RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 SLC25A40Q8TBP6 338 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 TAF15Q92804 592 aaKnown RBP eCLIP7.69□□□□□ -1.18
MSH4-201ENST00000263187 C1QTNF9BB2RNN3 333 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 FGF7P21781 194 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 CD81P60033 236 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 DEFA6Q01524 100 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 DHRS13Q6UX07 377 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 LINC00469Q8N7U9 141 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 KDF1Q8NAX2 398 aaPredicted RBP7.69□□□□□ -1.18
MSH4-201ENST00000263187 TMEM45BQ96B21 275 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 PACRGQ96M98 296 aaPredicted RBP7.69□□□□□ -1.18
MSH4-201ENST00000263187 PCGF1Q9BSM1 259 aa7.69□□□□□ -1.18
MSH4-201ENST00000263187 WDR61Q9GZS3 305 aaKnown RBP7.69□□□□□ -1.18
MSH4-201ENST00000263187 RIF1Q5UIP0 2472 aaKnown RBP7.68□□□□□ -1.18
MSH4-201ENST00000263187 IGKV3D-15A0A087WSY6 115 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 FAM90A10PA6NDY2 464 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 FAM90A18PA6NE21 464 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 FAM90A16PA6NEW6 464 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 FAM90A20PA6NIJ5 464 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 FAM90A8PA6NJQ4 464 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 FAM90A7PA6NKC0 464 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 FAM90A22PA8MWA6 464 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 FAM90A12PA8MX19 464 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 FAM90A5PA8MXJ8 464 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 FAM90A23PA8MXZ1 464 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 SEC14L6B5MCN3 397 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 ST8SIA5O15466 376 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 PAGE4O60829 102 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 FAM90A15PP0C7V4 464 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 FAM90A13PP0C7W8 464 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 FAM90A14PP0C7W9 464 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 FAM90A24PP0C7X0 464 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 MPV17P39210 176 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 FAM3BP58499 235 aaPredicted RBP7.68□□□□□ -1.18
MSH4-201ENST00000263187 LRRC75BQ2VPJ9 315 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 NCR3LG1Q68D85 454 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 Q6ZR03 302 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 C1QL4Q86Z23 238 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 C5orf30Q96GV9 206 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 SDF2L1Q9HCN8 221 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 WASF3Q9UPY6 502 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 TRAV38-1A0A0B4J264 116 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 A0A1B0GUS0 222 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 J3QT63 122 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 GZMHP20718 246 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 PPP1CBP62140 327 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 TGFBR3Q03167 851 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 FFAR4Q5NUL3 377 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 Q6ZS49 121 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 PCNX1Q96RV3 2341 aa7.68□□□□□ -1.18
MSH4-201ENST00000263187 CISD1Q9NZ45 108 aaKnown RBP7.68□□□□□ -1.18
MSH4-201ENST00000263187 ODAMA1E959 279 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 C12orf77C9JDV5 145 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 RNF224P0DH78 156 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 CEACAM1P13688 526 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 HOXA6P31267 233 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 EDDM3BP56851 147 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 COL10A1Q03692 680 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 TMEM41BQ5BJD5 291 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 CST9LP1Q5W188 147 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 ZNF497Q6ZNH5 498 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 SAXO1Q8IYX7 474 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 OR10G4Q8NGN3 311 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 OR10G9Q8NGN4 311 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 OR10G7Q8NGN6 311 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 OR4X1Q8NH49 305 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 RTL8AQ9BWD3 113 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 PATZ1Q9HBE1 687 aaKnown RBP7.67□□□□□ -1.18
MSH4-201ENST00000263187 CDH20Q9HBT6 801 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 VAX2Q9UIW0 290 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 PSG11Q9UQ72 335 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 A0A087WWC5 75 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 A0A1B0GV90 55 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 HAND1O96004 215 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 CYB5R3P00387 301 aaPredicted RBP7.67□□□□□ -1.18
MSH4-201ENST00000263187 IGHEP01854 428 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 CYC1P08574 325 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 GPX4P36969 197 aaPredicted RBP7.67□□□□□ -1.18
MSH4-201ENST00000263187 TNFRSF9Q07011 255 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 PSG7Q13046 419 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 SRSF6Q13247 344 aaKnown RBP7.67□□□□□ -1.18
MSH4-201ENST00000263187 SLC10A1Q14973 349 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 OR8G1Q15617 311 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 Q3ZCU0 254 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 LEAP2Q969E1 77 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 DERL1Q9BUN8 251 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 RIMS4Q9H426 269 aaPredicted RBP7.67□□□□□ -1.18
MSH4-201ENST00000263187 SMDT1Q9H4I9 107 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 PRDM13Q9H4Q3 707 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 LIN7CQ9NUP9 197 aaKnown RBP7.67□□□□□ -1.18
MSH4-201ENST00000263187 GFOD1Q9NXC2 390 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 MPC1Q9Y5U8 109 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 DUXBA0A1W2PPF3 345 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 LRP5LA4QPB2 252 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 OR5B21A6NL26 309 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 SH2D1BO14796 132 aa7.67□□□□□ -1.18
MSH4-201ENST00000263187 UBE2NP61088 152 aaKnown RBP7.67□□□□□ -1.18
MSH4-201ENST00000263187 MEF2BQ02080 365 aaPredicted RBP7.67□□□□□ -1.18
MSH4-201ENST00000263187 SP5Q6BEB4 398 aaPredicted RBP7.67□□□□□ -1.18
MSH4-201ENST00000263187 ZNF66Q6ZN08 573 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms