RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 GGNQ86UU5 652 aa10.92□□□□□ -0.66
COL8A1-202ENST00000273342 BEND2Q8NDZ0 799 aa10.92□□□□□ -0.66
COL8A1-202ENST00000273342 OR1L1Q8NH94 360 aa10.92□□□□□ -0.66
COL8A1-202ENST00000273342 PINX1Q96BK5 328 aaKnown RBP10.92□□□□□ -0.66
COL8A1-202ENST00000273342 PYGO2Q9BRQ0 406 aa10.92□□□□□ -0.66
COL8A1-202ENST00000273342 EP300Q09472 2414 aaPredicted RBP10.92□□□□□ -0.66
COL8A1-202ENST00000273342 DEGS1O15121 323 aa10.92□□□□□ -0.66
COL8A1-202ENST00000273342 ZG16O60844 167 aa10.92□□□□□ -0.66
COL8A1-202ENST00000273342 MRPL33O75394 65 aaKnown RBP10.92□□□□□ -0.66
COL8A1-202ENST00000273342 CTXN2P0C2S0 81 aa10.92□□□□□ -0.66
COL8A1-202ENST00000273342 PCBD1P61457 104 aa10.92□□□□□ -0.66
COL8A1-202ENST00000273342 CARFQ8N187 725 aa10.92□□□□□ -0.66
COL8A1-202ENST00000273342 GBGT1Q8N5D6 347 aa10.92□□□□□ -0.66
COL8A1-202ENST00000273342 NAGKQ9UJ70 344 aa10.92□□□□□ -0.66
COL8A1-202ENST00000273342 PRR14LQ5THK1 2151 aa10.91□□□□□ -0.66
COL8A1-202ENST00000273342 IGHV1-45A0A0A0MS14 117 aa10.91□□□□□ -0.66
COL8A1-202ENST00000273342 PATE3B3GLJ2 98 aa10.91□□□□□ -0.66
COL8A1-202ENST00000273342 GDF1P27539 372 aa10.91□□□□□ -0.66
COL8A1-202ENST00000273342 ERVFC1-1P60608 527 aa10.91□□□□□ -0.66
COL8A1-202ENST00000273342 CEACAM21Q3KPI0 293 aa10.91□□□□□ -0.66
COL8A1-202ENST00000273342 ACY3Q96HD9 319 aa10.91□□□□□ -0.66
COL8A1-202ENST00000273342 C1QTNF5Q9BXJ0 243 aa10.91□□□□□ -0.66
COL8A1-202ENST00000273342 ICE1Q9Y2F5 2266 aa10.91□□□□□ -0.66
COL8A1-202ENST00000273342 SPINK4O60575 86 aa10.91□□□□□ -0.66
COL8A1-202ENST00000273342 MBP02144 154 aa10.91□□□□□ -0.66
COL8A1-202ENST00000273342 TFPI2P48307 235 aa10.91□□□□□ -0.66
COL8A1-202ENST00000273342 EDDM3BP56851 147 aa10.91□□□□□ -0.66
COL8A1-202ENST00000273342 FAM58AQ8N1B3 248 aa10.91□□□□□ -0.66
COL8A1-202ENST00000273342 DRAM1Q8N682 238 aa10.91□□□□□ -0.66
COL8A1-202ENST00000273342 SGMS2Q8NHU3 365 aa10.91□□□□□ -0.66
COL8A1-202ENST00000273342 REPIN1Q9BWE0 567 aaKnown RBP10.91□□□□□ -0.66
COL8A1-202ENST00000273342 MANBALQ9NQG1 85 aa10.91□□□□□ -0.66
COL8A1-202ENST00000273342 PPIAL4AQ9Y536 164 aa10.91□□□□□ -0.66
COL8A1-202ENST00000273342 CFAP47Q6ZTR5 3102 aa10.91□□□□□ -0.66
COL8A1-202ENST00000273342 P04436 131 aa10.9□□□□□ -0.66
COL8A1-202ENST00000273342 COX6A1P12074 109 aa10.9□□□□□ -0.66
COL8A1-202ENST00000273342 BTF3P20290 206 aaKnown RBP10.9□□□□□ -0.66
COL8A1-202ENST00000273342 HOXA6P31267 233 aa10.9□□□□□ -0.66
COL8A1-202ENST00000273342 TDGF1P3P51864 188 aa10.9□□□□□ -0.66
COL8A1-202ENST00000273342 MRPL14Q6P1L8 145 aaKnown RBP10.9□□□□□ -0.66
COL8A1-202ENST00000273342 HPRT1P00492 218 aa10.9□□□□□ -0.66
COL8A1-202ENST00000273342 IRF2P14316 349 aa10.9□□□□□ -0.66
COL8A1-202ENST00000273342 OTX2P32243 289 aa10.9□□□□□ -0.66
COL8A1-202ENST00000273342 B3GALT5-AS1P59052 145 aa10.9□□□□□ -0.66
COL8A1-202ENST00000273342 KCNIP4Q6PIL6 250 aa10.9□□□□□ -0.66
COL8A1-202ENST00000273342 TGIF2LYQ8IUE0 185 aa10.9□□□□□ -0.66
COL8A1-202ENST00000273342 ZNF709Q8N972 641 aa10.9□□□□□ -0.66
COL8A1-202ENST00000273342 NEIL1Q96FI4 390 aaPredicted RBP10.9□□□□□ -0.66
COL8A1-202ENST00000273342 FAM103A1Q9BTL3 118 aaKnown RBP10.9□□□□□ -0.66
COL8A1-202ENST00000273342 PARD6AQ9NPB6 346 aa10.9□□□□□ -0.66
COL8A1-202ENST00000273342 PRDM6Q9NQX0 595 aa10.9□□□□□ -0.66
COL8A1-202ENST00000273342 CNOT1A5YKK6 2376 aaKnown RBP10.9□□□□□ -0.66
COL8A1-202ENST00000273342 CTXND1A0A1B0GTU2 59 aa10.9□□□□□ -0.67
COL8A1-202ENST00000273342 FRMD6-AS1P0C7T7 363 aa10.9□□□□□ -0.67
COL8A1-202ENST00000273342 CBLN1P23435 193 aa10.9□□□□□ -0.67
COL8A1-202ENST00000273342 LTC4SQ16873 150 aa10.9□□□□□ -0.67
COL8A1-202ENST00000273342 ACOT6Q3I5F7 207 aaPredicted RBP10.9□□□□□ -0.67
COL8A1-202ENST00000273342 COA6Q5JTJ3 125 aaKnown RBP10.9□□□□□ -0.67
COL8A1-202ENST00000273342 TUSC5Q8IXB3 177 aa10.9□□□□□ -0.67
COL8A1-202ENST00000273342 TMEM208Q9BTX3 173 aa10.9□□□□□ -0.67
COL8A1-202ENST00000273342 SF3B5Q9BWJ5 86 aaKnown RBP10.9□□□□□ -0.67
COL8A1-202ENST00000273342 GJE1A6NN92 205 aa10.89□□□□□ -0.67
COL8A1-202ENST00000273342 ADMP35318 185 aa10.89□□□□□ -0.67
COL8A1-202ENST00000273342 TRIM61Q5EBN2 209 aa10.89□□□□□ -0.67
COL8A1-202ENST00000273342 OR5A2Q8NGI9 324 aa10.89□□□□□ -0.67
COL8A1-202ENST00000273342 VN1R17PQ8TDU5 208 aa10.89□□□□□ -0.67
COL8A1-202ENST00000273342 RBM14Q96PK6 669 aaKnown RBP10.89□□□□□ -0.67
COL8A1-202ENST00000273342 ZNF391Q9UJN7 358 aa10.89□□□□□ -0.67
COL8A1-202ENST00000273342 PINLYPA6NC86 204 aa10.89□□□□□ -0.67
COL8A1-202ENST00000273342 CDKN1AP38936 164 aa10.89□□□□□ -0.67
COL8A1-202ENST00000273342 PPP1CBP62140 327 aa10.89□□□□□ -0.67
COL8A1-202ENST00000273342 GNB1P62873 340 aa10.89□□□□□ -0.67
COL8A1-202ENST00000273342 C3AR1Q16581 482 aa10.89□□□□□ -0.67
COL8A1-202ENST00000273342 CXorf67Q86X51 503 aaPredicted RBP10.89□□□□□ -0.67
COL8A1-202ENST00000273342 CADM4Q8NFZ8 388 aa10.89□□□□□ -0.67
COL8A1-202ENST00000273342 OR10P1Q8NGE3 313 aa10.89□□□□□ -0.67
COL8A1-202ENST00000273342 IMMP1LQ96LU5 166 aa10.89□□□□□ -0.67
COL8A1-202ENST00000273342 HIPK2Q9H2X6 1198 aa10.89□□□□□ -0.67
COL8A1-202ENST00000273342 DEPPQ9NTK1 212 aa10.89□□□□□ -0.67
COL8A1-202ENST00000273342 DCHS1Q96JQ0 3298 aa10.89□□□□□ -0.67
COL8A1-202ENST00000273342 DEFB108AA8MXU0 73 aa10.88□□□□□ -0.67
COL8A1-202ENST00000273342 F2Z2F3 143 aa10.88□□□□□ -0.67
COL8A1-202ENST00000273342 TMEM250H0YL14 139 aa10.88□□□□□ -0.67
COL8A1-202ENST00000273342 RBFOX2O43251 390 aaKnown RBP eCLIP10.88□□□□□ -0.67
COL8A1-202ENST00000273342 CELA3AP09093 270 aa10.88□□□□□ -0.67
COL8A1-202ENST00000273342 RPL30P62888 115 aaKnown RBP10.88□□□□□ -0.67
COL8A1-202ENST00000273342 Q6ZS49 121 aa10.88□□□□□ -0.67
COL8A1-202ENST00000273342 LINC01551Q86U37 167 aa10.88□□□□□ -0.67
COL8A1-202ENST00000273342 CISD2Q8N5K1 135 aaKnown RBP10.88□□□□□ -0.67
COL8A1-202ENST00000273342 TPRX1Q8N7U7 411 aa10.88□□□□□ -0.67
COL8A1-202ENST00000273342 PHF7Q9BWX1 381 aaPredicted RBP10.88□□□□□ -0.67
COL8A1-202ENST00000273342 FAM234AQ9H0X4 552 aa10.88□□□□□ -0.67
COL8A1-202ENST00000273342 OR2D2Q9H210 308 aa10.88□□□□□ -0.67
COL8A1-202ENST00000273342 ZDHHC11Q9H8X9 412 aa10.88□□□□□ -0.67
COL8A1-202ENST00000273342 NCKAP5O14513 1909 aa10.88□□□□□ -0.67
COL8A1-202ENST00000273342 IGHV3-43A0A0B4J1X8 118 aa10.88□□□□□ -0.67
COL8A1-202ENST00000273342 SLC17A3O00476 420 aa10.88□□□□□ -0.67
COL8A1-202ENST00000273342 GGCTO75223 188 aaKnown RBP10.88□□□□□ -0.67
COL8A1-202ENST00000273342 S1PR2O95136 353 aa10.88□□□□□ -0.67
COL8A1-202ENST00000273342 IGHV3-13P01766 116 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms