.8
GTF2A1-201ENST00000298173 TCTEX1D2Q8WW35 142 aa20.02■□□□□ 0.8
GTF2A1-201ENST00000298173 WDR89Q96FK6 387 aaPredicted RBP20.02■□□□□ 0.8
GTF2A1-201ENST00000298173 REG4Q9BYZ8 158 aa20.02■□□□□ 0.8
GTF2A1-201ENST00000298173 B4DSR2 109 aa20.01■□□□□ 0.79
GTF2A1-201ENST00000298173 IGKV1-39P01597 117 aa20.01■□□□□ 0.79
GTF2A1-201ENST00000298173 IGKV1D-39P04432 117 aa20.01■□□□□ 0.79
GTF2A1-201ENST00000298173 HOXB5P09067 269 aa20.01■□□□□ 0.79
GTF2A1-201ENST00000298173 CT45A6P0DMU7 189 aa20.01■□□□□ 0.79
GTF2A1-201ENST00000298173 CT45A5P0DMU8 189 aa20.01■□□□□ 0.79
GTF2A1-201ENST00000298173 CT45A7P0DMV0 189 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms