RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 ZNF788Q6ZQV5 615 aa19.01■□□□□ 0.63
HOXD9-201ENST00000249499 ZNF295-AS1Q8N0V1 137 aa19.01■□□□□ 0.63
HOXD9-201ENST00000249499 HSD17B11Q8NBQ5 300 aa19.01■□□□□ 0.63
HOXD9-201ENST00000249499 CALYQ9NYX4 217 aa19.01■□□□□ 0.63
HOXD9-201ENST00000249499 PIEZO2Q9H5I5 2752 aa19.01■□□□□ 0.63
HOXD9-201ENST00000249499 ASCL1P50553 236 aa19■□□□□ 0.63
HOXD9-201ENST00000249499 EDDM3BP56851 147 aa19■□□□□ 0.63
HOXD9-201ENST00000249499 KLRB1Q12918 225 aa19■□□□□ 0.63
HOXD9-201ENST00000249499 MIDNQ504T8 468 aa19■□□□□ 0.63
HOXD9-201ENST00000249499 C10orf91Q5T1B1 145 aa19■□□□□ 0.63
HOXD9-201ENST00000249499 RAB29O14966 203 aa18.99■□□□□ 0.63
HOXD9-201ENST00000249499 ST8SIA5O15466 376 aa18.99■□□□□ 0.63
HOXD9-201ENST00000249499 RAMP3O60896 148 aa18.99■□□□□ 0.63
HOXD9-201ENST00000249499 OMGP23515 440 aa18.99■□□□□ 0.63
HOXD9-201ENST00000249499 GPR12P47775 334 aa18.99■□□□□ 0.63
HOXD9-201ENST00000249499 RAB7AP51149 207 aa18.99■□□□□ 0.63
HOXD9-201ENST00000249499 FAM53AQ6NSI3 398 aaPredicted RBP18.99■□□□□ 0.63
HOXD9-201ENST00000249499 GAFA1Q96PS6 74 aa18.99■□□□□ 0.63
HOXD9-201ENST00000249499 EGLN1Q9GZT9 426 aa18.99■□□□□ 0.63
HOXD9-201ENST00000249499 ESRP2Q9H6T0 727 aaKnown RBP18.99■□□□□ 0.63
HOXD9-201ENST00000249499 HSPB7Q9UBY9 170 aa18.99■□□□□ 0.63
HOXD9-201ENST00000249499 C17orf98A8MV24 154 aa18.99■□□□□ 0.63
HOXD9-201ENST00000249499 CST7O76096 145 aa18.99■□□□□ 0.63
HOXD9-201ENST00000249499 NXPH3O95157 252 aa18.99■□□□□ 0.63
HOXD9-201ENST00000249499 CYB5R3P00387 301 aaPredicted RBP18.99■□□□□ 0.63
HOXD9-201ENST00000249499 CA7P43166 264 aa18.99■□□□□ 0.63
HOXD9-201ENST00000249499 ARHGDIBP52566 201 aa18.99■□□□□ 0.63
HOXD9-201ENST00000249499 BRWD1-AS2P59051 145 aa18.99■□□□□ 0.63
HOXD9-201ENST00000249499 IZUMO4Q1ZYL8 232 aa18.99■□□□□ 0.63
HOXD9-201ENST00000249499 Q3ZCU0 254 aa18.99■□□□□ 0.63
HOXD9-201ENST00000249499 WFIKKN1Q96NZ8 548 aa18.99■□□□□ 0.63
HOXD9-201ENST00000249499 PRORYQ9H606 182 aa18.99■□□□□ 0.63
HOXD9-201ENST00000249499 LINC00574Q9H8X3 128 aa18.99■□□□□ 0.63
HOXD9-201ENST00000249499 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.99■□□□□ 0.63
HOXD9-201ENST00000249499 CADP27708 2225 aa18.98■□□□□ 0.63
HOXD9-201ENST00000249499 SMG1Q96Q15 3661 aaKnown RBP18.98■□□□□ 0.63
HOXD9-201ENST00000249499 BSNQ9UPA5 3926 aa18.98■□□□□ 0.63
HOXD9-201ENST00000249499 TRGV10A0A0A0MS01 117 aa18.98■□□□□ 0.63
HOXD9-201ENST00000249499 KBTBD11-OT1A0A1B0GTJ5 212 aa18.98■□□□□ 0.63
HOXD9-201ENST00000249499 SIGLEC5O15389 551 aa18.98■□□□□ 0.63
HOXD9-201ENST00000249499 ATP6V0CP27449 155 aa18.98■□□□□ 0.63
HOXD9-201ENST00000249499 CAMLGP49069 296 aa18.98■□□□□ 0.63
HOXD9-201ENST00000249499 FBXL19-AS1Q494R0 122 aa18.98■□□□□ 0.63
HOXD9-201ENST00000249499 NCMAPQ5T1S8 102 aa18.98■□□□□ 0.63
HOXD9-201ENST00000249499 CORO2AQ92828 525 aa18.98■□□□□ 0.63
HOXD9-201ENST00000249499 SH3BGRL3Q9H299 93 aa18.98■□□□□ 0.63
HOXD9-201ENST00000249499 UQCC1Q9NVA1 299 aa18.98■□□□□ 0.63
HOXD9-201ENST00000249499 PSENENQ9NZ42 101 aa18.98■□□□□ 0.63
HOXD9-201ENST00000249499 CLN8Q9UBY8 286 aa18.98■□□□□ 0.63
HOXD9-201ENST00000249499 CARHSP1Q9Y2V2 147 aaKnown RBP18.98■□□□□ 0.63
HOXD9-201ENST00000249499 IGSF10Q6WRI0 2623 aa18.98■□□□□ 0.63
HOXD9-201ENST00000249499 DEFB108AA8MXU0 73 aa18.97■□□□□ 0.63
HOXD9-201ENST00000249499 RBFOX2O43251 390 aaKnown RBP eCLIP18.97■□□□□ 0.63
HOXD9-201ENST00000249499 S1PR2O95136 353 aa18.97■□□□□ 0.63
HOXD9-201ENST00000249499 DUTP33316 252 aaKnown RBP18.97■□□□□ 0.63
HOXD9-201ENST00000249499 TNFRSF9Q07011 255 aa18.97■□□□□ 0.63
HOXD9-201ENST00000249499 C17orf58Q2M2W7 97 aa18.97■□□□□ 0.63
HOXD9-201ENST00000249499 FAM201AQ5SY85 155 aa18.97■□□□□ 0.63
HOXD9-201ENST00000249499 C1orf87Q8N0U7 546 aa18.97■□□□□ 0.63
HOXD9-201ENST00000249499 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.97■□□□□ 0.63
HOXD9-201ENST00000249499 ST6GALNAC3Q8NDV1 305 aa18.97■□□□□ 0.63
HOXD9-201ENST00000249499 LRRC46Q96FV0 321 aa18.97■□□□□ 0.63
HOXD9-201ENST00000249499 C19orf12Q9NSK7 152 aa18.97■□□□□ 0.63
HOXD9-201ENST00000249499 TRGV8A0A0C4DH27 118 aa18.97■□□□□ 0.63
HOXD9-201ENST00000249499 FAM90A9PA6NNJ1 464 aa18.97■□□□□ 0.63
HOXD9-201ENST00000249499 TSPAN15O95858 294 aa18.97■□□□□ 0.63
HOXD9-201ENST00000249499 CD5P06127 495 aa18.97■□□□□ 0.63
HOXD9-201ENST00000249499 UBE2KP61086 200 aa18.97■□□□□ 0.63
HOXD9-201ENST00000249499 ZNF816Q0VGE8 651 aaPredicted RBP18.97■□□□□ 0.63
HOXD9-201ENST00000249499 BTNL3Q6UXE8 466 aa18.97■□□□□ 0.63
HOXD9-201ENST00000249499 SEC11CQ9BY50 192 aa18.97■□□□□ 0.63
HOXD9-201ENST00000249499 TREM1Q9NP99 234 aa18.97■□□□□ 0.63
HOXD9-201ENST00000249499 GFOD1Q9NXC2 390 aa18.97■□□□□ 0.63
HOXD9-201ENST00000249499 CHD6Q8TD26 2715 aa18.96■□□□□ 0.63
HOXD9-201ENST00000249499 NKX6-3A6NJ46 265 aa18.96■□□□□ 0.63
HOXD9-201ENST00000249499 ZNF729A6NN14 1252 aaPredicted RBP18.96■□□□□ 0.63
HOXD9-201ENST00000249499 LINC00473A8K010 186 aa18.96■□□□□ 0.63
HOXD9-201ENST00000249499 KRASP01116 189 aa18.96■□□□□ 0.63
HOXD9-201ENST00000249499 PRH1P02810 166 aa18.96■□□□□ 0.63
HOXD9-201ENST00000249499 G6PCP35575 357 aa18.96■□□□□ 0.63
HOXD9-201ENST00000249499 KIR2DS2P43631 304 aa18.96■□□□□ 0.63
HOXD9-201ENST00000249499 ATRXP46100 2492 aa18.96■□□□□ 0.63
HOXD9-201ENST00000249499 DVL1P1P54792 670 aaPredicted RBP18.96■□□□□ 0.63
HOXD9-201ENST00000249499 HBG1P69891 147 aa18.96■□□□□ 0.63
HOXD9-201ENST00000249499 HBG2P69892 147 aa18.96■□□□□ 0.63
HOXD9-201ENST00000249499 DEFA5Q01523 94 aa18.96■□□□□ 0.63
HOXD9-201ENST00000249499 SVBPQ8N300 66 aa18.96■□□□□ 0.63
HOXD9-201ENST00000249499 TMEM217Q8N7C4 229 aa18.96■□□□□ 0.63
HOXD9-201ENST00000249499 LFNGQ8NES3 379 aa18.96■□□□□ 0.63
HOXD9-201ENST00000249499 OR2G3Q8NGZ4 309 aa18.96■□□□□ 0.63
HOXD9-201ENST00000249499 KCNJ16Q9NPI9 418 aa18.96■□□□□ 0.63
HOXD9-201ENST00000249499 TRAV38-1A0A0B4J264 116 aa18.95■□□□□ 0.62
HOXD9-201ENST00000249499 IFNA5P01569 189 aa18.95■□□□□ 0.62
HOXD9-201ENST00000249499 TLE1Q04724 770 aa18.95■□□□□ 0.62
HOXD9-201ENST00000249499 BTN1A1Q13410 526 aa18.95■□□□□ 0.62
HOXD9-201ENST00000249499 ADAM5Q6NVV9 412 aa18.95■□□□□ 0.62
HOXD9-201ENST00000249499 IFI27L2Q9H2X8 130 aa18.95■□□□□ 0.62
HOXD9-201ENST00000249499 SHISA9B4DS77 424 aa18.94■□□□□ 0.62
HOXD9-201ENST00000249499 RNASEK-C17orf49H0YIS7 233 aa18.94■□□□□ 0.62
HOXD9-201ENST00000249499 LY86O95711 162 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms