RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 ZNF845Q96IR2 970 aaPredicted RBP9.61□□□□□ -0.87
SCLT1-201ENST00000281142 PROK2Q9HC23 129 aa9.61□□□□□ -0.87
SCLT1-201ENST00000281142 OR1A1Q9P1Q5 309 aa9.61□□□□□ -0.87
SCLT1-201ENST00000281142 ZNF816-ZNF321PA0A0X1KG74 233 aa9.61□□□□□ -0.87
SCLT1-201ENST00000281142 HS3ST1O14792 307 aa9.61□□□□□ -0.87
SCLT1-201ENST00000281142 SIAH2O43255 324 aa9.61□□□□□ -0.87
SCLT1-201ENST00000281142 SYNGR2O43760 224 aa9.61□□□□□ -0.87
SCLT1-201ENST00000281142 IL6RP08887 468 aaPredicted RBP9.61□□□□□ -0.87
SCLT1-201ENST00000281142 MLF1P58340 268 aa9.61□□□□□ -0.87
SCLT1-201ENST00000281142 OR5I1Q13606 314 aa9.61□□□□□ -0.87
SCLT1-201ENST00000281142 BATFQ16520 125 aa9.61□□□□□ -0.87
SCLT1-201ENST00000281142 CEACAM16Q2WEN9 425 aa9.61□□□□□ -0.87
SCLT1-201ENST00000281142 TMEM41BQ5BJD5 291 aa9.61□□□□□ -0.87
SCLT1-201ENST00000281142 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.61□□□□□ -0.87
SCLT1-201ENST00000281142 OR56B2PQ8NGI1 322 aa9.61□□□□□ -0.87
SCLT1-201ENST00000281142 MRPL30Q8TCC3 161 aaKnown RBP9.61□□□□□ -0.87
SCLT1-201ENST00000281142 RDH5Q92781 318 aa9.61□□□□□ -0.87
SCLT1-201ENST00000281142 ACY3Q96HD9 319 aa9.61□□□□□ -0.87
SCLT1-201ENST00000281142 P2RX4Q99571 388 aa9.61□□□□□ -0.87
SCLT1-201ENST00000281142 OR2H1Q9GZK4 316 aa9.61□□□□□ -0.87
SCLT1-201ENST00000281142 SLC39A9Q9NUM3 307 aa9.61□□□□□ -0.87
SCLT1-201ENST00000281142 MTCH1Q9NZJ7 389 aa9.61□□□□□ -0.87
SCLT1-201ENST00000281142 PPP1R3CQ9UQK1 317 aa9.61□□□□□ -0.87
SCLT1-201ENST00000281142 MSRB2Q9Y3D2 182 aa9.61□□□□□ -0.87
SCLT1-201ENST00000281142 NCKAP5O14513 1909 aa9.6□□□□□ -0.87
SCLT1-201ENST00000281142 HPRT1P00492 218 aa9.6□□□□□ -0.87
SCLT1-201ENST00000281142 SRSF6Q13247 344 aaKnown RBP9.6□□□□□ -0.87
SCLT1-201ENST00000281142 ACTL10Q5JWF8 245 aa9.6□□□□□ -0.87
SCLT1-201ENST00000281142 C9orf135Q5VTT2 229 aa9.6□□□□□ -0.87
SCLT1-201ENST00000281142 CPEB3Q8NE35 698 aaKnown RBP9.6□□□□□ -0.87
SCLT1-201ENST00000281142 OR4F5Q8NH21 305 aa9.6□□□□□ -0.87
SCLT1-201ENST00000281142 OR5B12Q96R08 314 aa9.6□□□□□ -0.87
SCLT1-201ENST00000281142 OR4F4Q96R69 305 aa9.6□□□□□ -0.87
SCLT1-201ENST00000281142 WDR61Q9GZS3 305 aaKnown RBP9.6□□□□□ -0.87
SCLT1-201ENST00000281142 NBEAQ8NFP9 2946 aa9.6□□□□□ -0.87
SCLT1-201ENST00000281142 DUXBA0A1W2PPF3 345 aa9.6□□□□□ -0.87
SCLT1-201ENST00000281142 C1QTNF9BB2RNN3 333 aa9.6□□□□□ -0.87
SCLT1-201ENST00000281142 SYNGR1O43759 233 aa9.6□□□□□ -0.87
SCLT1-201ENST00000281142 HRASP01112 189 aa9.6□□□□□ -0.87
SCLT1-201ENST00000281142 FOLR3P41439 243 aa9.6□□□□□ -0.87
SCLT1-201ENST00000281142 TFPI2P48307 235 aa9.6□□□□□ -0.87
SCLT1-201ENST00000281142 TNFSF10P50591 281 aa9.6□□□□□ -0.87
SCLT1-201ENST00000281142 AARDQ4LEZ3 155 aa9.6□□□□□ -0.87
SCLT1-201ENST00000281142 YRDCQ86U90 279 aaKnown RBP9.6□□□□□ -0.87
SCLT1-201ENST00000281142 RAB40CQ96S21 281 aa9.6□□□□□ -0.87
SCLT1-201ENST00000281142 NAGKQ9UJ70 344 aa9.6□□□□□ -0.87
SCLT1-201ENST00000281142 C21orf140B9A014 251 aa9.59□□□□□ -0.87
SCLT1-201ENST00000281142 CCKARP32238 428 aa9.59□□□□□ -0.87
SCLT1-201ENST00000281142 PMP22Q01453 160 aa9.59□□□□□ -0.87
SCLT1-201ENST00000281142 RNPS1Q15287 305 aaKnown RBP9.59□□□□□ -0.87
SCLT1-201ENST00000281142 VASH2Q86V25 355 aa9.59□□□□□ -0.87
SCLT1-201ENST00000281142 GBGT1Q8N5D6 347 aa9.59□□□□□ -0.87
SCLT1-201ENST00000281142 SPOCK3Q9BQ16 436 aa9.59□□□□□ -0.87
SCLT1-201ENST00000281142 DNAJC4Q9NNZ3 241 aa9.59□□□□□ -0.87
SCLT1-201ENST00000281142 A0A0G2JMM0 328 aa9.59□□□□□ -0.87
SCLT1-201ENST00000281142 A0A1W2PPB8 328 aa9.59□□□□□ -0.87
SCLT1-201ENST00000281142 A0A1W2PRS3 328 aa9.59□□□□□ -0.87
SCLT1-201ENST00000281142 CD300LBA8K4G0 201 aa9.59□□□□□ -0.87
SCLT1-201ENST00000281142 KIR3DP1A8MWS1 328 aa9.59□□□□□ -0.87
SCLT1-201ENST00000281142 GYPAP02724 150 aa9.59□□□□□ -0.87
SCLT1-201ENST00000281142 LIFP15018 202 aa9.59□□□□□ -0.87
SCLT1-201ENST00000281142 TDRG1Q3Y452 100 aa9.59□□□□□ -0.87
SCLT1-201ENST00000281142 ZNF324BQ6AW86 544 aaPredicted RBP9.59□□□□□ -0.87
SCLT1-201ENST00000281142 TAF15Q92804 592 aaKnown RBP eCLIP9.59□□□□□ -0.87
SCLT1-201ENST00000281142 FOXB1Q99853 325 aa9.59□□□□□ -0.87
SCLT1-201ENST00000281142 PSMG3Q9BT73 122 aaPredicted RBP9.59□□□□□ -0.87
SCLT1-201ENST00000281142 OR51I2Q9H344 312 aa9.59□□□□□ -0.87
SCLT1-201ENST00000281142 ATP23Q9Y6H3 246 aa9.59□□□□□ -0.87
SCLT1-201ENST00000281142 CACNA1AO00555 2505 aa9.59□□□□□ -0.87
SCLT1-201ENST00000281142 PGPEP1LA6NFU8 196 aa9.59□□□□□ -0.87
SCLT1-201ENST00000281142 IGLV2-14P01704 120 aa9.59□□□□□ -0.87
SCLT1-201ENST00000281142 NPPCP23582 126 aa9.59□□□□□ -0.87
SCLT1-201ENST00000281142 PRDX4Q13162 271 aa9.59□□□□□ -0.87
SCLT1-201ENST00000281142 FAM78BQ5VT40 261 aa9.59□□□□□ -0.87
SCLT1-201ENST00000281142 TGIF2LYQ8IUE0 185 aa9.59□□□□□ -0.87
SCLT1-201ENST00000281142 OR2T10Q8NGZ9 312 aa9.59□□□□□ -0.87
SCLT1-201ENST00000281142 OR5P3Q8WZ94 311 aa9.59□□□□□ -0.87
SCLT1-201ENST00000281142 SDSLQ96GA7 329 aa9.59□□□□□ -0.87
SCLT1-201ENST00000281142 OR6C3Q9NZP0 311 aa9.59□□□□□ -0.87
SCLT1-201ENST00000281142 USF3Q68DE3 2245 aa9.58□□□□□ -0.88
SCLT1-201ENST00000281142 VAMP5O95183 116 aa9.58□□□□□ -0.88
SCLT1-201ENST00000281142 IFNA1P01562 189 aa9.58□□□□□ -0.88
SCLT1-201ENST00000281142 CRYAAP02489 173 aa9.58□□□□□ -0.88
SCLT1-201ENST00000281142 KRTAP27-1Q3LI81 207 aa9.58□□□□□ -0.88
SCLT1-201ENST00000281142 TCF23Q7RTU1 214 aa9.58□□□□□ -0.88
SCLT1-201ENST00000281142 PPP1R32Q7Z5V6 425 aa9.58□□□□□ -0.88
SCLT1-201ENST00000281142 MRPL52Q86TS9 123 aaKnown RBP9.58□□□□□ -0.88
SCLT1-201ENST00000281142 AGMATQ9BSE5 352 aa9.58□□□□□ -0.88
SCLT1-201ENST00000281142 OR2J1Q9GZK6 312 aa9.58□□□□□ -0.88
SCLT1-201ENST00000281142 OR51B6Q9H340 312 aa9.58□□□□□ -0.88
SCLT1-201ENST00000281142 LOC102723996A0A087X1L8 192 aa9.58□□□□□ -0.88
SCLT1-201ENST00000281142 LILRA1O75019 489 aa9.58□□□□□ -0.88
SCLT1-201ENST00000281142 OTX2P32243 289 aa9.58□□□□□ -0.88
SCLT1-201ENST00000281142 FGF12P61328 243 aa9.58□□□□□ -0.88
SCLT1-201ENST00000281142 SLC38A11Q08AI6 406 aa9.58□□□□□ -0.88
SCLT1-201ENST00000281142 CST9LP1Q5W188 147 aa9.58□□□□□ -0.88
SCLT1-201ENST00000281142 Q6ZS49 121 aa9.58□□□□□ -0.88
SCLT1-201ENST00000281142 AAED1Q7RTV5 226 aa9.58□□□□□ -0.88
SCLT1-201ENST00000281142 IL22RA2Q969J5 263 aa9.58□□□□□ -0.88
SCLT1-201ENST00000281142 TBX15Q96SF7 602 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms