RNA–Protein interactions for RNA: ENST00000261407.8

LPCAT3-201, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT3, Length 2,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-201ENST00000261407 YPEL4Q96NS1 127 aa16.08■□□□□ 0.16
LPCAT3-201ENST00000261407 URGCP-MRPS24S4R325 110 aa16.08■□□□□ 0.16
LPCAT3-201ENST00000261407 IGHV3-13P01766 116 aa16.07■□□□□ 0.16
LPCAT3-201ENST00000261407 IGHV3-7P01780 117 aa16.07■□□□□ 0.16
LPCAT3-201ENST00000261407 HSPB1P04792 205 aaKnown RBP16.07■□□□□ 0.16
LPCAT3-201ENST00000261407 ACAA1P09110 424 aaPredicted RBP16.07■□□□□ 0.16
LPCAT3-201ENST00000261407 EGR1P18146 543 aa16.07■□□□□ 0.16
LPCAT3-201ENST00000261407 BEND4Q6ZU67 534 aa16.07■□□□□ 0.16
LPCAT3-201ENST00000261407 RPRMLQ8N4K4 120 aa16.07■□□□□ 0.16
LPCAT3-201ENST00000261407 TCTEX1D2Q8WW35 142 aa16.07■□□□□ 0.16
LPCAT3-201ENST00000261407 SARAFQ96BY9 339 aa16.07■□□□□ 0.16
LPCAT3-201ENST00000261407 WDR61Q9GZS3 305 aaKnown RBP16.07■□□□□ 0.16
LPCAT3-201ENST00000261407 ZNF71Q9NQZ8 489 aaPredicted RBP16.07■□□□□ 0.16
LPCAT3-201ENST00000261407 PLSCR4Q9NRQ2 329 aa16.07■□□□□ 0.16
LPCAT3-201ENST00000261407 MAP1BP46821 2468 aaKnown RBP16.07■□□□□ 0.16
LPCAT3-201ENST00000261407 RBMXL1Q96E39 390 aaKnown RBP16.07■□□□□ 0.16
LPCAT3-201ENST00000261407 RCC1LQ96I51 464 aaKnown RBP16.07■□□□□ 0.16
LPCAT3-201ENST00000261407 DUSP13Q9UII6 198 aa16.07■□□□□ 0.16
LPCAT3-201ENST00000261407 LOC102723971A0A1B0GUV8 181 aa16.06■□□□□ 0.16
LPCAT3-201ENST00000261407 HMGB3O15347 200 aaKnown RBP16.06■□□□□ 0.16
LPCAT3-201ENST00000261407 IGKV1D-33P01593 117 aa16.06■□□□□ 0.16
LPCAT3-201ENST00000261407 IGKV1-33P01594 117 aa16.06■□□□□ 0.16
LPCAT3-201ENST00000261407 P0C879 139 aa16.06■□□□□ 0.16
LPCAT3-201ENST00000261407 KITLGP21583 273 aa16.06■□□□□ 0.16
LPCAT3-201ENST00000261407 SLC38A11Q08AI6 406 aa16.06■□□□□ 0.16
LPCAT3-201ENST00000261407 ZNF787Q6DD87 383 aa16.06■□□□□ 0.16
LPCAT3-201ENST00000261407 OR2Z1Q8NG97 314 aa16.06■□□□□ 0.16
LPCAT3-201ENST00000261407 LRRC29Q8WV35 223 aa16.06■□□□□ 0.16
LPCAT3-201ENST00000261407 NINJ1Q92982 152 aa16.06■□□□□ 0.16
LPCAT3-201ENST00000261407 MUCL1Q96DR8 90 aa16.06■□□□□ 0.16
LPCAT3-201ENST00000261407 PPIHO43447 177 aaKnown RBP16.06■□□□□ 0.16
LPCAT3-201ENST00000261407 ZG16O60844 167 aa16.06■□□□□ 0.16
LPCAT3-201ENST00000261407 CGAP01215 116 aa16.06■□□□□ 0.16
LPCAT3-201ENST00000261407 IGLV1-44P01699 117 aa16.06■□□□□ 0.16
LPCAT3-201ENST00000261407 GCH1P30793 250 aa16.06■□□□□ 0.16
LPCAT3-201ENST00000261407 RAB11AP62491 216 aa16.06■□□□□ 0.16
LPCAT3-201ENST00000261407 HBG1P69891 147 aa16.06■□□□□ 0.16
LPCAT3-201ENST00000261407 HBG2P69892 147 aa16.06■□□□□ 0.16
LPCAT3-201ENST00000261407 ZNF718Q3SXZ3 478 aa16.06■□□□□ 0.16
LPCAT3-201ENST00000261407 DPPA3Q6W0C5 159 aa16.06■□□□□ 0.16
LPCAT3-201ENST00000261407 PSG11Q9UQ72 335 aa16.06■□□□□ 0.16
LPCAT3-201ENST00000261407 PIGBOS1A0A0B4J2F0 54 aa16.05■□□□□ 0.16
LPCAT3-201ENST00000261407 RNF212BA8MTL3 300 aa16.05■□□□□ 0.16
LPCAT3-201ENST00000261407 HBE1P02100 147 aa16.05■□□□□ 0.16
LPCAT3-201ENST00000261407 S100A6P06703 90 aa16.05■□□□□ 0.16
LPCAT3-201ENST00000261407 Q3ZCU0 254 aa16.05■□□□□ 0.16
LPCAT3-201ENST00000261407 TMEM14EPQ6UXP3 125 aa16.05■□□□□ 0.16
LPCAT3-201ENST00000261407 HIPK2Q9H2X6 1198 aa16.05■□□□□ 0.16
LPCAT3-201ENST00000261407 HSPB7Q9UBY9 170 aa16.05■□□□□ 0.16
LPCAT3-201ENST00000261407 ZNF292O60281 2723 aa16.05■□□□□ 0.16
LPCAT3-201ENST00000261407 IGHV3OR15-7A0A075B7D8 119 aa16.05■□□□□ 0.16
LPCAT3-201ENST00000261407 LRRC30A6NM36 301 aa16.05■□□□□ 0.16
LPCAT3-201ENST00000261407 HOXB1P14653 301 aaPredicted RBP16.05■□□□□ 0.16
LPCAT3-201ENST00000261407 MEOX2P50222 304 aa16.05■□□□□ 0.16
LPCAT3-201ENST00000261407 RAB2AP61019 212 aa16.05■□□□□ 0.16
LPCAT3-201ENST00000261407 FABP9Q0Z7S8 132 aa16.05■□□□□ 0.16
LPCAT3-201ENST00000261407 KHDC3LQ587J8 217 aa16.05■□□□□ 0.16
LPCAT3-201ENST00000261407 C1orf162Q8NEQ5 155 aaPredicted RBP16.05■□□□□ 0.16
LPCAT3-201ENST00000261407 SNIP1Q8TAD8 396 aaKnown RBP16.05■□□□□ 0.16
LPCAT3-201ENST00000261407 TAF15Q92804 592 aaKnown RBP eCLIP16.05■□□□□ 0.16
LPCAT3-201ENST00000261407 AGMATQ9BSE5 352 aa16.05■□□□□ 0.16
LPCAT3-201ENST00000261407 CEP250Q9BV73 2442 aa16.04■□□□□ 0.16
LPCAT3-201ENST00000261407 TRAV1-1A0A0B4J248 108 aa16.04■□□□□ 0.16
LPCAT3-201ENST00000261407 PROP1O75360 226 aa16.04■□□□□ 0.16
LPCAT3-201ENST00000261407 CXCL1P09341 107 aa16.04■□□□□ 0.16
LPCAT3-201ENST00000261407 UTF1Q5T230 341 aa16.04■□□□□ 0.16
LPCAT3-201ENST00000261407 FAM90A2PQ658T7 463 aa16.04■□□□□ 0.16
LPCAT3-201ENST00000261407 HEPN1Q6WQI6 88 aa16.04■□□□□ 0.16
LPCAT3-201ENST00000261407 IQCF2Q8IXL9 164 aa16.04■□□□□ 0.16
LPCAT3-201ENST00000261407 PROCRQ9UNN8 238 aa16.04■□□□□ 0.16
LPCAT3-201ENST00000261407 NQO2P16083 231 aa16.03■□□□□ 0.16
LPCAT3-201ENST00000261407 ZNF83P51522 516 aa16.03■□□□□ 0.16
LPCAT3-201ENST00000261407 ERVFRD-1P60508 538 aa16.03■□□□□ 0.16
LPCAT3-201ENST00000261407 BHLHA15Q7RTS1 189 aaPredicted RBP16.03■□□□□ 0.16
LPCAT3-201ENST00000261407 RPP25LQ8N5L8 163 aaKnown RBP16.03■□□□□ 0.16
LPCAT3-201ENST00000261407 PRR7Q8TB68 274 aa16.03■□□□□ 0.16
LPCAT3-201ENST00000261407 NIPSNAP3BQ9BS92 247 aa16.03■□□□□ 0.16
LPCAT3-201ENST00000261407 PSMG3Q9BT73 122 aaPredicted RBP16.03■□□□□ 0.16
LPCAT3-201ENST00000261407 UNKLQ9H9P5 680 aaKnown RBP16.03■□□□□ 0.16
LPCAT3-201ENST00000261407 RIF1Q5UIP0 2472 aaKnown RBP16.03■□□□□ 0.16
LPCAT3-201ENST00000261407 C15orf65H3BRN8 121 aa16.03■□□□□ 0.16
LPCAT3-201ENST00000261407 IFNA4P05014 189 aa16.03■□□□□ 0.16
LPCAT3-201ENST00000261407 DEFA4P12838 97 aa16.03■□□□□ 0.16
LPCAT3-201ENST00000261407 PRDX2P32119 198 aa16.03■□□□□ 0.16
LPCAT3-201ENST00000261407 SMIM21Q3B7S5 101 aa16.03■□□□□ 0.16
LPCAT3-201ENST00000261407 Q8WTZ3 238 aa16.03■□□□□ 0.16
LPCAT3-201ENST00000261407 TVP23CQ96ET8 276 aa16.03■□□□□ 0.16
LPCAT3-201ENST00000261407 IGKV1D-17A0A075B6S4 117 aa16.02■□□□□ 0.16
LPCAT3-201ENST00000261407 RBMXL2O75526 392 aaKnown RBP16.02■□□□□ 0.16
LPCAT3-201ENST00000261407 BCL2P10415 239 aa16.02■□□□□ 0.16
LPCAT3-201ENST00000261407 MBNL2Q5VZF2 373 aaKnown RBP16.02■□□□□ 0.16
LPCAT3-201ENST00000261407 ACSM6Q6P461 480 aa16.02■□□□□ 0.16
LPCAT3-201ENST00000261407 ZBTB34Q8NCN2 500 aa16.02■□□□□ 0.16
LPCAT3-201ENST00000261407 MBD3L1Q8WWY6 194 aa16.02■□□□□ 0.16
LPCAT3-201ENST00000261407 TMPRSS5Q9H3S3 457 aa16.02■□□□□ 0.16
LPCAT3-201ENST00000261407 SLC25A15Q9Y619 301 aa16.02■□□□□ 0.16
LPCAT3-201ENST00000261407 PMS2P5A8MQ11 134 aa16.02■□□□□ 0.15
LPCAT3-201ENST00000261407 UBE2CO00762 179 aa16.02■□□□□ 0.15
LPCAT3-201ENST00000261407 RPS10P46783 165 aaKnown RBP16.02■□□□□ 0.15
LPCAT3-201ENST00000261407 ELOBQ15370 118 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms