RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 NECAP2Q9NVZ3 263 aa16.59■□□□□ 0.25
HCFC1R1-201ENST00000248089 WASHC3Q9Y3C0 194 aa16.59■□□□□ 0.25
HCFC1R1-201ENST00000248089 ATP6V0E1O15342 81 aa16.58■□□□□ 0.24
HCFC1R1-201ENST00000248089 IGF1P05019 195 aa16.58■□□□□ 0.24
HCFC1R1-201ENST00000248089 GSTP1P09211 210 aaKnown RBP16.58■□□□□ 0.24
HCFC1R1-201ENST00000248089 GSTT2P0CG29 244 aa16.58■□□□□ 0.24
HCFC1R1-201ENST00000248089 GSTT2BP0CG30 244 aa16.58■□□□□ 0.24
HCFC1R1-201ENST00000248089 MC5RP33032 325 aa16.58■□□□□ 0.24
HCFC1R1-201ENST00000248089 SERPINB10P48595 397 aa16.58■□□□□ 0.24
HCFC1R1-201ENST00000248089 THBS3P49746 956 aa16.58■□□□□ 0.24
HCFC1R1-201ENST00000248089 CFHR3Q02985 330 aa16.58■□□□□ 0.24
HCFC1R1-201ENST00000248089 KCTD21Q4G0X4 260 aa16.58■□□□□ 0.24
HCFC1R1-201ENST00000248089 FOXB2Q5VYV0 432 aa16.58■□□□□ 0.24
HCFC1R1-201ENST00000248089 SFXN4Q6P4A7 337 aa16.58■□□□□ 0.24
HCFC1R1-201ENST00000248089 MRPL41Q8IXM3 137 aaKnown RBP16.58■□□□□ 0.24
HCFC1R1-201ENST00000248089 NPBQ8NG41 125 aa16.58■□□□□ 0.24
HCFC1R1-201ENST00000248089 OR10J5Q8NHC4 309 aa16.58■□□□□ 0.24
HCFC1R1-201ENST00000248089 RCC1LQ96I51 464 aaKnown RBP16.58■□□□□ 0.24
HCFC1R1-201ENST00000248089 DUX3Q96PT4 197 aa16.58■□□□□ 0.24
HCFC1R1-201ENST00000248089 OR51J1Q9H342 316 aa16.58■□□□□ 0.24
HCFC1R1-201ENST00000248089 WSB1Q9Y6I7 421 aa16.58■□□□□ 0.24
HCFC1R1-201ENST00000248089 IGHV7-81A0A0B4J1V7 117 aa16.57■□□□□ 0.24
HCFC1R1-201ENST00000248089 NDUFA3O95167 84 aa16.57■□□□□ 0.24
HCFC1R1-201ENST00000248089 ELANEP08246 267 aa16.57■□□□□ 0.24
HCFC1R1-201ENST00000248089 OR5H8P0DN80 308 aa16.57■□□□□ 0.24
HCFC1R1-201ENST00000248089 SNRPBP14678 240 aaKnown RBP16.57■□□□□ 0.24
HCFC1R1-201ENST00000248089 SLC6A1P30531 599 aa16.57■□□□□ 0.24
HCFC1R1-201ENST00000248089 SDC2P34741 201 aa16.57■□□□□ 0.24
HCFC1R1-201ENST00000248089 LIN54Q6MZP7 749 aa16.57■□□□□ 0.24
HCFC1R1-201ENST00000248089 REC114Q7Z4M0 266 aa16.57■□□□□ 0.24
HCFC1R1-201ENST00000248089 LGALS14Q8TCE9 139 aa16.57■□□□□ 0.24
HCFC1R1-201ENST00000248089 CABLES2Q9BTV7 478 aa16.57■□□□□ 0.24
HCFC1R1-201ENST00000248089 OR2D2Q9H210 308 aa16.57■□□□□ 0.24
HCFC1R1-201ENST00000248089 FBXL15Q9H469 300 aa16.57■□□□□ 0.24
HCFC1R1-201ENST00000248089 RNF167Q9H6Y7 350 aa16.57■□□□□ 0.24
HCFC1R1-201ENST00000248089 ELF5Q9UKW6 265 aaPredicted RBP16.57■□□□□ 0.24
HCFC1R1-201ENST00000248089 G3V318 75 aa16.56■□□□□ 0.24
HCFC1R1-201ENST00000248089 M0R1X1 148 aa16.56■□□□□ 0.24
HCFC1R1-201ENST00000248089 IGHG4P01861 327 aa16.56■□□□□ 0.24
HCFC1R1-201ENST00000248089 TFAP2AP05549 437 aa16.56■□□□□ 0.24
HCFC1R1-201ENST00000248089 CD36P16671 472 aa16.56■□□□□ 0.24
HCFC1R1-201ENST00000248089 RAB25P57735 213 aa16.56■□□□□ 0.24
HCFC1R1-201ENST00000248089 DEFB136Q30KP8 78 aa16.56■□□□□ 0.24
HCFC1R1-201ENST00000248089 OR5AN1Q8NGI8 311 aa16.56■□□□□ 0.24
HCFC1R1-201ENST00000248089 GINS4Q9BRT9 223 aa16.56■□□□□ 0.24
HCFC1R1-201ENST00000248089 RRHO14718 337 aa16.55■□□□□ 0.24
HCFC1R1-201ENST00000248089 RBBP9O75884 186 aa16.55■□□□□ 0.24
HCFC1R1-201ENST00000248089 APOA2P02652 100 aa16.55■□□□□ 0.24
HCFC1R1-201ENST00000248089 CLEC2LP0C7M8 214 aa16.55■□□□□ 0.24
HCFC1R1-201ENST00000248089 OR8U9P0C7N5 309 aa16.55■□□□□ 0.24
HCFC1R1-201ENST00000248089 MYCNOSP40205 109 aa16.55■□□□□ 0.24
HCFC1R1-201ENST00000248089 LINC00205P59089 165 aa16.55■□□□□ 0.24
HCFC1R1-201ENST00000248089 ARL6IP1Q15041 203 aa16.55■□□□□ 0.24
HCFC1R1-201ENST00000248089 ECSCRQ19T08 205 aa16.55■□□□□ 0.24
HCFC1R1-201ENST00000248089 CDNFQ49AH0 187 aa16.55■□□□□ 0.24
HCFC1R1-201ENST00000248089 RNF152Q8N8N0 203 aa16.55■□□□□ 0.24
HCFC1R1-201ENST00000248089 ZNF383Q8NA42 475 aa16.55■□□□□ 0.24
HCFC1R1-201ENST00000248089 OR8U1Q8NH10 309 aa16.55■□□□□ 0.24
HCFC1R1-201ENST00000248089 ABHD5Q8WTS1 349 aa16.55■□□□□ 0.24
HCFC1R1-201ENST00000248089 AURKAIP1Q9NWT8 199 aaPredicted RBP16.55■□□□□ 0.24
HCFC1R1-201ENST00000248089 ZNF580Q9UK33 172 aa16.55■□□□□ 0.24
HCFC1R1-201ENST00000248089 RBM7Q9Y580 266 aaKnown RBP16.55■□□□□ 0.24
HCFC1R1-201ENST00000248089 TRBV6-7A0A0A0MS04 114 aa16.54■□□□□ 0.24
HCFC1R1-201ENST00000248089 TRAV41A0A0B4J266 112 aa16.54■□□□□ 0.24
HCFC1R1-201ENST00000248089 PROP1O75360 226 aa16.54■□□□□ 0.24
HCFC1R1-201ENST00000248089 DUS4LO95620 317 aaKnown RBP16.54■□□□□ 0.24
HCFC1R1-201ENST00000248089 NDPQ00604 133 aa16.54■□□□□ 0.24
HCFC1R1-201ENST00000248089 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.54■□□□□ 0.24
HCFC1R1-201ENST00000248089 MRAPQ8TCY5 172 aa16.54■□□□□ 0.24
HCFC1R1-201ENST00000248089 RAX2Q96IS3 184 aa16.54■□□□□ 0.24
HCFC1R1-201ENST00000248089 CENPOQ9BU64 300 aa16.54■□□□□ 0.24
HCFC1R1-201ENST00000248089 A3GALT2U3KPV4 340 aa16.54■□□□□ 0.24
HCFC1R1-201ENST00000248089 TMEM235A6NFC5 223 aa16.53■□□□□ 0.24
HCFC1R1-201ENST00000248089 CCL24O00175 119 aa16.53■□□□□ 0.24
HCFC1R1-201ENST00000248089 IGKV1-16P04430 117 aa16.53■□□□□ 0.24
HCFC1R1-201ENST00000248089 PSMB8P28062 276 aa16.53■□□□□ 0.24
HCFC1R1-201ENST00000248089 TMEM65Q6PI78 240 aa16.53■□□□□ 0.24
HCFC1R1-201ENST00000248089 NUDCD2Q8WVJ2 157 aa16.53■□□□□ 0.24
HCFC1R1-201ENST00000248089 CLCC1Q96S66 551 aa16.53■□□□□ 0.24
HCFC1R1-201ENST00000248089 P2RX4Q99571 388 aa16.53■□□□□ 0.24
HCFC1R1-201ENST00000248089 ST6GALNAC5Q9BVH7 336 aa16.53■□□□□ 0.24
HCFC1R1-201ENST00000248089 TOLLIPQ9H0E2 274 aa16.53■□□□□ 0.24
HCFC1R1-201ENST00000248089 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.53■□□□□ 0.24
HCFC1R1-201ENST00000248089 METTL1Q9UBP6 276 aaKnown RBP16.53■□□□□ 0.24
HCFC1R1-201ENST00000248089 FBXO7Q9Y3I1 522 aa16.53■□□□□ 0.24
HCFC1R1-201ENST00000248089 DNAH3Q8TD57 4116 aa16.52■□□□□ 0.24
HCFC1R1-201ENST00000248089 IGKV1D-8A0A087WSZ0 117 aa16.52■□□□□ 0.24
HCFC1R1-201ENST00000248089 SCGNO76038 276 aa16.52■□□□□ 0.24
HCFC1R1-201ENST00000248089 DIRAS3O95661 229 aa16.52■□□□□ 0.24
HCFC1R1-201ENST00000248089 DTYMKP23919 212 aa16.52■□□□□ 0.24
HCFC1R1-201ENST00000248089 HOXD3P31249 432 aaPredicted RBP16.52■□□□□ 0.24
HCFC1R1-201ENST00000248089 CDX1P47902 265 aaPredicted RBP16.52■□□□□ 0.24
HCFC1R1-201ENST00000248089 GNG2P59768 71 aa16.52■□□□□ 0.24
HCFC1R1-201ENST00000248089 RPS16P62249 146 aaKnown RBP16.52■□□□□ 0.24
HCFC1R1-201ENST00000248089 IDNKQ5T6J7 187 aa16.52■□□□□ 0.24
HCFC1R1-201ENST00000248089 HACD4Q5VWC8 232 aa16.52■□□□□ 0.24
HCFC1R1-201ENST00000248089 PDPNQ86YL7 162 aa16.52■□□□□ 0.24
HCFC1R1-201ENST00000248089 TSNAXQ99598 290 aaKnown RBP16.52■□□□□ 0.24
HCFC1R1-201ENST00000248089 SLC35D1Q9NTN3 355 aa16.52■□□□□ 0.24
HCFC1R1-201ENST00000248089 SDHAF2Q9NX18 166 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms