RNA–Protein interactions for RNA: ENST00000268896.9

PCTP-201, Transcript of phosphatidylcholine transfer protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCTP, Length 2,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-201ENST00000268896 CSMD2Q7Z408 3487 aa13.24□□□□□ -0.29
PCTP-201ENST00000268896 TRBV23-1A0A0A0MS06 115 aa13.23□□□□□ -0.29
PCTP-201ENST00000268896 LINC00473A8K010 186 aa13.23□□□□□ -0.29
PCTP-201ENST00000268896 C22orf46C9J442 243 aa13.23□□□□□ -0.29
PCTP-201ENST00000268896 M0R1X1 148 aa13.23□□□□□ -0.29
PCTP-201ENST00000268896 RAMP3O60896 148 aa13.23□□□□□ -0.29
PCTP-201ENST00000268896 SCGB1D2O95969 90 aa13.23□□□□□ -0.29
PCTP-201ENST00000268896 PSMB6P28072 239 aa13.23□□□□□ -0.29
PCTP-201ENST00000268896 DLX6P56179 175 aa13.23□□□□□ -0.29
PCTP-201ENST00000268896 ZNF816Q0VGE8 651 aaPredicted RBP13.23□□□□□ -0.29
PCTP-201ENST00000268896 LRTM2Q8N967 370 aa13.23□□□□□ -0.29
PCTP-201ENST00000268896 ZBTB34Q8NCN2 500 aa13.23□□□□□ -0.29
PCTP-201ENST00000268896 ZNF439Q8NDP4 499 aa13.23□□□□□ -0.29
PCTP-201ENST00000268896 THAP6Q8TBB0 222 aa13.23□□□□□ -0.29
PCTP-201ENST00000268896 PERPQ96FX8 193 aa13.23□□□□□ -0.29
PCTP-201ENST00000268896 C2orf50Q96LR7 162 aa13.23□□□□□ -0.29
PCTP-201ENST00000268896 TMEM56Q96MV1 263 aa13.23□□□□□ -0.29
PCTP-201ENST00000268896 LIN7CQ9NUP9 197 aaKnown RBP13.23□□□□□ -0.29
PCTP-201ENST00000268896 ONECUT1Q9UBC0 465 aa13.23□□□□□ -0.29
PCTP-201ENST00000268896 TMEM56-RWDD3S4R434 201 aa13.23□□□□□ -0.29
PCTP-201ENST00000268896 SAA2-SAA4A0A096LPE2 208 aa13.23□□□□□ -0.29
PCTP-201ENST00000268896 PROP1O75360 226 aa13.23□□□□□ -0.29
PCTP-201ENST00000268896 CDS2O95674 445 aa13.23□□□□□ -0.29
PCTP-201ENST00000268896 SAA2P0DJI9 122 aaPredicted RBP13.23□□□□□ -0.29
PCTP-201ENST00000268896 AP2S1P53680 142 aaPredicted RBP13.23□□□□□ -0.29
PCTP-201ENST00000268896 S100A10P60903 97 aa13.23□□□□□ -0.29
PCTP-201ENST00000268896 SRPXP78539 464 aa13.23□□□□□ -0.29
PCTP-201ENST00000268896 EIF4EBP1Q13541 118 aaPredicted RBP13.23□□□□□ -0.29
PCTP-201ENST00000268896 SSBP3Q9BWW4 388 aaPredicted RBP13.23□□□□□ -0.29
PCTP-201ENST00000268896 TNFSF18Q9UNG2 199 aa13.23□□□□□ -0.29
PCTP-201ENST00000268896 SPG11Q96JI7 2443 aa13.23□□□□□ -0.29
PCTP-201ENST00000268896 CLEC18AA5D8T8 446 aa13.22□□□□□ -0.29
PCTP-201ENST00000268896 C17orf98A8MV24 154 aa13.22□□□□□ -0.29
PCTP-201ENST00000268896 KCNAB3O43448 404 aa13.22□□□□□ -0.29
PCTP-201ENST00000268896 CFDP00746 253 aaPredicted RBP13.22□□□□□ -0.29
PCTP-201ENST00000268896 IGKV1-39P01597 117 aa13.22□□□□□ -0.29
PCTP-201ENST00000268896 IGKV1D-39P04432 117 aa13.22□□□□□ -0.29
PCTP-201ENST00000268896 EPHA1P21709 976 aa13.22□□□□□ -0.29
PCTP-201ENST00000268896 RAB7AP51149 207 aa13.22□□□□□ -0.29
PCTP-201ENST00000268896 ATP5J2P56134 94 aa13.22□□□□□ -0.29
PCTP-201ENST00000268896 IZUMO4Q1ZYL8 232 aa13.22□□□□□ -0.29
PCTP-201ENST00000268896 ZNF585BQ52M93 769 aa13.22□□□□□ -0.29
PCTP-201ENST00000268896 CLEC18CQ8NCF0 446 aa13.22□□□□□ -0.29
PCTP-201ENST00000268896 OR52M1Q8NGK5 317 aa13.22□□□□□ -0.29
PCTP-201ENST00000268896 RBPMSQ93062 196 aaKnown RBP13.22□□□□□ -0.29
PCTP-201ENST00000268896 MBD2Q9UBB5 411 aa13.22□□□□□ -0.29
PCTP-201ENST00000268896 TENM4Q6N022 2769 aa13.22□□□□□ -0.29
PCTP-201ENST00000268896 RNF212BA8MTL3 300 aa13.22□□□□□ -0.29
PCTP-201ENST00000268896 NXPH3O95157 252 aa13.22□□□□□ -0.29
PCTP-201ENST00000268896 IFNA7P01567 189 aa13.22□□□□□ -0.29
PCTP-201ENST00000268896 IGHV1-8P0DP01 117 aa13.22□□□□□ -0.29
PCTP-201ENST00000268896 PDLIM4P50479 330 aa13.22□□□□□ -0.29
PCTP-201ENST00000268896 CATR1Q13166 79 aa13.22□□□□□ -0.29
PCTP-201ENST00000268896 RAB32Q13637 225 aa13.22□□□□□ -0.29
PCTP-201ENST00000268896 EXOSC2Q13868 293 aaKnown RBP13.22□□□□□ -0.29
PCTP-201ENST00000268896 ESCO2Q56NI9 601 aa13.22□□□□□ -0.29
PCTP-201ENST00000268896 ODF3L1Q8IXM7 274 aa13.22□□□□□ -0.29
PCTP-201ENST00000268896 SPAG16Q8N0X2 631 aa13.22□□□□□ -0.29
PCTP-201ENST00000268896 RNASE11Q8TAA1 199 aaKnown RBP13.22□□□□□ -0.29
PCTP-201ENST00000268896 ASH1LQ9NR48 2969 aaKnown RBP13.21□□□□□ -0.29
PCTP-201ENST00000268896 NBPF19A0A087WUL8 3843 aa13.21□□□□□ -0.29
PCTP-201ENST00000268896 A0A0G2JRQ6 117 aa13.21□□□□□ -0.29
PCTP-201ENST00000268896 DUTP33316 252 aaKnown RBP13.21□□□□□ -0.29
PCTP-201ENST00000268896 LPAR6P43657 344 aa13.21□□□□□ -0.29
PCTP-201ENST00000268896 NCR3LG1Q68D85 454 aa13.21□□□□□ -0.29
PCTP-201ENST00000268896 ZNF787Q6DD87 383 aa13.21□□□□□ -0.29
PCTP-201ENST00000268896 HIST2H2BCQ6DN03 193 aa13.21□□□□□ -0.29
PCTP-201ENST00000268896 SLC25A48Q6ZT89 311 aaKnown RBP13.21□□□□□ -0.29
PCTP-201ENST00000268896 C11orf42Q8N5U0 333 aa13.21□□□□□ -0.29
PCTP-201ENST00000268896 LOC105371242A0A075B767 164 aa13.2□□□□□ -0.3
PCTP-201ENST00000268896 A0A0D9SG52 128 aa13.2□□□□□ -0.3
PCTP-201ENST00000268896 F5H0A9 414 aaPredicted RBP13.2□□□□□ -0.3
PCTP-201ENST00000268896 GPR37O15354 613 aa13.2□□□□□ -0.3
PCTP-201ENST00000268896 BRWD1-AS2P59051 145 aa13.2□□□□□ -0.3
PCTP-201ENST00000268896 KRTAP10-9P60411 292 aa13.2□□□□□ -0.3
PCTP-201ENST00000268896 OR10A7Q8NGE5 316 aa13.2□□□□□ -0.3
PCTP-201ENST00000268896 TMED3Q9Y3Q3 217 aa13.2□□□□□ -0.3
PCTP-201ENST00000268896 LSM5Q9Y4Y9 91 aaKnown RBP13.2□□□□□ -0.3
PCTP-201ENST00000268896 RAB29O14966 203 aa13.2□□□□□ -0.3
PCTP-201ENST00000268896 FCGR3BO75015 233 aa13.2□□□□□ -0.3
PCTP-201ENST00000268896 OR2F2O95006 317 aa13.2□□□□□ -0.3
PCTP-201ENST00000268896 IGHV2-5P01817 119 aa13.2□□□□□ -0.3
PCTP-201ENST00000268896 ZFP36P26651 326 aaKnown RBP13.2□□□□□ -0.3
PCTP-201ENST00000268896 AKR1C2P52895 323 aa13.2□□□□□ -0.3
PCTP-201ENST00000268896 ARF6P62330 175 aa13.2□□□□□ -0.3
PCTP-201ENST00000268896 LCN2P80188 198 aa13.2□□□□□ -0.3
PCTP-201ENST00000268896 IL15RAQ13261 267 aa13.2□□□□□ -0.3
PCTP-201ENST00000268896 OR2F1Q13607 317 aa13.2□□□□□ -0.3
PCTP-201ENST00000268896 ZNF345Q14585 488 aa13.2□□□□□ -0.3
PCTP-201ENST00000268896 TMEM30BQ3MIR4 351 aa13.2□□□□□ -0.3
PCTP-201ENST00000268896 ZNF66Q6ZN08 573 aa13.2□□□□□ -0.3
PCTP-201ENST00000268896 ACOT7LQ6ZUV0 252 aa13.2□□□□□ -0.3
PCTP-201ENST00000268896 OR8H3Q8N146 312 aa13.2□□□□□ -0.3
PCTP-201ENST00000268896 CLDND2Q8NHS1 167 aa13.2□□□□□ -0.3
PCTP-201ENST00000268896 HSD17B10Q99714 261 aaKnown RBP13.2□□□□□ -0.3
PCTP-201ENST00000268896 RNF126Q9BV68 326 aa13.2□□□□□ -0.3
PCTP-201ENST00000268896 UBQLN2Q9UHD9 624 aa13.2□□□□□ -0.3
PCTP-201ENST00000268896 USP9YO00507 2555 aaPredicted RBP13.2□□□□□ -0.3
PCTP-201ENST00000268896 FBN2P35556 2912 aa13.19□□□□□ -0.3
PCTP-201ENST00000268896 RNF222A6NCQ9 220 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms