RNA–Protein interactions for RNA: ENST00000263946.7

PKP1-201, Transcript of plakophilin 1, humanhuman

TSL 5 BASIC

Gene PKP1, Length 5,447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-201ENST00000263946 MT-ND6P03923 174 aa9.97□□□□□ -0.81
PKP1-201ENST00000263946 LRRC75AQ8NAA5 344 aa9.97□□□□□ -0.81
PKP1-201ENST00000263946 DEFB108AA8MXU0 73 aa9.97□□□□□ -0.81
PKP1-201ENST00000263946 RFPL3SP0C7P2 107 aa9.97□□□□□ -0.81
PKP1-201ENST00000263946 ZNF883P0CG24 379 aa9.97□□□□□ -0.81
PKP1-201ENST00000263946 HOXA6P31267 233 aa9.97□□□□□ -0.81
PKP1-201ENST00000263946 NMUP48645 174 aa9.97□□□□□ -0.81
PKP1-201ENST00000263946 PSG5Q15238 335 aa9.97□□□□□ -0.81
PKP1-201ENST00000263946 PMCHL1Q16048 86 aa9.97□□□□□ -0.81
PKP1-201ENST00000263946 GABRA6Q16445 453 aa9.97□□□□□ -0.81
PKP1-201ENST00000263946 KCNMB1Q16558 191 aa9.97□□□□□ -0.81
PKP1-201ENST00000263946 MRGPRGQ86SM5 289 aa9.97□□□□□ -0.81
PKP1-201ENST00000263946 ALX4Q9H161 411 aaPredicted RBP9.97□□□□□ -0.81
PKP1-201ENST00000263946 TMEM140Q9NV12 185 aa9.97□□□□□ -0.81
PKP1-201ENST00000263946 SOX21Q9Y651 276 aaPredicted RBP9.97□□□□□ -0.81
PKP1-201ENST00000263946 FREM3P0C091 2139 aa9.97□□□□□ -0.81
PKP1-201ENST00000263946 IGKV1D-43A0A0B4J1Z2 117 aa9.96□□□□□ -0.81
PKP1-201ENST00000263946 F2RL2O00254 374 aa9.96□□□□□ -0.81
PKP1-201ENST00000263946 DNAL4O96015 105 aa9.96□□□□□ -0.81
PKP1-201ENST00000263946 AWAT1Q58HT5 328 aa9.96□□□□□ -0.81
PKP1-201ENST00000263946 SLC25A40Q8TBP6 338 aa9.96□□□□□ -0.81
PKP1-201ENST00000263946 RGP1Q92546 391 aaPredicted RBP9.96□□□□□ -0.81
PKP1-201ENST00000263946 MS4A3Q96HJ5 214 aa9.96□□□□□ -0.81
PKP1-201ENST00000263946 PRNDQ9UKY0 176 aa9.96□□□□□ -0.81
PKP1-201ENST00000263946 ZNF815PA8K554 130 aa9.96□□□□□ -0.81
PKP1-201ENST00000263946 PPYP01298 95 aa9.96□□□□□ -0.81
PKP1-201ENST00000263946 COMPP49747 757 aaPredicted RBP9.96□□□□□ -0.81
PKP1-201ENST00000263946 PRSS8Q16651 343 aa9.96□□□□□ -0.81
PKP1-201ENST00000263946 MPV17LQ2QL34 196 aa9.96□□□□□ -0.81
PKP1-201ENST00000263946 LGALSLQ3ZCW2 172 aaPredicted RBP9.96□□□□□ -0.81
PKP1-201ENST00000263946 HOGA1Q86XE5 327 aa9.96□□□□□ -0.81
PKP1-201ENST00000263946 OR8I2Q8N0Y5 310 aa9.96□□□□□ -0.81
PKP1-201ENST00000263946 MRGPRDQ8TDS7 321 aa9.96□□□□□ -0.81
PKP1-201ENST00000263946 RBFOX2O43251 390 aaKnown RBP eCLIP9.96□□□□□ -0.81
PKP1-201ENST00000263946 GHRHP01286 108 aa9.96□□□□□ -0.81
PKP1-201ENST00000263946 LRRC75BQ2VPJ9 315 aa9.96□□□□□ -0.81
PKP1-201ENST00000263946 C10orf113Q5VZT2 155 aa9.96□□□□□ -0.81
PKP1-201ENST00000263946 INO80CQ6PI98 192 aaPredicted RBP9.96□□□□□ -0.81
PKP1-201ENST00000263946 SLC35E3Q7Z769 313 aa9.96□□□□□ -0.81
PKP1-201ENST00000263946 MRPL30Q8TCC3 161 aaKnown RBP9.96□□□□□ -0.81
PKP1-201ENST00000263946 CXXC4Q9H2H0 198 aa9.96□□□□□ -0.81
PKP1-201ENST00000263946 FBLL1A6NHQ2 334 aaKnown RBP9.96□□□□□ -0.82
PKP1-201ENST00000263946 CXorf1O96002 111 aa9.96□□□□□ -0.82
PKP1-201ENST00000263946 FAM214BQ7L5A3 538 aa9.96□□□□□ -0.82
PKP1-201ENST00000263946 ZNF383Q8NA42 475 aa9.96□□□□□ -0.82
PKP1-201ENST00000263946 ADAD2Q8NCV1 583 aaKnown RBP9.96□□□□□ -0.82
PKP1-201ENST00000263946 LOC101059948A0A1B0GTJ6 334 aa9.96□□□□□ -0.82
PKP1-201ENST00000263946 SRSF10O75494 262 aaKnown RBP9.96□□□□□ -0.82
PKP1-201ENST00000263946 TCL1AP56279 114 aa9.96□□□□□ -0.82
PKP1-201ENST00000263946 BHLHA15Q7RTS1 189 aaPredicted RBP9.96□□□□□ -0.82
PKP1-201ENST00000263946 FAM3BP58499 235 aaPredicted RBP9.95□□□□□ -0.82
PKP1-201ENST00000263946 CALHM1Q8IU99 346 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 GBGT1Q8N5D6 347 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 FAM169BQ8N8A8 192 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 TRAV39A0A0B4J263 110 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 TRAV38-1A0A0B4J264 116 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 SNURFLB1AK76 121 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 VSIG10L2P0DP72 767 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 MAS1LP35410 378 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 MRPS11P82912 194 aaKnown RBP9.95□□□□□ -0.82
PKP1-201ENST00000263946 TNFAIP6P98066 277 aaPredicted RBP9.95□□□□□ -0.82
PKP1-201ENST00000263946 SNAI3Q3KNW1 292 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 OR4B1Q8NGF8 309 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 OR4P4Q8NGL7 312 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 VOPP1Q96AW1 172 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 SNX22Q96L94 193 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 SMDT1Q9H4I9 107 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 FUT9Q9Y231 359 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 TRDCB7Z8K6 153 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 UMODP07911 640 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 FAM157CP0CG43 387 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 NCMAPQ5T1S8 102 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 MRPL54Q6P161 138 aaKnown RBP9.95□□□□□ -0.82
PKP1-201ENST00000263946 TMEM105Q8N8V8 129 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 HEXA-AS1Q9H8Q6 139 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 IGHV3-43A0A0B4J1X8 118 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 A0A0G2JK05 382 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 CD74P04233 296 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 IGHV3-43DP0DP04 118 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 EFNB1P98172 346 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 HERPUD1Q15011 391 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 SEZ6L2Q6UXD5 910 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 R3HDM4Q96D70 268 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 PMCHL2Q9BQD1 86 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 COL6A6A6NMZ7 2263 aa9.95□□□□□ -0.82
PKP1-201ENST00000263946 LGALS3P17931 250 aaKnown RBP9.94□□□□□ -0.82
PKP1-201ENST00000263946 CDX1P47902 265 aaPredicted RBP9.94□□□□□ -0.82
PKP1-201ENST00000263946 RPS11P62280 158 aaKnown RBP eCLIP9.94□□□□□ -0.82
PKP1-201ENST00000263946 WDR25Q64LD2 544 aaPredicted RBP9.94□□□□□ -0.82
PKP1-201ENST00000263946 ASCL5Q7RTU5 278 aa9.94□□□□□ -0.82
PKP1-201ENST00000263946 FLYWCH2Q96CP2 140 aaKnown RBP9.94□□□□□ -0.82
PKP1-201ENST00000263946 PARD6GQ9BYG4 376 aaPredicted RBP9.94□□□□□ -0.82
PKP1-201ENST00000263946 VCX2Q9H322 139 aa9.94□□□□□ -0.82
PKP1-201ENST00000263946 ZIC3O60481 467 aa9.94□□□□□ -0.82
PKP1-201ENST00000263946 NPIPB7O75200 414 aa9.94□□□□□ -0.82
PKP1-201ENST00000263946 NAT2P11245 290 aa9.94□□□□□ -0.82
PKP1-201ENST00000263946 PAPPA-AS1Q5QFB9 102 aa9.94□□□□□ -0.82
PKP1-201ENST00000263946 ZBTB34Q8NCN2 500 aa9.94□□□□□ -0.82
PKP1-201ENST00000263946 VN1R17PQ8TDU5 208 aa9.94□□□□□ -0.82
PKP1-201ENST00000263946 CCL17Q92583 94 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms