RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 CDH20Q9HBT6 801 aa20.5■□□□□ 0.87
SPTSSA-201ENST00000298130 COL27A1Q8IZC6 1860 aaPredicted RBP20.5■□□□□ 0.87
SPTSSA-201ENST00000298130 LRP5LA4QPB2 252 aa20.5■□□□□ 0.87
SPTSSA-201ENST00000298130 SH2D1BO14796 132 aa20.5■□□□□ 0.87
SPTSSA-201ENST00000298130 CD81P60033 236 aa20.5■□□□□ 0.87
SPTSSA-201ENST00000298130 TNFRSF9Q07011 255 aa20.5■□□□□ 0.87
SPTSSA-201ENST00000298130 TFF3Q07654 80 aa20.5■□□□□ 0.87
SPTSSA-201ENST00000298130 PRAMEF6Q5VXH4 476 aa20.5■□□□□ 0.87
SPTSSA-201ENST00000298130 C1orf87Q8N0U7 546 aa20.5■□□□□ 0.87
SPTSSA-201ENST00000298130 TMEM265A0A087WTH1 108 aa20.49■□□□□ 0.87
SPTSSA-201ENST00000298130 CLDN34H7C241 214 aa20.49■□□□□ 0.87
SPTSSA-201ENST00000298130 PPP1R2P9O14990 202 aa20.49■□□□□ 0.87
SPTSSA-201ENST00000298130 SMIM7Q9BQ49 75 aa20.49■□□□□ 0.87
SPTSSA-201ENST00000298130 IL2RGP31785 369 aa20.49■□□□□ 0.87
SPTSSA-201ENST00000298130 TMEM164Q5U3C3 297 aa20.49■□□□□ 0.87
SPTSSA-201ENST00000298130 ALKBH2Q6NS38 261 aa20.49■□□□□ 0.87
SPTSSA-201ENST00000298130 ZPBPQ9BS86 351 aa20.49■□□□□ 0.87
SPTSSA-201ENST00000298130 VAX2Q9UIW0 290 aa20.49■□□□□ 0.87
SPTSSA-201ENST00000298130 ODAMA1E959 279 aa20.48■□□□□ 0.87
SPTSSA-201ENST00000298130 GALR2O43603 387 aaPredicted RBP20.48■□□□□ 0.87
SPTSSA-201ENST00000298130 CYB5R3P00387 301 aaPredicted RBP20.48■□□□□ 0.87
SPTSSA-201ENST00000298130 SSTR5P35346 364 aa20.48■□□□□ 0.87
SPTSSA-201ENST00000298130 GABRA2P47869 451 aa20.48■□□□□ 0.87
SPTSSA-201ENST00000298130 BRWD1-AS2P59051 145 aa20.48■□□□□ 0.87
SPTSSA-201ENST00000298130 DDA1Q9BW61 102 aa20.48■□□□□ 0.87
SPTSSA-201ENST00000298130 CXorf65A6NEN9 183 aa20.48■□□□□ 0.87
SPTSSA-201ENST00000298130 IGHV1-2P23083 117 aa20.48■□□□□ 0.87
SPTSSA-201ENST00000298130 UBE2NP61088 152 aaKnown RBP20.48■□□□□ 0.87
SPTSSA-201ENST00000298130 HIST3H2BBQ8N257 126 aa20.48■□□□□ 0.87
SPTSSA-201ENST00000298130 GUCD1Q96NT3 240 aa20.48■□□□□ 0.87
SPTSSA-201ENST00000298130 PFDN5Q99471 154 aa20.48■□□□□ 0.87
SPTSSA-201ENST00000298130 AURKAIP1Q9NWT8 199 aaPredicted RBP20.48■□□□□ 0.87
SPTSSA-201ENST00000298130 ICE1Q9Y2F5 2266 aa20.47■□□□□ 0.87
SPTSSA-201ENST00000298130 TRGV5A0A0B4J1U4 118 aa20.47■□□□□ 0.87
SPTSSA-201ENST00000298130 OR5H1A6NKK0 313 aa20.47■□□□□ 0.87
SPTSSA-201ENST00000298130 KLRC4-KLRK1H3BQV0 150 aa20.47■□□□□ 0.87
SPTSSA-201ENST00000298130 NANOS1Q8WY41 292 aaKnown RBP20.47■□□□□ 0.87
SPTSSA-201ENST00000298130 RHOVQ96L33 236 aa20.47■□□□□ 0.87
SPTSSA-201ENST00000298130 PSMG3Q9BT73 122 aaPredicted RBP20.47■□□□□ 0.87
SPTSSA-201ENST00000298130 MSL2Q9HCI7 577 aa20.47■□□□□ 0.87
SPTSSA-201ENST00000298130 MBNL3Q9NUK0 354 aaKnown RBP20.47■□□□□ 0.87
SPTSSA-201ENST00000298130 POLDIP2Q9Y2S7 368 aa20.47■□□□□ 0.87
SPTSSA-201ENST00000298130 NPIPB11E5RHQ5 1161 aa20.47■□□□□ 0.87
SPTSSA-201ENST00000298130 IER2Q9BTL4 223 aa20.47■□□□□ 0.87
SPTSSA-201ENST00000298130 ELOVL1Q9BW60 279 aa20.47■□□□□ 0.87
SPTSSA-201ENST00000298130 TNFSF15O95150 251 aa20.46■□□□□ 0.87
SPTSSA-201ENST00000298130 HBZP02008 142 aa20.46■□□□□ 0.87
SPTSSA-201ENST00000298130 MRGPRGQ86SM5 289 aa20.46■□□□□ 0.87
SPTSSA-201ENST00000298130 GALMQ96C23 342 aa20.46■□□□□ 0.87
SPTSSA-201ENST00000298130 GAB2Q9UQC2 676 aa20.46■□□□□ 0.87
SPTSSA-201ENST00000298130 SMG1Q96Q15 3661 aaKnown RBP20.46■□□□□ 0.87
SPTSSA-201ENST00000298130 EGR1P18146 543 aa20.46■□□□□ 0.87
SPTSSA-201ENST00000298130 SERF2P84101 59 aa20.46■□□□□ 0.87
SPTSSA-201ENST00000298130 C16orf82Q7Z2V1 217 aa20.46■□□□□ 0.87
SPTSSA-201ENST00000298130 CNEP1R1Q8N9A8 125 aa20.46■□□□□ 0.87
SPTSSA-201ENST00000298130 MDS2Q8NDY4 140 aa20.46■□□□□ 0.87
SPTSSA-201ENST00000298130 FAM234AQ9H0X4 552 aa20.46■□□□□ 0.87
SPTSSA-201ENST00000298130 KCNIP1Q9NZI2 227 aa20.46■□□□□ 0.87
SPTSSA-201ENST00000298130 KLF13Q9Y2Y9 288 aaPredicted RBP20.46■□□□□ 0.87
SPTSSA-201ENST00000298130 MLNRO43193 412 aa20.46■□□□□ 0.87
SPTSSA-201ENST00000298130 NDUFS6O75380 124 aaKnown RBP20.46■□□□□ 0.87
SPTSSA-201ENST00000298130 FGF7P21781 194 aa20.46■□□□□ 0.87
SPTSSA-201ENST00000298130 MOB1BQ7L9L4 216 aa20.46■□□□□ 0.87
SPTSSA-201ENST00000298130 ST8SIA5O15466 376 aa20.45■□□□□ 0.86
SPTSSA-201ENST00000298130 COL8A2P25067 703 aa20.45■□□□□ 0.86
SPTSSA-201ENST00000298130 ZNF146Q15072 292 aa20.45■□□□□ 0.86
SPTSSA-201ENST00000298130 TMEM14EPQ6UXP3 125 aa20.45■□□□□ 0.86
SPTSSA-201ENST00000298130 OR4F5Q8NH21 305 aa20.45■□□□□ 0.86
SPTSSA-201ENST00000298130 KLF14Q8TD94 323 aaPredicted RBP20.45■□□□□ 0.86
SPTSSA-201ENST00000298130 OR4F4Q96R69 305 aa20.45■□□□□ 0.86
SPTSSA-201ENST00000298130 GPR87Q9BY21 358 aa20.45■□□□□ 0.86
SPTSSA-201ENST00000298130 CADP27708 2225 aa20.45■□□□□ 0.86
SPTSSA-201ENST00000298130 SEC14L6B5MCN3 397 aa20.45■□□□□ 0.86
SPTSSA-201ENST00000298130 FABP6P51161 128 aa20.45■□□□□ 0.86
SPTSSA-201ENST00000298130 OR10G4Q8NGN3 311 aa20.45■□□□□ 0.86
SPTSSA-201ENST00000298130 WIPI2Q9Y4P8 454 aa20.45■□□□□ 0.86
SPTSSA-201ENST00000298130 MEF2BQ02080 365 aaPredicted RBP20.44■□□□□ 0.86
SPTSSA-201ENST00000298130 GCSAMLQ5JQS6 135 aa20.44■□□□□ 0.86
SPTSSA-201ENST00000298130 NCR3LG1Q68D85 454 aa20.44■□□□□ 0.86
SPTSSA-201ENST00000298130 SSX9Q7RTT3 188 aa20.44■□□□□ 0.86
SPTSSA-201ENST00000298130 ZNF645Q8N7E2 425 aa20.44■□□□□ 0.86
SPTSSA-201ENST00000298130 HIPK2Q9H2X6 1198 aa20.44■□□□□ 0.86
SPTSSA-201ENST00000298130 C19orf67A6NJJ6 358 aa20.44■□□□□ 0.86
SPTSSA-201ENST00000298130 RAC2P15153 192 aa20.44■□□□□ 0.86
SPTSSA-201ENST00000298130 FFAR4Q5NUL3 377 aa20.44■□□□□ 0.86
SPTSSA-201ENST00000298130 OR10G9Q8NGN4 311 aa20.44■□□□□ 0.86
SPTSSA-201ENST00000298130 OR10G7Q8NGN6 311 aa20.44■□□□□ 0.86
SPTSSA-201ENST00000298130 COQ2Q96H96 371 aa20.44■□□□□ 0.86
SPTSSA-201ENST00000298130 PRO1933Q9H354 126 aa20.44■□□□□ 0.86
SPTSSA-201ENST00000298130 BDP1A6H8Y1 2624 aa20.44■□□□□ 0.86
SPTSSA-201ENST00000298130 LINC00473A8K010 186 aa20.43■□□□□ 0.86
SPTSSA-201ENST00000298130 MAP1BP46821 2468 aaKnown RBP20.43■□□□□ 0.86
SPTSSA-201ENST00000298130 LRRC30A6NM36 301 aa20.43■□□□□ 0.86
SPTSSA-201ENST00000298130 B4DEV8 164 aa20.43■□□□□ 0.86
SPTSSA-201ENST00000298130 CD46P15529 392 aa20.43■□□□□ 0.86
SPTSSA-201ENST00000298130 SRSF6Q13247 344 aaKnown RBP20.43■□□□□ 0.86
SPTSSA-201ENST00000298130 GAMTQ14353 236 aa20.43■□□□□ 0.86
SPTSSA-201ENST00000298130 EDDM3AQ14507 147 aa20.43■□□□□ 0.86
SPTSSA-201ENST00000298130 ZNF766Q5HY98 468 aa20.43■□□□□ 0.86
SPTSSA-201ENST00000298130 LAMP3Q9UQV4 416 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms