RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 PSMG3Q9BT73 122 aaPredicted RBP14.35□□□□□ -0.11
FOXA1-201ENST00000250448 REPIN1Q9BWE0 567 aaKnown RBP14.35□□□□□ -0.11
FOXA1-201ENST00000250448 CLCF1Q9UBD9 225 aa14.35□□□□□ -0.11
FOXA1-201ENST00000250448 RNF150Q9ULK6 438 aa14.35□□□□□ -0.11
FOXA1-201ENST00000250448 ATRXP46100 2492 aa14.35□□□□□ -0.11
FOXA1-201ENST00000250448 TRBV24-1A0A075B6N3 115 aa14.35□□□□□ -0.11
FOXA1-201ENST00000250448 AQP7O14520 342 aa14.35□□□□□ -0.11
FOXA1-201ENST00000250448 PHOX2AO14813 284 aa14.35□□□□□ -0.11
FOXA1-201ENST00000250448 ZNF324BQ6AW86 544 aaPredicted RBP14.35□□□□□ -0.11
FOXA1-201ENST00000250448 ZNF525Q8N782 197 aa14.35□□□□□ -0.11
FOXA1-201ENST00000250448 C9orf106Q8NAJ2 232 aa14.35□□□□□ -0.11
FOXA1-201ENST00000250448 P2RX4Q99571 388 aa14.35□□□□□ -0.11
FOXA1-201ENST00000250448 LINC00470Q9BZP3 86 aa14.35□□□□□ -0.11
FOXA1-201ENST00000250448 PIGBOS1A0A0B4J2F0 54 aa14.34□□□□□ -0.11
FOXA1-201ENST00000250448 A0A1W2PR80 420 aa14.34□□□□□ -0.11
FOXA1-201ENST00000250448 OPN1MWP04001 364 aa14.34□□□□□ -0.11
FOXA1-201ENST00000250448 OPN1MW2P0DN77 364 aa14.34□□□□□ -0.11
FOXA1-201ENST00000250448 OPN1MW3P0DN78 364 aa14.34□□□□□ -0.11
FOXA1-201ENST00000250448 IAPPP10997 89 aa14.34□□□□□ -0.11
FOXA1-201ENST00000250448 CEACAM21Q3KPI0 293 aa14.34□□□□□ -0.11
FOXA1-201ENST00000250448 MKXQ8IYA7 352 aa14.34□□□□□ -0.11
FOXA1-201ENST00000250448 OR2W1Q9Y3N9 320 aa14.34□□□□□ -0.11
FOXA1-201ENST00000250448 PGA5P0DJD9 388 aa14.34□□□□□ -0.11
FOXA1-201ENST00000250448 FOXF2Q12947 444 aa14.34□□□□□ -0.11
FOXA1-201ENST00000250448 C20orf204Q6ZNR8 217 aa14.34□□□□□ -0.11
FOXA1-201ENST00000250448 Q6ZRM9 215 aa14.34□□□□□ -0.11
FOXA1-201ENST00000250448 MRPL21Q7Z2W9 205 aaKnown RBP14.34□□□□□ -0.11
FOXA1-201ENST00000250448 SNX22Q96L94 193 aa14.34□□□□□ -0.11
FOXA1-201ENST00000250448 PACRGQ96M98 296 aaPredicted RBP14.34□□□□□ -0.11
FOXA1-201ENST00000250448 CABLES2Q9BTV7 478 aa14.34□□□□□ -0.11
FOXA1-201ENST00000250448 CACNG5Q9UF02 275 aa14.34□□□□□ -0.11
FOXA1-201ENST00000250448 OR14J1Q9UGF5 321 aa14.34□□□□□ -0.11
FOXA1-201ENST00000250448 PKIAP61925 76 aa14.33□□□□□ -0.11
FOXA1-201ENST00000250448 ARL16Q0P5N6 197 aa14.33□□□□□ -0.11
FOXA1-201ENST00000250448 TBR1Q16650 682 aa14.33□□□□□ -0.11
FOXA1-201ENST00000250448 SARAFQ96BY9 339 aa14.33□□□□□ -0.11
FOXA1-201ENST00000250448 OPN3Q9H1Y3 402 aaPredicted RBP14.33□□□□□ -0.11
FOXA1-201ENST00000250448 SSUH2Q9Y2M2 353 aa14.33□□□□□ -0.11
FOXA1-201ENST00000250448 CEBPZOSA8MTT3 80 aa14.33□□□□□ -0.12
FOXA1-201ENST00000250448 SYNGR1O43759 233 aa14.33□□□□□ -0.12
FOXA1-201ENST00000250448 SYNGR2O43760 224 aa14.33□□□□□ -0.12
FOXA1-201ENST00000250448 IL18BPO95998 194 aa14.33□□□□□ -0.12
FOXA1-201ENST00000250448 METTL15P1P0C7V9 234 aa14.33□□□□□ -0.12
FOXA1-201ENST00000250448 MDH2P40926 338 aaKnown RBP14.33□□□□□ -0.12
FOXA1-201ENST00000250448 ACSF3Q4G176 576 aaPredicted RBP14.33□□□□□ -0.12
FOXA1-201ENST00000250448 ZGRF1Q86YA3 2104 aa14.33□□□□□ -0.12
FOXA1-201ENST00000250448 C17orf78Q8N4C9 275 aa14.33□□□□□ -0.12
FOXA1-201ENST00000250448 RPRMLQ8N4K4 120 aa14.33□□□□□ -0.12
FOXA1-201ENST00000250448 OR10J5Q8NHC4 309 aa14.33□□□□□ -0.12
FOXA1-201ENST00000250448 MEGF10Q96KG7 1140 aa14.33□□□□□ -0.12
FOXA1-201ENST00000250448 CTDSP1Q9GZU7 261 aa14.33□□□□□ -0.12
FOXA1-201ENST00000250448 CDH20Q9HBT6 801 aa14.33□□□□□ -0.12
FOXA1-201ENST00000250448 PSENENQ9NZ42 101 aa14.33□□□□□ -0.12
FOXA1-201ENST00000250448 VAX2Q9UIW0 290 aa14.33□□□□□ -0.12
FOXA1-201ENST00000250448 TCAPO15273 167 aa14.32□□□□□ -0.12
FOXA1-201ENST00000250448 FAM87AP0C7U9 286 aa14.32□□□□□ -0.12
FOXA1-201ENST00000250448 VWA1Q6PCB0 445 aa14.32□□□□□ -0.12
FOXA1-201ENST00000250448 HAPLN4Q86UW8 402 aa14.32□□□□□ -0.12
FOXA1-201ENST00000250448 HIST1H2BLQ99880 126 aa14.32□□□□□ -0.12
FOXA1-201ENST00000250448 TRBV6-6A0A0A6YYG2 114 aa14.32□□□□□ -0.12
FOXA1-201ENST00000250448 K7ENP7 123 aa14.32□□□□□ -0.12
FOXA1-201ENST00000250448 IFNA1P01562 189 aa14.32□□□□□ -0.12
FOXA1-201ENST00000250448 IGKV1-39P01597 117 aa14.32□□□□□ -0.12
FOXA1-201ENST00000250448 IGKV1D-39P04432 117 aa14.32□□□□□ -0.12
FOXA1-201ENST00000250448 ZNF880Q6PDB4 577 aa14.32□□□□□ -0.12
FOXA1-201ENST00000250448 INO80CQ6PI98 192 aaPredicted RBP14.32□□□□□ -0.12
FOXA1-201ENST00000250448 REC114Q7Z4M0 266 aa14.32□□□□□ -0.12
FOXA1-201ENST00000250448 MRGPRGQ86SM5 289 aa14.32□□□□□ -0.12
FOXA1-201ENST00000250448 LSM10Q969L4 123 aaKnown RBP14.32□□□□□ -0.12
FOXA1-201ENST00000250448 ERRFI1Q9UJM3 462 aaPredicted RBP14.32□□□□□ -0.12
FOXA1-201ENST00000250448 PITPNC1Q9UKF7 332 aa14.32□□□□□ -0.12
FOXA1-201ENST00000250448 SMCO3A2RU48 225 aa14.32□□□□□ -0.12
FOXA1-201ENST00000250448 MAP1LC3B2A6NCE7 125 aa14.32□□□□□ -0.12
FOXA1-201ENST00000250448 CD300LBA8K4G0 201 aa14.32□□□□□ -0.12
FOXA1-201ENST00000250448 WNT2P09544 360 aa14.32□□□□□ -0.12
FOXA1-201ENST00000250448 MDKP21741 143 aaPredicted RBP14.32□□□□□ -0.12
FOXA1-201ENST00000250448 NRN1LQ496H8 165 aa14.32□□□□□ -0.12
FOXA1-201ENST00000250448 TMEM41BQ5BJD5 291 aa14.32□□□□□ -0.12
FOXA1-201ENST00000250448 FBXW9Q5XUX1 488 aa14.32□□□□□ -0.12
FOXA1-201ENST00000250448 GMPPAQ96IJ6 420 aaPredicted RBP14.32□□□□□ -0.12
FOXA1-201ENST00000250448 MAP1LC3BQ9GZQ8 125 aa14.32□□□□□ -0.12
FOXA1-201ENST00000250448 CHD3Q12873 2000 aaKnown RBP14.31□□□□□ -0.12
FOXA1-201ENST00000250448 TSTD3H0UI37 97 aa14.31□□□□□ -0.12
FOXA1-201ENST00000250448 LYZL6O75951 148 aa14.31□□□□□ -0.12
FOXA1-201ENST00000250448 DDTP30046 118 aa14.31□□□□□ -0.12
FOXA1-201ENST00000250448 SERF2P84101 59 aa14.31□□□□□ -0.12
FOXA1-201ENST00000250448 LRRC75BQ2VPJ9 315 aa14.31□□□□□ -0.12
FOXA1-201ENST00000250448 FAM180AQ6UWF9 173 aa14.31□□□□□ -0.12
FOXA1-201ENST00000250448 LINC00596Q86U02 117 aa14.31□□□□□ -0.12
FOXA1-201ENST00000250448 RDH5Q92781 318 aa14.31□□□□□ -0.12
FOXA1-201ENST00000250448 PRO1933Q9H354 126 aa14.31□□□□□ -0.12
FOXA1-201ENST00000250448 PLK3Q9H4B4 646 aa14.31□□□□□ -0.12
FOXA1-201ENST00000250448 TPRP12270 2363 aaKnown RBP14.31□□□□□ -0.12
FOXA1-201ENST00000250448 C5orf49A4QMS7 147 aa14.31□□□□□ -0.12
FOXA1-201ENST00000250448 IFNA10P01566 189 aa14.31□□□□□ -0.12
FOXA1-201ENST00000250448 HBG1P69891 147 aa14.31□□□□□ -0.12
FOXA1-201ENST00000250448 HBG2P69892 147 aa14.31□□□□□ -0.12
FOXA1-201ENST00000250448 WDR25Q64LD2 544 aaPredicted RBP14.31□□□□□ -0.12
FOXA1-201ENST00000250448 OR10V1Q8NGI7 309 aa14.31□□□□□ -0.12
FOXA1-201ENST00000250448 ZNF488Q96MN9 340 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms