RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 GPR12P47775 334 aa6.66□□□□□ -1.34
ERCC8-201ENST00000265038 TAS2R20P59543 309 aa6.66□□□□□ -1.34
ERCC8-201ENST00000265038 ACTBP60709 375 aa6.66□□□□□ -1.34
ERCC8-201ENST00000265038 TCTEX1D4Q5JR98 221 aa6.66□□□□□ -1.34
ERCC8-201ENST00000265038 CNIH2Q6PI25 160 aa6.66□□□□□ -1.34
ERCC8-201ENST00000265038 FAM131AQ6UXB0 335 aa6.66□□□□□ -1.34
ERCC8-201ENST00000265038 CENPVQ7Z7K6 275 aaPredicted RBP6.66□□□□□ -1.34
ERCC8-201ENST00000265038 OR5AU1Q8NGC0 362 aa6.66□□□□□ -1.34
ERCC8-201ENST00000265038 NOL4LQ96MY1 436 aaPredicted RBP6.66□□□□□ -1.34
ERCC8-201ENST00000265038 OR2D2Q9H210 308 aa6.66□□□□□ -1.34
ERCC8-201ENST00000265038 SDHAF2Q9NX18 166 aa6.66□□□□□ -1.34
ERCC8-201ENST00000265038 ANXA10Q9UJ72 324 aa6.66□□□□□ -1.34
ERCC8-201ENST00000265038 OR5H14A6NHG9 310 aa6.66□□□□□ -1.34
ERCC8-201ENST00000265038 M0QZ24 198 aa6.66□□□□□ -1.34
ERCC8-201ENST00000265038 HLA-DQB1P01920 261 aa6.66□□□□□ -1.34
ERCC8-201ENST00000265038 FCER2P06734 321 aa6.66□□□□□ -1.34
ERCC8-201ENST00000265038 NFYAP23511 347 aaPredicted RBP6.66□□□□□ -1.34
ERCC8-201ENST00000265038 MC5RP33032 325 aa6.66□□□□□ -1.34
ERCC8-201ENST00000265038 RPL5P46777 297 aaKnown RBP6.66□□□□□ -1.34
ERCC8-201ENST00000265038 SPCS2Q15005 226 aa6.66□□□□□ -1.34
ERCC8-201ENST00000265038 MMDQ15546 238 aa6.66□□□□□ -1.34
ERCC8-201ENST00000265038 TREML4Q6UXN2 200 aa6.66□□□□□ -1.34
ERCC8-201ENST00000265038 SLC35E3Q7Z769 313 aa6.66□□□□□ -1.34
ERCC8-201ENST00000265038 CLVS1Q8IUQ0 354 aaPredicted RBP6.66□□□□□ -1.34
ERCC8-201ENST00000265038 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.66□□□□□ -1.34
ERCC8-201ENST00000265038 BEST4Q8NFU0 473 aa6.66□□□□□ -1.34
ERCC8-201ENST00000265038 NPBQ8NG41 125 aa6.66□□□□□ -1.34
ERCC8-201ENST00000265038 ACOT12Q8WYK0 555 aa6.66□□□□□ -1.34
ERCC8-201ENST00000265038 CMTM3Q96MX0 182 aa6.66□□□□□ -1.34
ERCC8-201ENST00000265038 CITED2Q99967 270 aaPredicted RBP6.66□□□□□ -1.34
ERCC8-201ENST00000265038 RASL11BQ9BPW5 248 aa6.66□□□□□ -1.34
ERCC8-201ENST00000265038 HSPB9Q9BQS6 159 aa6.66□□□□□ -1.34
ERCC8-201ENST00000265038 LINC00527Q9UJ94 153 aa6.66□□□□□ -1.34
ERCC8-201ENST00000265038 MEIS3P1A6NDR6 274 aa6.65□□□□□ -1.35
ERCC8-201ENST00000265038 ADARB2-AS1A8MUL3 147 aa6.65□□□□□ -1.35
ERCC8-201ENST00000265038 J3QRK9 145 aa6.65□□□□□ -1.35
ERCC8-201ENST00000265038 M0R1X1 148 aa6.65□□□□□ -1.35
ERCC8-201ENST00000265038 NBR2O15453 112 aa6.65□□□□□ -1.35
ERCC8-201ENST00000265038 HPGDSO60760 199 aa6.65□□□□□ -1.35
ERCC8-201ENST00000265038 NDUFA3O95167 84 aa6.65□□□□□ -1.35
ERCC8-201ENST00000265038 TSPAN15O95858 294 aa6.65□□□□□ -1.35
ERCC8-201ENST00000265038 APOA1P02647 267 aa6.65□□□□□ -1.35
ERCC8-201ENST00000265038 ZNF182P17025 639 aaPredicted RBP6.65□□□□□ -1.35
ERCC8-201ENST00000265038 ELK1P19419 428 aa6.65□□□□□ -1.35
ERCC8-201ENST00000265038 CD83Q01151 205 aa6.65□□□□□ -1.35
ERCC8-201ENST00000265038 TMEM69Q5SWH9 247 aa6.65□□□□□ -1.35
ERCC8-201ENST00000265038 SNAPC3Q92966 411 aa6.65□□□□□ -1.35
ERCC8-201ENST00000265038 WASHC3Q9Y3C0 194 aa6.65□□□□□ -1.35
ERCC8-201ENST00000265038 OR2W1Q9Y3N9 320 aa6.65□□□□□ -1.35
ERCC8-201ENST00000265038 RBM7Q9Y580 266 aaKnown RBP6.65□□□□□ -1.35
ERCC8-201ENST00000265038 TENM1Q9UKZ4 2725 aa6.65□□□□□ -1.35
ERCC8-201ENST00000265038 IGKV1D-13A0A0B4J2D9 117 aa6.64□□□□□ -1.35
ERCC8-201ENST00000265038 TUSC2O75896 110 aa6.64□□□□□ -1.35
ERCC8-201ENST00000265038 IGLV2-14P01704 120 aa6.64□□□□□ -1.35
ERCC8-201ENST00000265038 IGKV1-16P04430 117 aa6.64□□□□□ -1.35
ERCC8-201ENST00000265038 IGKV1-13P0DP09 117 aa6.64□□□□□ -1.35
ERCC8-201ENST00000265038 CBX5P45973 191 aa6.64□□□□□ -1.35
ERCC8-201ENST00000265038 TMBIM6P55061 237 aa6.64□□□□□ -1.35
ERCC8-201ENST00000265038 ZNF329Q86UD4 541 aa6.64□□□□□ -1.35
ERCC8-201ENST00000265038 STPG2Q8N412 459 aa6.64□□□□□ -1.35
ERCC8-201ENST00000265038 ZNF107Q9UII5 783 aaPredicted RBP6.64□□□□□ -1.35
ERCC8-201ENST00000265038 ANAPC10Q9UM13 185 aa6.64□□□□□ -1.35
ERCC8-201ENST00000265038 PSMB11A5LHX3 300 aa6.64□□□□□ -1.35
ERCC8-201ENST00000265038 H7C2Y5 167 aa6.64□□□□□ -1.35
ERCC8-201ENST00000265038 CSF1P09603 554 aa6.64□□□□□ -1.35
ERCC8-201ENST00000265038 SOX6P35712 828 aa6.64□□□□□ -1.35
ERCC8-201ENST00000265038 LUMP51884 338 aaPredicted RBP6.64□□□□□ -1.35
ERCC8-201ENST00000265038 ARPC4P59998 168 aa6.64□□□□□ -1.35
ERCC8-201ENST00000265038 C5orf64Q2M2E5 130 aa6.64□□□□□ -1.35
ERCC8-201ENST00000265038 C2orf68Q2NKX9 166 aa6.64□□□□□ -1.35
ERCC8-201ENST00000265038 NSUN5P1Q3KNT7 163 aa6.64□□□□□ -1.35
ERCC8-201ENST00000265038 MZT2AQ6P582 158 aa6.64□□□□□ -1.35
ERCC8-201ENST00000265038 NDUFA11Q86Y39 141 aa6.64□□□□□ -1.35
ERCC8-201ENST00000265038 FOXRED2Q8IWF2 684 aa6.64□□□□□ -1.35
ERCC8-201ENST00000265038 RAB2BQ8WUD1 216 aa6.64□□□□□ -1.35
ERCC8-201ENST00000265038 CHPT1Q8WUD6 406 aa6.64□□□□□ -1.35
ERCC8-201ENST00000265038 RNF5Q99942 180 aa6.64□□□□□ -1.35
ERCC8-201ENST00000265038 FBXL15Q9H469 300 aa6.64□□□□□ -1.35
ERCC8-201ENST00000265038 MRPS7Q9Y2R9 242 aaKnown RBP6.64□□□□□ -1.35
ERCC8-201ENST00000265038 IGHV7-81A0A0B4J1V7 117 aa6.63□□□□□ -1.35
ERCC8-201ENST00000265038 AP4M1O00189 453 aa6.63□□□□□ -1.35
ERCC8-201ENST00000265038 FCN1O00602 326 aa6.63□□□□□ -1.35
ERCC8-201ENST00000265038 RRHO14718 337 aa6.63□□□□□ -1.35
ERCC8-201ENST00000265038 RBBP9O75884 186 aa6.63□□□□□ -1.35
ERCC8-201ENST00000265038 HLA-DRB1P01911 266 aa6.63□□□□□ -1.35
ERCC8-201ENST00000265038 NAT1P18440 290 aa6.63□□□□□ -1.35
ERCC8-201ENST00000265038 DUTP33316 252 aaKnown RBP6.63□□□□□ -1.35
ERCC8-201ENST00000265038 PRSS3P35030 304 aa6.63□□□□□ -1.35
ERCC8-201ENST00000265038 RPS16P62249 146 aaKnown RBP6.63□□□□□ -1.35
ERCC8-201ENST00000265038 PSG5Q15238 335 aa6.63□□□□□ -1.35
ERCC8-201ENST00000265038 LIN54Q6MZP7 749 aa6.63□□□□□ -1.35
ERCC8-201ENST00000265038 PDPNQ86YL7 162 aa6.63□□□□□ -1.35
ERCC8-201ENST00000265038 ZNF645Q8N7E2 425 aa6.63□□□□□ -1.35
ERCC8-201ENST00000265038 OR5AP2Q8NGF4 316 aa6.63□□□□□ -1.35
ERCC8-201ENST00000265038 FAM110DQ8TAY7 271 aaPredicted RBP6.63□□□□□ -1.35
ERCC8-201ENST00000265038 GPX8Q8TED1 209 aa6.63□□□□□ -1.35
ERCC8-201ENST00000265038 DDB2Q92466 427 aa6.63□□□□□ -1.35
ERCC8-201ENST00000265038 AP3S1Q92572 193 aa6.63□□□□□ -1.35
ERCC8-201ENST00000265038 BCL7BQ9BQE9 202 aa6.63□□□□□ -1.35
ERCC8-201ENST00000265038 MMP27Q9H306 513 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms