RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 CLDN14O95500 239 aa14.91□□□□□ -0.02
CAPN1-201ENST00000279247 GAPDHP04406 335 aaKnown RBP14.91□□□□□ -0.02
CAPN1-201ENST00000279247 LURAP1Q96LR2 239 aa14.91□□□□□ -0.02
CAPN1-201ENST00000279247 KCNJ16Q9NPI9 418 aa14.91□□□□□ -0.02
CAPN1-201ENST00000279247 IL19Q9UHD0 177 aa14.91□□□□□ -0.02
CAPN1-201ENST00000279247 CAMLGP49069 296 aa14.91□□□□□ -0.02
CAPN1-201ENST00000279247 GNG10P50151 68 aa14.91□□□□□ -0.02
CAPN1-201ENST00000279247 PAX9P55771 341 aa14.91□□□□□ -0.02
CAPN1-201ENST00000279247 A0A1B0GWJ7 208 aa14.9□□□□□ -0.02
CAPN1-201ENST00000279247 SLC31A2O15432 143 aa14.9□□□□□ -0.02
CAPN1-201ENST00000279247 DCHS2Q6V1P9 2916 aa14.9□□□□□ -0.02
CAPN1-201ENST00000279247 ODF3L1Q8IXM7 274 aa14.9□□□□□ -0.02
CAPN1-201ENST00000279247 IL22RA2Q969J5 263 aa14.9□□□□□ -0.02
CAPN1-201ENST00000279247 MARVELD3Q96A59 401 aa14.9□□□□□ -0.02
CAPN1-201ENST00000279247 ABHD14AQ9BUJ0 271 aa14.9□□□□□ -0.02
CAPN1-201ENST00000279247 SLC25A31Q9H0C2 315 aa14.9□□□□□ -0.02
CAPN1-201ENST00000279247 RNF115Q9Y4L5 304 aa14.9□□□□□ -0.02
CAPN1-201ENST00000279247 USP24Q9UPU5 2620 aa14.9□□□□□ -0.02
CAPN1-201ENST00000279247 A0A1B0GU03 582 aa14.9□□□□□ -0.02
CAPN1-201ENST00000279247 DUXBA0A1W2PPF3 345 aa14.9□□□□□ -0.02
CAPN1-201ENST00000279247 M0R1X1 148 aa14.9□□□□□ -0.02
CAPN1-201ENST00000279247 PLAUP00749 431 aa14.9□□□□□ -0.02
CAPN1-201ENST00000279247 LHBP01229 141 aa14.9□□□□□ -0.02
CAPN1-201ENST00000279247 M6PRP20645 277 aa14.9□□□□□ -0.02
CAPN1-201ENST00000279247 SULT1A2P50226 295 aa14.9□□□□□ -0.02
CAPN1-201ENST00000279247 ZNF134P52741 427 aa14.9□□□□□ -0.02
CAPN1-201ENST00000279247 CATR1Q13166 79 aa14.9□□□□□ -0.02
CAPN1-201ENST00000279247 VKORC1L1Q8N0U8 176 aa14.9□□□□□ -0.02
CAPN1-201ENST00000279247 FAM213BQ8TBF2 198 aa14.9□□□□□ -0.02
CAPN1-201ENST00000279247 SAP30LQ9HAJ7 183 aa14.9□□□□□ -0.02
CAPN1-201ENST00000279247 DYNLRB1Q9NP97 96 aa14.9□□□□□ -0.02
CAPN1-201ENST00000279247 ZNRD1Q9P1U0 126 aa14.9□□□□□ -0.02
CAPN1-201ENST00000279247 SYNGR2O43760 224 aa14.9□□□□□ -0.02
CAPN1-201ENST00000279247 FCGR3BO75015 233 aa14.9□□□□□ -0.02
CAPN1-201ENST00000279247 CASP6P55212 293 aa14.9□□□□□ -0.02
CAPN1-201ENST00000279247 BRWD1-AS2P59051 145 aa14.9□□□□□ -0.02
CAPN1-201ENST00000279247 NCR3LG1Q68D85 454 aa14.9□□□□□ -0.02
CAPN1-201ENST00000279247 FAM212BQ9NTI7 297 aaPredicted RBP14.9□□□□□ -0.02
CAPN1-201ENST00000279247 CALYQ9NYX4 217 aa14.9□□□□□ -0.02
CAPN1-201ENST00000279247 RNF212BA8MTL3 300 aa14.89□□□□□ -0.03
CAPN1-201ENST00000279247 C17orf100A8MU93 164 aa14.89□□□□□ -0.03
CAPN1-201ENST00000279247 GZMHP20718 246 aa14.89□□□□□ -0.03
CAPN1-201ENST00000279247 ATP6V0CP27449 155 aa14.89□□□□□ -0.03
CAPN1-201ENST00000279247 AKIRIN2Q53H80 203 aa14.89□□□□□ -0.03
CAPN1-201ENST00000279247 OR8G2PQ6IF36 304 aa14.89□□□□□ -0.03
CAPN1-201ENST00000279247 OR2G3Q8NGZ4 309 aa14.89□□□□□ -0.03
CAPN1-201ENST00000279247 LRRC46Q96FV0 321 aa14.89□□□□□ -0.03
CAPN1-201ENST00000279247 C11orf1Q9H5F2 150 aa14.89□□□□□ -0.03
CAPN1-201ENST00000279247 PSENENQ9NZ42 101 aa14.89□□□□□ -0.03
CAPN1-201ENST00000279247 TSPAN4O14817 238 aa14.89□□□□□ -0.03
CAPN1-201ENST00000279247 MORN2Q502X0 79 aa14.89□□□□□ -0.03
CAPN1-201ENST00000279247 MIDNQ504T8 468 aa14.89□□□□□ -0.03
CAPN1-201ENST00000279247 PITX3O75364 302 aa14.88□□□□□ -0.03
CAPN1-201ENST00000279247 RPL23AP62750 156 aaKnown RBP14.88□□□□□ -0.03
CAPN1-201ENST00000279247 C3orf36Q3SXR2 165 aa14.88□□□□□ -0.03
CAPN1-201ENST00000279247 STX12Q86Y82 276 aa14.88□□□□□ -0.03
CAPN1-201ENST00000279247 ZNF295-AS1Q8N0V1 137 aa14.88□□□□□ -0.03
CAPN1-201ENST00000279247 AGMATQ9BSE5 352 aa14.88□□□□□ -0.03
CAPN1-201ENST00000279247 CLN8Q9UBY8 286 aa14.88□□□□□ -0.03
CAPN1-201ENST00000279247 CLEC18AA5D8T8 446 aa14.88□□□□□ -0.03
CAPN1-201ENST00000279247 KIAA1324LA8MWY0 1029 aaPredicted RBP14.88□□□□□ -0.03
CAPN1-201ENST00000279247 F8W036 122 aa14.88□□□□□ -0.03
CAPN1-201ENST00000279247 MUC1P15941 1255 aaPredicted RBP14.88□□□□□ -0.03
CAPN1-201ENST00000279247 CFHR2P36980 270 aa14.88□□□□□ -0.03
CAPN1-201ENST00000279247 BLOC1S1P78537 153 aa14.88□□□□□ -0.03
CAPN1-201ENST00000279247 CDSNQ15517 529 aa14.88□□□□□ -0.03
CAPN1-201ENST00000279247 FAM209AQ5JX71 171 aa14.88□□□□□ -0.03
CAPN1-201ENST00000279247 EIF4E3Q8N5X7 224 aaKnown RBP14.88□□□□□ -0.03
CAPN1-201ENST00000279247 CLEC18CQ8NCF0 446 aa14.88□□□□□ -0.03
CAPN1-201ENST00000279247 NUP37Q8NFH4 326 aa14.88□□□□□ -0.03
CAPN1-201ENST00000279247 SMIM8Q96KF7 97 aa14.88□□□□□ -0.03
CAPN1-201ENST00000279247 VKORC1Q9BQB6 163 aa14.88□□□□□ -0.03
CAPN1-201ENST00000279247 NUP50Q9UKX7 468 aa14.88□□□□□ -0.03
CAPN1-201ENST00000279247 FBXO7Q9Y3I1 522 aa14.88□□□□□ -0.03
CAPN1-201ENST00000279247 TNCP24821 2201 aa14.88□□□□□ -0.03
CAPN1-201ENST00000279247 PROP1O75360 226 aa14.87□□□□□ -0.03
CAPN1-201ENST00000279247 EIF3GO75821 320 aaKnown RBP eCLIP14.87□□□□□ -0.03
CAPN1-201ENST00000279247 OR2B8PP59922 312 aa14.87□□□□□ -0.03
CAPN1-201ENST00000279247 PJVKQ0ZLH3 352 aa14.87□□□□□ -0.03
CAPN1-201ENST00000279247 TSNAXQ99598 290 aaKnown RBP14.87□□□□□ -0.03
CAPN1-201ENST00000279247 MMP26Q9NRE1 261 aa14.87□□□□□ -0.03
CAPN1-201ENST00000279247 JKAMPQ9P055 326 aa14.87□□□□□ -0.03
CAPN1-201ENST00000279247 DSCAML1Q8TD84 2053 aa14.87□□□□□ -0.03
CAPN1-201ENST00000279247 MMP23AO75900 390 aa14.87□□□□□ -0.03
CAPN1-201ENST00000279247 TSPAN15O95858 294 aa14.87□□□□□ -0.03
CAPN1-201ENST00000279247 ZDHHC16Q969W1 377 aa14.87□□□□□ -0.03
CAPN1-201ENST00000279247 GAFA1Q96PS6 74 aa14.87□□□□□ -0.03
CAPN1-201ENST00000279247 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.87□□□□□ -0.03
CAPN1-201ENST00000279247 ADH4P08319 380 aa14.87□□□□□ -0.03
CAPN1-201ENST00000279247 ZNF266Q14584 549 aa14.87□□□□□ -0.03
CAPN1-201ENST00000279247 GUCA2BQ16661 112 aa14.87□□□□□ -0.03
CAPN1-201ENST00000279247 H2BFWTQ7Z2G1 175 aa14.87□□□□□ -0.03
CAPN1-201ENST00000279247 LSM10Q969L4 123 aaKnown RBP14.87□□□□□ -0.03
CAPN1-201ENST00000279247 TMEM218A2RU14 115 aa14.86□□□□□ -0.03
CAPN1-201ENST00000279247 GPR37O15354 613 aa14.86□□□□□ -0.03
CAPN1-201ENST00000279247 SPP1P10451 314 aa14.86□□□□□ -0.03
CAPN1-201ENST00000279247 ADCYAP1P18509 176 aa14.86□□□□□ -0.03
CAPN1-201ENST00000279247 TNFRSF1AP19438 455 aa14.86□□□□□ -0.03
CAPN1-201ENST00000279247 GATA4P43694 442 aa14.86□□□□□ -0.03
CAPN1-201ENST00000279247 STUMQ69YW2 141 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms